| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341369
Identifier: 146341369
GI number: 146341369
Start: 4655558
End: 4657147
Strand: Reverse
Name: 146341369
Synonym: BRADO4455
Alternate gene names: NA
Gene position: 4657147-4655558 (Counterclockwise)
Preceding gene: 146341370
Following gene: 146341368
Centisome position: 62.46
GC content: 68.3
Gene sequence:
>1590_bases CTGCAAGCCGACCTCGTCATCGCCGGCGGCGGCCTCGCCGGCATCGTCACCGCGCTCGAGGCTTTGCGCGCCGGCAACTC CGTCGTAATCGTCGATCGCGATACGCCGGAGCGGTTCGGTGGACTGGCGCTGTGGGCCTTCGGAGGCATGGCGCTGGTCG GCACGCCCTTGCAGGCGCGGATGAAGATCCCGGACACGCCGGAGATCGCGCTGCGCGACTGGATCCGGTTCGGCGAGCTC GACGAGCGCGAGCACTGGCCGTTGCAGTGGGCGCGCTATTACGTCGAGCATTCGCGGAGCGAGATCTACGACTGGCTGTC GTCGCACGGCGTGACCTTTATGCCCGCCGTGAACTGGGTCGAGCGCGGCCTCGTGGGCGACGGCAACGCGCTGCCGCGCT ATCACATCGTCTGGGGCACCTCGCAGCGGCTGACGCGCGTGATGATCGCCGCGATGCGCGCCGCCGATCGCGGCGGCAAG CTGACGGTGCTGCATCGTCATCGCGTGGTCGGCCTCGATCGGGCGGGCGGAGCTATGGCGGGCGTCATCGCCGTCAATGA GGATAGCGGTGCCGAGATCCGCATCGCTGCGCCGCTGACGGTGCTCGCCATGGGCGGCATCAATGGCGGCCATGCGGAGG CGCGCGCCAACTGGGTGAAGGGACGGCCGATGCCGTCCGCCATGCTCAACGGCGCGCACCCGTTCGCCGACGGCAAGCTG CATCATCACGCGGCCGAGACCATCGGCGCGCAGATCACCCATGCCGGCGAAATGTGGAACTACGCCGCCGGAATTCCGCA TCCGTTTCCGCATTTCGACGGTCACGGCCTGTCGCTGGTGCCGTGCAAATCGGCGCTGTGGCTCGACCATCGCGGCGAGC GCATCGGCCCGCAGCCGCTGGTCACCGGCTTCGACACCTACGATCTGTGCCAGCGCGTCGCCGCGCAGGAGAAGCCGTAT ACGTGGCACCTGTTGAACTGGCGGATTGCCGCCAAGGAGTTCGCGATCTCGGGCGCCGAGCACAATGCGCGCATCCGCGA GCGGCAGATGCCGATGTTCCTCAAGGAGACGTTGCTCGGCAATCACCGCCTGGTCCGGCAGATGCAGCGCGAGAGCCGGC ATTTCCTGGTCGACGAGACGCTGGCGGGCCTTGCCGCCAAGATGAACGCGTTCACCGGCACCGACGACATCAAGCCCGAG GTGCTGCAGGCGACCGCCGATGCCTTCGATGCGAACTTCGAGAACGGCGACAAGCTCTTCAACGACGACCAGCTGCGCCG CATCCTGCACGCGCGGCAATGGGGACCCGACAAGCTGCGCACCTGCAAGCCGGCGCCGCTGCAGATGCGCGGGGCCGGGC CGTTCATCGCGATCCACATGCAGCTGATCACCCGCAAGAGCCTCGGCGGCCTGAAGACCGATCTGCACAGCCGGCTGCTC GACGCCGCGGGCAGCCCGATCAGCGGCCTCTACGCCGTCGGCGAAGCCGCGGGCTTCGGGGGCGGTGGCGCCTCGGGCAA GCGCTCGCTGGAGGGAACATTTCTGCCCGGCTGCATCCTCACGGCAAAGGCAGCGGTAAAGGCGATGTGA
Upstream 100 bases:
>100_bases CTGAAGCTGCTGCCGCATCTGCTGGGATCGCTCGACCGCGTGCCGCTGCCGGTGGCGCGCATGCTCAAGCGCAAGATTGC GCCGTGACATGAGCGCGCCG
Downstream 100 bases:
>100_bases GGAGCGCGAGGGCAACGAGCGATGTTCCTCAAGACAGGCGCGTCGCTTAGTGAGGGGCAGGATCTCTCCGCACGTCATTC CGGGGCGCACCGTAATGACG
Product: putative fumarate reductase flavoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MQADLVIAGGGLAGIVTALEALRAGNSVVIVDRDTPERFGGLALWAFGGMALVGTPLQARMKIPDTPEIALRDWIRFGEL DEREHWPLQWARYYVEHSRSEIYDWLSSHGVTFMPAVNWVERGLVGDGNALPRYHIVWGTSQRLTRVMIAAMRAADRGGK LTVLHRHRVVGLDRAGGAMAGVIAVNEDSGAEIRIAAPLTVLAMGGINGGHAEARANWVKGRPMPSAMLNGAHPFADGKL HHHAAETIGAQITHAGEMWNYAAGIPHPFPHFDGHGLSLVPCKSALWLDHRGERIGPQPLVTGFDTYDLCQRVAAQEKPY TWHLLNWRIAAKEFAISGAEHNARIRERQMPMFLKETLLGNHRLVRQMQRESRHFLVDETLAGLAAKMNAFTGTDDIKPE VLQATADAFDANFENGDKLFNDDQLRRILHARQWGPDKLRTCKPAPLQMRGAGPFIAIHMQLITRKSLGGLKTDLHSRLL DAAGSPISGLYAVGEAAGFGGGGASGKRSLEGTFLPGCILTAKAAVKAM
Sequences:
>Translated_529_residues MQADLVIAGGGLAGIVTALEALRAGNSVVIVDRDTPERFGGLALWAFGGMALVGTPLQARMKIPDTPEIALRDWIRFGEL DEREHWPLQWARYYVEHSRSEIYDWLSSHGVTFMPAVNWVERGLVGDGNALPRYHIVWGTSQRLTRVMIAAMRAADRGGK LTVLHRHRVVGLDRAGGAMAGVIAVNEDSGAEIRIAAPLTVLAMGGINGGHAEARANWVKGRPMPSAMLNGAHPFADGKL HHHAAETIGAQITHAGEMWNYAAGIPHPFPHFDGHGLSLVPCKSALWLDHRGERIGPQPLVTGFDTYDLCQRVAAQEKPY TWHLLNWRIAAKEFAISGAEHNARIRERQMPMFLKETLLGNHRLVRQMQRESRHFLVDETLAGLAAKMNAFTGTDDIKPE VLQATADAFDANFENGDKLFNDDQLRRILHARQWGPDKLRTCKPAPLQMRGAGPFIAIHMQLITRKSLGGLKTDLHSRLL DAAGSPISGLYAVGEAAGFGGGGASGKRSLEGTFLPGCILTAKAAVKAM >Mature_529_residues MQADLVIAGGGLAGIVTALEALRAGNSVVIVDRDTPERFGGLALWAFGGMALVGTPLQARMKIPDTPEIALRDWIRFGEL DEREHWPLQWARYYVEHSRSEIYDWLSSHGVTFMPAVNWVERGLVGDGNALPRYHIVWGTSQRLTRVMIAAMRAADRGGK LTVLHRHRVVGLDRAGGAMAGVIAVNEDSGAEIRIAAPLTVLAMGGINGGHAEARANWVKGRPMPSAMLNGAHPFADGKL HHHAAETIGAQITHAGEMWNYAAGIPHPFPHFDGHGLSLVPCKSALWLDHRGERIGPQPLVTGFDTYDLCQRVAAQEKPY TWHLLNWRIAAKEFAISGAEHNARIRERQMPMFLKETLLGNHRLVRQMQRESRHFLVDETLAGLAAKMNAFTGTDDIKPE VLQATADAFDANFENGDKLFNDDQLRRILHARQWGPDKLRTCKPAPLQMRGAGPFIAIHMQLITRKSLGGLKTDLHSRLL DAAGSPISGLYAVGEAAGFGGGGASGKRSLEGTFLPGCILTAKAAVKAM
Specific function: Able to catalyze the elimination of the C-1 and C-2 hydrogen atoms of the A-ring from the polycyclic ring structure of 3-ketosteroids, but the ketosteroid dehydrogenase activity is low compared to KsdD in the cholesterol degradation process. The low activ
COG id: COG3573
COG function: function code R; Predicted oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57650; Mature: 57650
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQADLVIAGGGLAGIVTALEALRAGNSVVIVDRDTPERFGGLALWAFGGMALVGTPLQAR CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCEEEEHHCCEEEECCCHHHE MKIPDTPEIALRDWIRFGELDEREHWPLQWARYYVEHSRSEIYDWLSSHGVTFMPAVNWV ECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHH ERGLVGDGNALPRYHIVWGTSQRLTRVMIAAMRAADRGGKLTVLHRHRVVGLDRAGGAMA HCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCEE GVIAVNEDSGAEIRIAAPLTVLAMGGINGGHAEARANWVKGRPMPSAMLNGAHPFADGKL EEEEEECCCCCEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCH HHHAAETIGAQITHAGEMWNYAAGIPHPFPHFDGHGLSLVPCKSALWLDHRGERIGPQPL HHHHHHHHHHHHEEHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCC VTGFDTYDLCQRVAAQEKPYTWHLLNWRIAAKEFAISGAEHNARIRERQMPMFLKETLLG EECCCHHHHHHHHHHCCCCCEEEEEEEEEEHHHHEECCCCCCCHHHHHHCCHHHHHHHHC NHRLVRQMQRESRHFLVDETLAGLAAKMNAFTGTDDIKPEVLQATADAFDANFENGDKLF CHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC NDDQLRRILHARQWGPDKLRTCKPAPLQMRGAGPFIAIHMQLITRKSLGGLKTDLHSRLL CHHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHCCCHHHHHHHHHH DAAGSPISGLYAVGEAAGFGGGGASGKRSLEGTFLPGCILTAKAAVKAM HHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MQADLVIAGGGLAGIVTALEALRAGNSVVIVDRDTPERFGGLALWAFGGMALVGTPLQAR CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCEEEEHHCCEEEECCCHHHE MKIPDTPEIALRDWIRFGELDEREHWPLQWARYYVEHSRSEIYDWLSSHGVTFMPAVNWV ECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHH ERGLVGDGNALPRYHIVWGTSQRLTRVMIAAMRAADRGGKLTVLHRHRVVGLDRAGGAMA HCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCEE GVIAVNEDSGAEIRIAAPLTVLAMGGINGGHAEARANWVKGRPMPSAMLNGAHPFADGKL EEEEEECCCCCEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCH HHHAAETIGAQITHAGEMWNYAAGIPHPFPHFDGHGLSLVPCKSALWLDHRGERIGPQPL HHHHHHHHHHHHEEHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCC VTGFDTYDLCQRVAAQEKPYTWHLLNWRIAAKEFAISGAEHNARIRERQMPMFLKETLLG EECCCHHHHHHHHHHCCCCCEEEEEEEEEEHHHHEECCCCCCCHHHHHHCCHHHHHHHHC NHRLVRQMQRESRHFLVDETLAGLAAKMNAFTGTDDIKPEVLQATADAFDANFENGDKLF CHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC NDDQLRRILHARQWGPDKLRTCKPAPLQMRGAGPFIAIHMQLITRKSLGGLKTDLHSRLL CHHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHCCCHHHHHHHHHH DAAGSPISGLYAVGEAAGFGGGGASGKRSLEGTFLPGCILTAKAAVKAM HHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA