| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341295
Identifier: 146341295
GI number: 146341295
Start: 4565906
End: 4568464
Strand: Reverse
Name: 146341295
Synonym: BRADO4376
Alternate gene names: NA
Gene position: 4568464-4565906 (Counterclockwise)
Preceding gene: 146341296
Following gene: 146341294
Centisome position: 61.27
GC content: 66.71
Gene sequence:
>2559_bases TTGAAGGCGCTGAGCTACCGCGCCGGAACCTACCGGCAGTTCAAGGACACGATGCTGGGGCGCCTCGGCAGCAGCGCGGC AGGCCTGCGCAGCCGGCAGGATACCGACTTCTCCATTGCGCTGCTCGATGCCTTTGCCTGCACGGCGGACACGCTGACCT TCTATCAGGAGCGCATCGCCAATGAGTGCTATCTCTCGACGGCCACCGAGCGGCGCTCGTTGGTCGAGCTTGGGCGGTTG ATCGATTACGAGCCGCGTCCCGGCGTGGCGGCAAATGCCCATCTCGCTTTCACGGTGGAAGACGCTCCCGGCGCGCCCGA GCATGCCGCATCGCCGGTTGCGATCGCGGCCGGCGTGAAGGTGCAGAGCATCCCGGGTCCTGGCGAACTGCCGAAGACGT TCGAGACCGTGGAGCCGATCGTCGCGCATCCCGAATGGAACGCGATGCGGCCGCAGCTCACCGAGCCGCAGCTCATCTCC ACGGACATGCGCGCGGTGCTGCTGAAGGGGACCAGCAGCAGCCTCAAGCCGGGGGACCGCATTCTGATCGTCGAGAGCGA AGATCCGTCGCAGCGCATCGCACTCGAGGTCGTCACCGTGAAGGCGCAACCCGAGAGCGGCACGACCTCGGTGACCCTGG CTTACAACCCGCCGGAGCCCCGACGCTGGCGCTGGCCGCGACGGCCGATCCACGTCTTCGGGCCGGAGCTGATCAGCCTC ACAACCCTGCAAGTCAACACCAACGTCATGAGCTATCGGTGGCGTCAGGCGGATCTCGACGCGTTCGCACGCGTGCAGGG TTGGTCCCACCGCGCCCTGATGCGGAACATCAGATGGCAGGTCGCGCATCGGATATTCCAGCCGGAGGCAGGTGTGTTCT CGTTTCGCGAGCGGGCCGGCATCTATGGTCATAATGCGCCGAAGCCCGGCGCCAACAATACGCCGGGACTGCCGGACGGC AAGACGCTGGCTGACGAGGCCGGTGCGAACATGGAGCGCGCGATCGATCTCGACCGCACCTACCCCGAGATCATCCCGGG AAGCTGGCTGCTGCTGAAGAGCCCGACCAGTGAGCACATCATTGAGCAGGTCGAGGACAGCCTCGAATTGTCACGCGCCG ATTATGGCTTGAGCGGAAAAGTCACGCGCCTGCTGCTGAACTCGGATGACAGCTTTAGCGGGCTTGCGGTCCGCGAGACG ACGGTGTTCGCCGGCAGCCAGCGACTCGATCTCGCGGAACTGCCGGTCGTCGACGACGTCGAGGGCAACCGCGTCACGCT CGAGACCGTCTATCTTGGACTTCAGGTCGGGCAGAATGTCGTCGTCACGGGTGAGCGCTCCGATCTGGCGGGGGTCGTCG ACCACGAGGTGATGACCCTGGCCGAGGTCGAGTTCAGCGACGGACGCACCACCCTGGTGTTCTCGCAGGATCTGTCCGGA AGCTATCTGCGCGACACCGTGACCATCAATGCCAACGTCGCACGCGCCACGCATGGCGAGACGGTGCAGGAGACGCTGGG CGGCGGCAATGCTTCGCTCGCCAACCAGGCTTTCATGCTGCGGCAGCCGCCGGTCACCCATGTCAGCAGCAATTCGCCGA CCGGGAGCAGTTCGACCCTGCAGGTCCGGGTCAATGACCTCGCCTGGCAGGAGGTGCCGAACCTGTTCAACCGTGCGCCC GAGGACCGCGTCTATGTCACGCAGATCGGCGACGACGGCTCGACGACGGTGCAGTTCGGGGACGGCATCAACGGCGCCCG TCCGCCCACCGGCCTCGACAATGTTCGCGCCACCTACCGCAAAGGCATCGGCAAGGGCGGCAACCTCGACGCCGGCAAGC TGAGCCTGTTGCTCACGCGGCCGGCCGGCGTGCGGAACGTGGTCAATCCGCTGCCCGCGAGCGGCGGCGCCGATCCCGAG ACCGCCGACAGCATCCGGCGCAACGCGCCGCTGACGATCATGACGATGGACCGCATCGTCTCGCTGCAGGACTACGAGGA TTTCGCACGCGCTTTCGCCGGCATCGAGAAGGCGATGGCGGTGCCTTGGGCCTCGACCGGGCAGGCGCCTGGCGTCTTCA TCACGGTCGCAGGGCCGGACGGCGCCAGCGTCGATCCCGGCAGCCCGATCATGGTCAATCTGTTGGCCGCAATCCGGTCT GGCTCGGCGCCGCATGTGCCGCTCGAGGTGAGGTCCTATCGCAGGGCTTACTTCGAGGTCACCGCGACGATCATGGTCCA GGCCGACCATGAGACCGATCCGGTCGTCGCCGCCGTCGAGGCCGCGTTGCGCGTCAGCTTCTCCTTCGATGCGCGCGCGT TCGGCCAGCCGGTGATGTTGAGCGAAGTGATGGCGGTGATGCAGGCCGTGCCGGGCGTCATCGCGGTCGATGTCGATCAG CTCAGCCGCATCGACGATCATCATCGCCGCAGGGAGCTGCTGCCGCCGGCCGCGATTGCCGCCGCCACGGCGGAGATCCG GCGGGACGGCAGCCTGCTGGCGGCCGAGCTGCTGACGCTCGATCCGCGTCCGGTGCATCTCAGGGGAGAGCGGCGATGA
Upstream 100 bases:
>100_bases AATGAGCAGCACATCGCGAGACGCTCACCCTCCGGAGTGTCCCTGCTGCGGCGAAAGCGCTGCAGCCCGAACGCCGGTCG AGATCTTCAATCGGCCCGGC
Downstream 100 bases:
>100_bases GCTTCGACGCGCAGACGATCTATGACCTGCTCCCTGCGATCTATCGCACGCGTGATGCGGAGCAGGGTGGCGCGCTCCGA CAGCTGATCGGTGTGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 852; Mature: 852
Protein sequence:
>852_residues MKALSYRAGTYRQFKDTMLGRLGSSAAGLRSRQDTDFSIALLDAFACTADTLTFYQERIANECYLSTATERRSLVELGRL IDYEPRPGVAANAHLAFTVEDAPGAPEHAASPVAIAAGVKVQSIPGPGELPKTFETVEPIVAHPEWNAMRPQLTEPQLIS TDMRAVLLKGTSSSLKPGDRILIVESEDPSQRIALEVVTVKAQPESGTTSVTLAYNPPEPRRWRWPRRPIHVFGPELISL TTLQVNTNVMSYRWRQADLDAFARVQGWSHRALMRNIRWQVAHRIFQPEAGVFSFRERAGIYGHNAPKPGANNTPGLPDG KTLADEAGANMERAIDLDRTYPEIIPGSWLLLKSPTSEHIIEQVEDSLELSRADYGLSGKVTRLLLNSDDSFSGLAVRET TVFAGSQRLDLAELPVVDDVEGNRVTLETVYLGLQVGQNVVVTGERSDLAGVVDHEVMTLAEVEFSDGRTTLVFSQDLSG SYLRDTVTINANVARATHGETVQETLGGGNASLANQAFMLRQPPVTHVSSNSPTGSSSTLQVRVNDLAWQEVPNLFNRAP EDRVYVTQIGDDGSTTVQFGDGINGARPPTGLDNVRATYRKGIGKGGNLDAGKLSLLLTRPAGVRNVVNPLPASGGADPE TADSIRRNAPLTIMTMDRIVSLQDYEDFARAFAGIEKAMAVPWASTGQAPGVFITVAGPDGASVDPGSPIMVNLLAAIRS GSAPHVPLEVRSYRRAYFEVTATIMVQADHETDPVVAAVEAALRVSFSFDARAFGQPVMLSEVMAVMQAVPGVIAVDVDQ LSRIDDHHRRRELLPPAAIAAATAEIRRDGSLLAAELLTLDPRPVHLRGERR
Sequences:
>Translated_852_residues MKALSYRAGTYRQFKDTMLGRLGSSAAGLRSRQDTDFSIALLDAFACTADTLTFYQERIANECYLSTATERRSLVELGRL IDYEPRPGVAANAHLAFTVEDAPGAPEHAASPVAIAAGVKVQSIPGPGELPKTFETVEPIVAHPEWNAMRPQLTEPQLIS TDMRAVLLKGTSSSLKPGDRILIVESEDPSQRIALEVVTVKAQPESGTTSVTLAYNPPEPRRWRWPRRPIHVFGPELISL TTLQVNTNVMSYRWRQADLDAFARVQGWSHRALMRNIRWQVAHRIFQPEAGVFSFRERAGIYGHNAPKPGANNTPGLPDG KTLADEAGANMERAIDLDRTYPEIIPGSWLLLKSPTSEHIIEQVEDSLELSRADYGLSGKVTRLLLNSDDSFSGLAVRET TVFAGSQRLDLAELPVVDDVEGNRVTLETVYLGLQVGQNVVVTGERSDLAGVVDHEVMTLAEVEFSDGRTTLVFSQDLSG SYLRDTVTINANVARATHGETVQETLGGGNASLANQAFMLRQPPVTHVSSNSPTGSSSTLQVRVNDLAWQEVPNLFNRAP EDRVYVTQIGDDGSTTVQFGDGINGARPPTGLDNVRATYRKGIGKGGNLDAGKLSLLLTRPAGVRNVVNPLPASGGADPE TADSIRRNAPLTIMTMDRIVSLQDYEDFARAFAGIEKAMAVPWASTGQAPGVFITVAGPDGASVDPGSPIMVNLLAAIRS GSAPHVPLEVRSYRRAYFEVTATIMVQADHETDPVVAAVEAALRVSFSFDARAFGQPVMLSEVMAVMQAVPGVIAVDVDQ LSRIDDHHRRRELLPPAAIAAATAEIRRDGSLLAAELLTLDPRPVHLRGERR >Mature_852_residues MKALSYRAGTYRQFKDTMLGRLGSSAAGLRSRQDTDFSIALLDAFACTADTLTFYQERIANECYLSTATERRSLVELGRL IDYEPRPGVAANAHLAFTVEDAPGAPEHAASPVAIAAGVKVQSIPGPGELPKTFETVEPIVAHPEWNAMRPQLTEPQLIS TDMRAVLLKGTSSSLKPGDRILIVESEDPSQRIALEVVTVKAQPESGTTSVTLAYNPPEPRRWRWPRRPIHVFGPELISL TTLQVNTNVMSYRWRQADLDAFARVQGWSHRALMRNIRWQVAHRIFQPEAGVFSFRERAGIYGHNAPKPGANNTPGLPDG KTLADEAGANMERAIDLDRTYPEIIPGSWLLLKSPTSEHIIEQVEDSLELSRADYGLSGKVTRLLLNSDDSFSGLAVRET TVFAGSQRLDLAELPVVDDVEGNRVTLETVYLGLQVGQNVVVTGERSDLAGVVDHEVMTLAEVEFSDGRTTLVFSQDLSG SYLRDTVTINANVARATHGETVQETLGGGNASLANQAFMLRQPPVTHVSSNSPTGSSSTLQVRVNDLAWQEVPNLFNRAP EDRVYVTQIGDDGSTTVQFGDGINGARPPTGLDNVRATYRKGIGKGGNLDAGKLSLLLTRPAGVRNVVNPLPASGGADPE TADSIRRNAPLTIMTMDRIVSLQDYEDFARAFAGIEKAMAVPWASTGQAPGVFITVAGPDGASVDPGSPIMVNLLAAIRS GSAPHVPLEVRSYRRAYFEVTATIMVQADHETDPVVAAVEAALRVSFSFDARAFGQPVMLSEVMAVMQAVPGVIAVDVDQ LSRIDDHHRRRELLPPAAIAAATAEIRRDGSLLAAELLTLDPRPVHLRGERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92279; Mature: 92279
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALSYRAGTYRQFKDTMLGRLGSSAAGLRSRQDTDFSIALLDAFACTADTLTFYQERIA CCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC NECYLSTATERRSLVELGRLIDYEPRPGVAANAHLAFTVEDAPGAPEHAASPVAIAAGVK CHHEEECHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEECCCCCCCCCCCCEEEEECCE VQSIPGPGELPKTFETVEPIVAHPEWNAMRPQLTEPQLISTDMRAVLLKGTSSSLKPGDR EEECCCCCCCCCHHHHCCCEECCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCE ILIVESEDPSQRIALEVVTVKAQPESGTTSVTLAYNPPEPRRWRWPRRPIHVFGPELISL EEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEE TTLQVNTNVMSYRWRQADLDAFARVQGWSHRALMRNIRWQVAHRIFQPEAGVFSFRERAG EEEEEECCEEEEEECHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC IYGHNAPKPGANNTPGLPDGKTLADEAGANMERAIDLDRTYPEIIPGSWLLLKSPTSEHI CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHEEECCCCCHHHCCCCEEEEECCCHHHH IEQVEDSLELSRADYGLSGKVTRLLLNSDDSFSGLAVRETTVFAGSQRLDLAELPVVDDV HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHCCEEECC EGNRVTLETVYLGLQVGQNVVVTGERSDLAGVVDHEVMTLAEVEFSDGRTTLVFSQDLSG CCCEEEEEEEEEEHCCCCEEEEECCCCCCCHHHHHHEEEEEEEEECCCCEEEEEECCCCC SYLRDTVTINANVARATHGETVQETLGGGNASLANQAFMLRQPPVTHVSSNSPTGSSSTL CEEEEEEEEECCEEECCCCCHHHHHHCCCCCCHHCCEEEEECCCCCEECCCCCCCCCCEE QVRVNDLAWQEVPNLFNRAPEDRVYVTQIGDDGSTTVQFGDGINGARPPTGLDNVRATYR EEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHH KGIGKGGNLDAGKLSLLLTRPAGVRNVVNPLPASGGADPETADSIRRNAPLTIMTMDRIV HCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHH SLQDYEDFARAFAGIEKAMAVPWASTGQAPGVFITVAGPDGASVDPGSPIMVNLLAAIRS CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC GSAPHVPLEVRSYRRAYFEVTATIMVQADHETDPVVAAVEAALRVSFSFDARAFGQPVML CCCCCCCHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHEEEEECCHHHCCCCHHH SEVMAVMQAVPGVIAVDVDQLSRIDDHHRRRELLPPAAIAAATAEIRRDGSLLAAELLTL HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHCC DPRPVHLRGERR CCCCEEECCCCC >Mature Secondary Structure MKALSYRAGTYRQFKDTMLGRLGSSAAGLRSRQDTDFSIALLDAFACTADTLTFYQERIA CCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC NECYLSTATERRSLVELGRLIDYEPRPGVAANAHLAFTVEDAPGAPEHAASPVAIAAGVK CHHEEECHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEECCCCCCCCCCCCEEEEECCE VQSIPGPGELPKTFETVEPIVAHPEWNAMRPQLTEPQLISTDMRAVLLKGTSSSLKPGDR EEECCCCCCCCCHHHHCCCEECCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCE ILIVESEDPSQRIALEVVTVKAQPESGTTSVTLAYNPPEPRRWRWPRRPIHVFGPELISL EEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEEE TTLQVNTNVMSYRWRQADLDAFARVQGWSHRALMRNIRWQVAHRIFQPEAGVFSFRERAG EEEEEECCEEEEEECHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC IYGHNAPKPGANNTPGLPDGKTLADEAGANMERAIDLDRTYPEIIPGSWLLLKSPTSEHI CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHEEECCCCCHHHCCCCEEEEECCCHHHH IEQVEDSLELSRADYGLSGKVTRLLLNSDDSFSGLAVRETTVFAGSQRLDLAELPVVDDV HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHCCEEECC EGNRVTLETVYLGLQVGQNVVVTGERSDLAGVVDHEVMTLAEVEFSDGRTTLVFSQDLSG CCCEEEEEEEEEEHCCCCEEEEECCCCCCCHHHHHHEEEEEEEEECCCCEEEEEECCCCC SYLRDTVTINANVARATHGETVQETLGGGNASLANQAFMLRQPPVTHVSSNSPTGSSSTL CEEEEEEEEECCEEECCCCCHHHHHHCCCCCCHHCCEEEEECCCCCEECCCCCCCCCCEE QVRVNDLAWQEVPNLFNRAPEDRVYVTQIGDDGSTTVQFGDGINGARPPTGLDNVRATYR EEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHH KGIGKGGNLDAGKLSLLLTRPAGVRNVVNPLPASGGADPETADSIRRNAPLTIMTMDRIV HCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHH SLQDYEDFARAFAGIEKAMAVPWASTGQAPGVFITVAGPDGASVDPGSPIMVNLLAAIRS CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC GSAPHVPLEVRSYRRAYFEVTATIMVQADHETDPVVAAVEAALRVSFSFDARAFGQPVML CCCCCCCHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHEEEEECCHHHCCCCHHH SEVMAVMQAVPGVIAVDVDQLSRIDDHHRRRELLPPAAIAAATAEIRRDGSLLAAELLTL HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHCC DPRPVHLRGERR CCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA