| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341481
Identifier: 146341481
GI number: 146341481
Start: 4769791
End: 4770807
Strand: Reverse
Name: 146341481
Synonym: BRADO4574
Alternate gene names: NA
Gene position: 4770807-4769791 (Counterclockwise)
Preceding gene: 146341483
Following gene: 146341477
Centisome position: 63.98
GC content: 69.42
Gene sequence:
>1017_bases ATGTCCGACACCACATCGACCACCCCGACCGCCTTGGTTCTCGGCCTGACCGGCGCGATCGGCGGCGCCATCGCGGCGAG CCTGGCGCGGCGCGGCTTCGCCATCCGCGCGCTGACCCGCCGCCCGGCCGCAGACCGGCCGTCGCTCGCCTTTCCCGTCG ACTGGCGTGACGGCGATGCGCGCGACGCAGCCTCCGTGCGCGCGGCCGCCGAGGGGGCCAGCCTGATCGTCCACGGCGTC AATCCGCCCGGCTATGCGCGCTGGCGCGAGGAGGCGCTGCCGATGCTCGCCAACACCATTGCGGCGGCGAAAGCCGTCGG CGCGACAATCCTGTTTCCGGGCAATGTCTACGTCTACTCGTCAGCATCGCCGGCGGTTGTCAGCGAGTCTACGCCGCGCC GGCCGACGACGCGCAAGGGCCGGGTGCGGCTGGAGATGGAGGAGATGCTGGAGCAGGCGGCGCGCGACCACGGCGTCCGC GTCATCGCCCTCAGGGCCGGCGACTTCTTCGGCCCCGGCGTGACGAATTCCTGGTTCGCGCAGGCGCTGGCGAAGGGCGG CATGGCCGCGACATCCGTTCAGCGCCTGACACGACCCGGCATCGGGCATGCCTGGGCCTATGTGCCGGATCTCGCCGAGA CGTTTGCGCGGCTCGTCGACATCCGCGCGGAGCTGCCAGCCTACACGATGCTGAATTTCGCCGGCCACTACGATGCGACG GGCCACGACATGACGGATGCGGTGCGACGTGTCCTCGGCCGGCCTGATCTGCCGGTGAAGCCGTTCCCCTGGATCATCCT CTGGCTCGCCGCGCCATTCGTCGGCTTCATGCGCGAGGCGCTTGAGATGAGGTGGCTGTGGACGCAGAGCCTCGCGCTAA ACAATGACCGGCTGGTCGGGTTGCTCGCGGCAGAGCCGCATACGGCACTGGATGAGGCGGTGAGGGCGGCGCTGAGAGGA CTGGATGAACTCATCGTTCCCAGACACGGACCAAGCCATGATGCTCAGGTCCGATGA
Upstream 100 bases:
>100_bases ATCTCGTGCATAAGAAAATGTATAGCGGCTAAAGAATGTTTGGCAATTTTCGTTTTGCGACGGCCGGTCCAGCTTGCTGG ACACAGCAAGGAGATCAGCC
Downstream 100 bases:
>100_bases GACTCGCGTCGCCTATAAAAGAGCGCTCGTGCCGCGGGGACGAGCTGCAAAAGCGGGTCGTAGTCAGCAACGTTTGCGGT CAGAACGACGAGGCCCAGTT
Product: putative nucleoside-diphosphate-sugar epimerases
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; Epimerase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSDTTSTTPTALVLGLTGAIGGAIAASLARRGFAIRALTRRPAADRPSLAFPVDWRDGDARDAASVRAAAEGASLIVHGV NPPGYARWREEALPMLANTIAAAKAVGATILFPGNVYVYSSASPAVVSESTPRRPTTRKGRVRLEMEEMLEQAARDHGVR VIALRAGDFFGPGVTNSWFAQALAKGGMAATSVQRLTRPGIGHAWAYVPDLAETFARLVDIRAELPAYTMLNFAGHYDAT GHDMTDAVRRVLGRPDLPVKPFPWIILWLAAPFVGFMREALEMRWLWTQSLALNNDRLVGLLAAEPHTALDEAVRAALRG LDELIVPRHGPSHDAQVR
Sequences:
>Translated_338_residues MSDTTSTTPTALVLGLTGAIGGAIAASLARRGFAIRALTRRPAADRPSLAFPVDWRDGDARDAASVRAAAEGASLIVHGV NPPGYARWREEALPMLANTIAAAKAVGATILFPGNVYVYSSASPAVVSESTPRRPTTRKGRVRLEMEEMLEQAARDHGVR VIALRAGDFFGPGVTNSWFAQALAKGGMAATSVQRLTRPGIGHAWAYVPDLAETFARLVDIRAELPAYTMLNFAGHYDAT GHDMTDAVRRVLGRPDLPVKPFPWIILWLAAPFVGFMREALEMRWLWTQSLALNNDRLVGLLAAEPHTALDEAVRAALRG LDELIVPRHGPSHDAQVR >Mature_337_residues SDTTSTTPTALVLGLTGAIGGAIAASLARRGFAIRALTRRPAADRPSLAFPVDWRDGDARDAASVRAAAEGASLIVHGVN PPGYARWREEALPMLANTIAAAKAVGATILFPGNVYVYSSASPAVVSESTPRRPTTRKGRVRLEMEEMLEQAARDHGVRV IALRAGDFFGPGVTNSWFAQALAKGGMAATSVQRLTRPGIGHAWAYVPDLAETFARLVDIRAELPAYTMLNFAGHYDATG HDMTDAVRRVLGRPDLPVKPFPWIILWLAAPFVGFMREALEMRWLWTQSLALNNDRLVGLLAAEPHTALDEAVRAALRGL DELIVPRHGPSHDAQVR
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36437; Mature: 36306
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTTSTTPTALVLGLTGAIGGAIAASLARRGFAIRALTRRPAADRPSLAFPVDWRDGDA CCCCCCCCCHHHEEHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCEEEEECCCCCCC RDAASVRAAAEGASLIVHGVNPPGYARWREEALPMLANTIAAAKAVGATILFPGNVYVYS HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEC SASPAVVSESTPRRPTTRKGRVRLEMEEMLEQAARDHGVRVIALRAGDFFGPGVTNSWFA CCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHH QALAKGGMAATSVQRLTRPGIGHAWAYVPDLAETFARLVDIRAELPAYTMLNFAGHYDAT HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC GHDMTDAVRRVLGRPDLPVKPFPWIILWLAAPFVGFMREALEMRWLWTQSLALNNDRLVG CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLAAEPHTALDEAVRAALRGLDELIVPRHGPSHDAQVR EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SDTTSTTPTALVLGLTGAIGGAIAASLARRGFAIRALTRRPAADRPSLAFPVDWRDGDA CCCCCCCCHHHEEHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCEEEEECCCCCCC RDAASVRAAAEGASLIVHGVNPPGYARWREEALPMLANTIAAAKAVGATILFPGNVYVYS HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEC SASPAVVSESTPRRPTTRKGRVRLEMEEMLEQAARDHGVRVIALRAGDFFGPGVTNSWFA CCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHH QALAKGGMAATSVQRLTRPGIGHAWAYVPDLAETFARLVDIRAELPAYTMLNFAGHYDAT HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC GHDMTDAVRRVLGRPDLPVKPFPWIILWLAAPFVGFMREALEMRWLWTQSLALNNDRLVG CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLAAEPHTALDEAVRAALRGLDELIVPRHGPSHDAQVR EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA