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The map label for this gene is oppB [C]

Identifier: 146341509

GI number: 146341509

Start: 4796907

End: 4797482

Strand: Reverse

Name: oppB [C]

Synonym: BRADO4604

Alternate gene names: 146341509

Gene position: 4797482-4796907 (Counterclockwise)

Preceding gene: 146341510

Following gene: 146341508

Centisome position: 64.34

GC content: 65.45

Gene sequence:

>576_bases
TTGCCGCAGGGCAGCGCGGCTGACACCATCACCAGCATCGTCGCCTATCTCGGCGTCTCGCTGCCGGAGTTCGTCACCGC
GACGGTGCTGGCGATGCTGCTCACTGACGTCCTGCCGTGGTTGCCCGCCACCGGTTACGTGTCGCCGCTCGAGGACTCCG
GCCTCGCACTGCGCCACCTCGCGCTTCCCGTTCTGACGGTCTCGGTCATCCTGGTCGCCCATGTCATGCGCATGATGCGC
TCGGAGACTCTGGACGTTCTGCAATCGGACTACGTCCGCGCGGCGCGGCGAAGGGGCTGCCGGAGCGGACGGTGCTGGTC
CGCCACGTCTTGCGCAACGCGCTGTTGCCGGTCATCACCATCGTTGCGCTCAACGTCGGCTATCTGCTCGGAGGCATCAT
GTGATCGAGGAGATCTTAGCCATTCCCGGGATCGGCCGTGCGCTGATGATCGCGATCACCACCCGCGATCTGCCGTCGAT
CCAGGCCGGCGCGATGATCATGGCCGTGACCTACGCGATCACCAACACGCTCGCGGACGTTGTCTACGCGCTGCTCGACC
GGCGAATCCGTTATGA

Upstream 100 bases:

>100_bases
TCGTTCCGGCTAAGATCATCGCCAGCGATCTCGGCAGCCTCGCCGCTGGCCGCTGGGGCACTCGTCGTCACGCTGCCCGT
CGCCGTTCCGCTCGGCATGT

Downstream 100 bases:

>100_bases
CTGAGCCGCTGGTGCGCATGATCCGCAAGCCGCAGGGTGCAATTGGCATCGTTCTGCTGGCCGTGCTTGCCGTGGTCTGC
CTCCTTGGACCATGGCTCGC

Product: putative ABC transporter permease (fragment)

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPQGSAADTITSIVAYLGVSLPEFVTATVLAMLLTDVLPWLPATGYVSPLEDSGLALRHLALPVLTVSVILVAHVMRMMR
SETLDVLQSDYVRAARRRGCRSGRCWSATSCATRCCRSSPSLRSTSAICSEASCDRGDLSHSRDRPCADDRDHHPRSAVD
PGRRDDHGRDLRDHQHARGRCLRAARPANPL

Sequences:

>Translated_191_residues
MPQGSAADTITSIVAYLGVSLPEFVTATVLAMLLTDVLPWLPATGYVSPLEDSGLALRHLALPVLTVSVILVAHVMRMMR
SETLDVLQSDYVRAARRRGCRSGRCWSATSCATRCCRSSPSLRSTSAICSEASCDRGDLSHSRDRPCADDRDHHPRSAVD
PGRRDDHGRDLRDHQHARGRCLRAARPANPL
>Mature_190_residues
PQGSAADTITSIVAYLGVSLPEFVTATVLAMLLTDVLPWLPATGYVSPLEDSGLALRHLALPVLTVSVILVAHVMRMMRS
ETLDVLQSDYVRAARRRGCRSGRCWSATSCATRCCRSSPSLRSTSAICSEASCDRGDLSHSRDRPCADDRDHHPRSAVDP
GRRDDHGRDLRDHQHARGRCLRAARPANPL

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=100, Percent_Identity=32, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 20856; Mature: 20725

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQGSAADTITSIVAYLGVSLPEFVTATVLAMLLTDVLPWLPATGYVSPLEDSGLALRHL
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
ALPVLTVSVILVAHVMRMMRSETLDVLQSDYVRAARRRGCRSGRCWSATSCATRCCRSSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
SLRSTSAICSEASCDRGDLSHSRDRPCADDRDHHPRSAVDPGRRDDHGRDLRDHQHARGR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
CLRAARPANPL
HHHHCCCCCCC
>Mature Secondary Structure 
PQGSAADTITSIVAYLGVSLPEFVTATVLAMLLTDVLPWLPATGYVSPLEDSGLALRHL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
ALPVLTVSVILVAHVMRMMRSETLDVLQSDYVRAARRRGCRSGRCWSATSCATRCCRSSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
SLRSTSAICSEASCDRGDLSHSRDRPCADDRDHHPRSAVDPGRRDDHGRDLRDHQHARGR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
CLRAARPANPL
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA