| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341296
Identifier: 146341296
GI number: 146341296
Start: 4568560
End: 4571043
Strand: Reverse
Name: 146341296
Synonym: BRADO4377
Alternate gene names: NA
Gene position: 4571043-4568560 (Counterclockwise)
Preceding gene: 146341297
Following gene: 146341295
Centisome position: 61.3
GC content: 66.43
Gene sequence:
>2484_bases ATGAGGCCGTATTTCTGTTGCGATGATGTCAGGCGCAATGCGGTCAGGGCGTCGGCCAATCTCAATGGCATCGATTTTCT GGAGGTCGTCGACAGCGATGCGGCGACGCCGGCCGACCGGCAACGCGTGCTGCGGCTCGCCTTCGTCAAGGCGCCGCCGC CGGGACTGACGCCGGCCAATGTGGTGATCACGGGCGGCGAACGCATCCGCAATGTCGCGGCGGACAAGGTCGGCTATGAG GGCAACGCCGTCGTCATCCACCTCAACGCCTATGGTGATTATTCGCCGTATCGGCTGCAACTGGTCGGCGCCACCGGCAG CAGCTTCGATCCCAAGACGCTGGATCCAATCCTGTCGGGAATCGATTTCGCATTCAAGGTGGAGTGCCCGAGCGAGTTCG ATTGCGGTGCGCCGCCGGACCCGGCCGCGGCGCCCGCGGCGAGGGGTCCTGATATCGACTACCTCACCAAGGACTACACC GGATATCGGCAGCTGATGCTCGATCGCCTGACAGCGCTCAGCCCGCAATGGACGGAGCGCAATCCGGCCGATCTCGGCGT CGCCCTGGTGGAGACCCTGGCCTTCGTCGCAGATCAATTGAGCTATCGACAGGATGCGGTGGCGACCGAGGCCTATCTCG CCACGGCGCGGCGGCGGGTCTCGGTCAGGCGTCACGCCCGGCTCGTCGACTACATCATGCATGACGGGATCAACGCGCGC GCCTTCGTACATATCGGCGTGTCCGCCGATCTGACGGTGCCGAAAGCGACGAAGCTGCTGACCGGGATGAGCGGACAGCC GGTTCGCGCATCGGCCGTTTCGATGGCGGCGCCCGGCGTGCAGCGCGGCGTCGAGACATTCGAGACCATGGCGGACACGA AGCTGTTCGCCGCGCACAACATCCTGCCGTTCTATACTTGGGGCAGCGGCCGATGCGTGCTGCCGACGGGGGCAACCCGC GCCGCCTTGAAGGGACGCTTCCCGAGCCTGCAGCCCGGCATGGTCCTGGTGTTCGAGGAAATCGCCGGGCGGCGCACGGG TCTGGCCCAGGATGCGGATCCGTTGCAGCGCCATCTCGTGCAACTCACCAAGGTCACCGCGACGAGCGATCCGATCGGCG GCGCCTTCGATCAGCCGCCGACGACCCAATCGGTCGATGTCACCGAGATCGAATGGGCATCGGAGGACGCGCTGCCATGC GCGCTCTGGATTAGTGCCCAGGCGGCTCAGCCTGATGGCAGCACGAAGCCGGTCGTAGTCGCAACCGCGCGCGGCAACAT GGTGTTGGCGGATCACGGCGCGACGCTGCCGGGGGCGGAGGACCTCGGCAAGGTCCCGGAATCGCGGCTGAGCTATCTGC CGCAACCCGCAACACCCTGTGATATTGCCGACGCGCGGCCGCTGCCGCCGCGGTTCCGGCCGCGATTGAAGGAGACTGCG CTGATTCATGTCCCGCCCTATGATGCTGCGCGCCCTCCGACATCGGCCCGTGCCGCGTTGAATCCGTCGATCGGCGACGC GATTCCGCAGATCAGCCTGACGAGCAACGACGGTGTCCGACAGGCCGTGTGGAAGCCGCAGCGCGACCTGCTCAACAGCG AGCCGGATGAACGTCATTTCGTCGTCGAGACGGAGACCGACGGAACGGCATGGGTGCGGTTCGGCGACGACACCCATGGC AGCCGCCCGATCGCCGGCACGGCCTTCAGCGCGACCTATCGGGTCGGCAATGCGCTGCGCGGCAATGTTGCGGCGGAGGC GATCTGTCAGGCCGTCATCAGCGATCCCGCGGTGCAGACCGTGCGCAATCCATTGCCGGCGCGTGGCGGCCGCGCGCCGG AGCAGATCGACGATGTCCGCCGCAAGGCTCCGTTTGCGTTCCGGACGCAGGCGCGCGCGGTCACGCCGGCCGATTATGAA GCACTGGCGGCGACCCATCCGAAGGTGCAGCGCGCTGCAGCCGTGCTGCGCTGGACCGGAAGCTGGATGACGGTGCTCCT GACCATCGACCGGCGCGGTGGTGAAGCGGTGGATGACACGTTCGAGTCCGAGATCCGCGCTTTCGTCGAGCCGTATCGTC TGACCGGTCACGACCTCGAAGTGAACGGGCCCGACTTCGTCGCGCTGGAGATCGCAGCGCGCGTCAGCGTCGCGGCCAAT CACTTCCGGTCGGACGTGAAGGCGGACCTGTTGCGGCTGTTCGGCAACGGCGTGCTGCCTGACGGACGGCTTGCCGTGTT TCACCCCGACAATTTCACCTTCGGTCAGCCTGTCTATCTCAGCGCGCTCTATGCGGCCGCGCTCGGGGTCGACGGCGTCG CCGCGATCCAGATCACGACCTTTCAACGTCAAGGCCAGCCGAGCAGCGCGGCGCTGATGCGAGGACGGCTCGATCTCGGA CGCTTCGAGATCGCGCGGCTGGACAACAATCCCGACTATCCCGAGCGCGGCGTGTTTCGTCTGACGATGGAGGGCGGCAA ATGA
Upstream 100 bases:
>100_bases CGGTCGAGAGCCAGGACGCCGCGCTCCGGGTGACCGTGCAATACCTCGTACGCCGCACGCAGCAGCGGCAGAGCGTCCAG TTCTCCAAGGACATCCAGCC
Downstream 100 bases:
>100_bases GCAGCACATCGCGAGACGCTCACCCTCCGGAGTGTCCCTGCTGCGGCGAAAGCGCTGCAGCCCGAACGCCGGTCGAGATC TTCAATCGGCCCGGCTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MRPYFCCDDVRRNAVRASANLNGIDFLEVVDSDAATPADRQRVLRLAFVKAPPPGLTPANVVITGGERIRNVAADKVGYE GNAVVIHLNAYGDYSPYRLQLVGATGSSFDPKTLDPILSGIDFAFKVECPSEFDCGAPPDPAAAPAARGPDIDYLTKDYT GYRQLMLDRLTALSPQWTERNPADLGVALVETLAFVADQLSYRQDAVATEAYLATARRRVSVRRHARLVDYIMHDGINAR AFVHIGVSADLTVPKATKLLTGMSGQPVRASAVSMAAPGVQRGVETFETMADTKLFAAHNILPFYTWGSGRCVLPTGATR AALKGRFPSLQPGMVLVFEEIAGRRTGLAQDADPLQRHLVQLTKVTATSDPIGGAFDQPPTTQSVDVTEIEWASEDALPC ALWISAQAAQPDGSTKPVVVATARGNMVLADHGATLPGAEDLGKVPESRLSYLPQPATPCDIADARPLPPRFRPRLKETA LIHVPPYDAARPPTSARAALNPSIGDAIPQISLTSNDGVRQAVWKPQRDLLNSEPDERHFVVETETDGTAWVRFGDDTHG SRPIAGTAFSATYRVGNALRGNVAAEAICQAVISDPAVQTVRNPLPARGGRAPEQIDDVRRKAPFAFRTQARAVTPADYE ALAATHPKVQRAAAVLRWTGSWMTVLLTIDRRGGEAVDDTFESEIRAFVEPYRLTGHDLEVNGPDFVALEIAARVSVAAN HFRSDVKADLLRLFGNGVLPDGRLAVFHPDNFTFGQPVYLSALYAAALGVDGVAAIQITTFQRQGQPSSAALMRGRLDLG RFEIARLDNNPDYPERGVFRLTMEGGK
Sequences:
>Translated_827_residues MRPYFCCDDVRRNAVRASANLNGIDFLEVVDSDAATPADRQRVLRLAFVKAPPPGLTPANVVITGGERIRNVAADKVGYE GNAVVIHLNAYGDYSPYRLQLVGATGSSFDPKTLDPILSGIDFAFKVECPSEFDCGAPPDPAAAPAARGPDIDYLTKDYT GYRQLMLDRLTALSPQWTERNPADLGVALVETLAFVADQLSYRQDAVATEAYLATARRRVSVRRHARLVDYIMHDGINAR AFVHIGVSADLTVPKATKLLTGMSGQPVRASAVSMAAPGVQRGVETFETMADTKLFAAHNILPFYTWGSGRCVLPTGATR AALKGRFPSLQPGMVLVFEEIAGRRTGLAQDADPLQRHLVQLTKVTATSDPIGGAFDQPPTTQSVDVTEIEWASEDALPC ALWISAQAAQPDGSTKPVVVATARGNMVLADHGATLPGAEDLGKVPESRLSYLPQPATPCDIADARPLPPRFRPRLKETA LIHVPPYDAARPPTSARAALNPSIGDAIPQISLTSNDGVRQAVWKPQRDLLNSEPDERHFVVETETDGTAWVRFGDDTHG SRPIAGTAFSATYRVGNALRGNVAAEAICQAVISDPAVQTVRNPLPARGGRAPEQIDDVRRKAPFAFRTQARAVTPADYE ALAATHPKVQRAAAVLRWTGSWMTVLLTIDRRGGEAVDDTFESEIRAFVEPYRLTGHDLEVNGPDFVALEIAARVSVAAN HFRSDVKADLLRLFGNGVLPDGRLAVFHPDNFTFGQPVYLSALYAAALGVDGVAAIQITTFQRQGQPSSAALMRGRLDLG RFEIARLDNNPDYPERGVFRLTMEGGK >Mature_827_residues MRPYFCCDDVRRNAVRASANLNGIDFLEVVDSDAATPADRQRVLRLAFVKAPPPGLTPANVVITGGERIRNVAADKVGYE GNAVVIHLNAYGDYSPYRLQLVGATGSSFDPKTLDPILSGIDFAFKVECPSEFDCGAPPDPAAAPAARGPDIDYLTKDYT GYRQLMLDRLTALSPQWTERNPADLGVALVETLAFVADQLSYRQDAVATEAYLATARRRVSVRRHARLVDYIMHDGINAR AFVHIGVSADLTVPKATKLLTGMSGQPVRASAVSMAAPGVQRGVETFETMADTKLFAAHNILPFYTWGSGRCVLPTGATR AALKGRFPSLQPGMVLVFEEIAGRRTGLAQDADPLQRHLVQLTKVTATSDPIGGAFDQPPTTQSVDVTEIEWASEDALPC ALWISAQAAQPDGSTKPVVVATARGNMVLADHGATLPGAEDLGKVPESRLSYLPQPATPCDIADARPLPPRFRPRLKETA LIHVPPYDAARPPTSARAALNPSIGDAIPQISLTSNDGVRQAVWKPQRDLLNSEPDERHFVVETETDGTAWVRFGDDTHG SRPIAGTAFSATYRVGNALRGNVAAEAICQAVISDPAVQTVRNPLPARGGRAPEQIDDVRRKAPFAFRTQARAVTPADYE ALAATHPKVQRAAAVLRWTGSWMTVLLTIDRRGGEAVDDTFESEIRAFVEPYRLTGHDLEVNGPDFVALEIAARVSVAAN HFRSDVKADLLRLFGNGVLPDGRLAVFHPDNFTFGQPVYLSALYAAALGVDGVAAIQITTFQRQGQPSSAALMRGRLDLG RFEIARLDNNPDYPERGVFRLTMEGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89241; Mature: 89241
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPYFCCDDVRRNAVRASANLNGIDFLEVVDSDAATPADRQRVLRLAFVKAPPPGLTPAN CCCCCCHHHHHHHHEECCCCCCCCCHHEECCCCCCCCHHHHHHHHHEEEECCCCCCCCCC VVITGGERIRNVAADKVGYEGNAVVIHLNAYGDYSPYRLQLVGATGSSFDPKTLDPILSG EEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCC IDFAFKVECPSEFDCGAPPDPAAAPAARGPDIDYLTKDYTGYRQLMLDRLTALSPQWTER CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCC NPADLGVALVETLAFVADQLSYRQDAVATEAYLATARRRVSVRRHARLVDYIMHDGINAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE AFVHIGVSADLTVPKATKLLTGMSGQPVRASAVSMAAPGVQRGVETFETMADTKLFAAHN EEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC ILPFYTWGSGRCVLPTGATRAALKGRFPSLQPGMVLVFEEIAGRRTGLAQDADPLQRHLV CEEEEEECCCEEECCCCCCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCCHHHHHHHH QLTKVTATSDPIGGAFDQPPTTQSVDVTEIEWASEDALPCALWISAQAAQPDGSTKPVVV HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEE ATARGNMVLADHGATLPGAEDLGKVPESRLSYLPQPATPCDIADARPLPPRFRPRLKETA EECCCCEEEEECCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCE LIHVPPYDAARPPTSARAALNPSIGDAIPQISLTSNDGVRQAVWKPQRDLLNSEPDERHF EEEECCCCCCCCCCCCHHCCCCCHHHHCCEEEECCCCCHHHHHCCCHHHHHCCCCCCCEE VVETETDGTAWVRFGDDTHGSRPIAGTAFSATYRVGNALRGNVAAEAICQAVISDPAVQT EEEECCCCEEEEEECCCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH VRNPLPARGGRAPEQIDDVRRKAPFAFRTQARAVTPADYEALAATHPKVQRAAAVLRWTG HHCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCC SWMTVLLTIDRRGGEAVDDTFESEIRAFVEPYRLTGHDLEVNGPDFVALEIAARVSVAAN CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHHHHH HFRSDVKADLLRLFGNGVLPDGRLAVFHPDNFTFGQPVYLSALYAAALGVDGVAAIQITT HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEE FQRQGQPSSAALMRGRLDLGRFEIARLDNNPDYPERGVFRLTMEGGK ECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MRPYFCCDDVRRNAVRASANLNGIDFLEVVDSDAATPADRQRVLRLAFVKAPPPGLTPAN CCCCCCHHHHHHHHEECCCCCCCCCHHEECCCCCCCCHHHHHHHHHEEEECCCCCCCCCC VVITGGERIRNVAADKVGYEGNAVVIHLNAYGDYSPYRLQLVGATGSSFDPKTLDPILSG EEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCC IDFAFKVECPSEFDCGAPPDPAAAPAARGPDIDYLTKDYTGYRQLMLDRLTALSPQWTER CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCC NPADLGVALVETLAFVADQLSYRQDAVATEAYLATARRRVSVRRHARLVDYIMHDGINAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE AFVHIGVSADLTVPKATKLLTGMSGQPVRASAVSMAAPGVQRGVETFETMADTKLFAAHN EEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC ILPFYTWGSGRCVLPTGATRAALKGRFPSLQPGMVLVFEEIAGRRTGLAQDADPLQRHLV CEEEEEECCCEEECCCCCCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCCHHHHHHHH QLTKVTATSDPIGGAFDQPPTTQSVDVTEIEWASEDALPCALWISAQAAQPDGSTKPVVV HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEE ATARGNMVLADHGATLPGAEDLGKVPESRLSYLPQPATPCDIADARPLPPRFRPRLKETA EECCCCEEEEECCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCE LIHVPPYDAARPPTSARAALNPSIGDAIPQISLTSNDGVRQAVWKPQRDLLNSEPDERHF EEEECCCCCCCCCCCCHHCCCCCHHHHCCEEEECCCCCHHHHHCCCHHHHHCCCCCCCEE VVETETDGTAWVRFGDDTHGSRPIAGTAFSATYRVGNALRGNVAAEAICQAVISDPAVQT EEEECCCCEEEEEECCCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH VRNPLPARGGRAPEQIDDVRRKAPFAFRTQARAVTPADYEALAATHPKVQRAAAVLRWTG HHCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCC SWMTVLLTIDRRGGEAVDDTFESEIRAFVEPYRLTGHDLEVNGPDFVALEIAARVSVAAN CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHHHHH HFRSDVKADLLRLFGNGVLPDGRLAVFHPDNFTFGQPVYLSALYAAALGVDGVAAIQITT HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEE FQRQGQPSSAALMRGRLDLGRFEIARLDNNPDYPERGVFRLTMEGGK ECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA