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The map label for this gene is hdeD [C]

Identifier: 146340548

GI number: 146340548

Start: 3783168

End: 3783755

Strand: Reverse

Name: hdeD [C]

Synonym: BRADO3591

Alternate gene names: 146340548

Gene position: 3783755-3783168 (Counterclockwise)

Preceding gene: 146340549

Following gene: 146340547

Centisome position: 50.74

GC content: 66.84

Gene sequence:

>588_bases
ATGACGCTACCGCAGGATACGATTCCGCCCGAGCTCGAGCGCGTGAGGTCGAGGATGGGCGCGGCCGTGCGCGCGCATTG
GAAAGCCTTCCTCGTCGAGGGCATCCTGCTGGCGGTGCTCGGCCTGCTCGCCGTGGTTCTCACCCCGCTGGCGAGCCTTG
CGGTCACGATCTTCCTCGGCTGGATGTTCTTGATCTCGGGCATCGCCGGCCTCGCGCTGACCTTCTGGGCCCGCGGCATG
CCCGGCTTCTGGTGGTCGCTGCTCTCGGCGGTGCTCGCCATCCTCGCCGGATTGATCCTGGTGGCCCAGCCGATCCAGGG
CACGCTCACCCTCACCGTCGTGATCGGCGTCTATTTCCTCGCCGAGGGCGTCGCCACCATCATGTACGCGCTCGAGCACC
GGCGCGAATTGTCCGGCCGCTGGTCCTGGCTCGCGATCTCAGGACTCGTCGATATCGCCATAGCCGGCATCATCATTTCC
GGTCTGCCCGGCACCGCAACCTGGGCGATCGGCCTTCTGGTCGGCATCAATCTGCTGTTCGGCGGCCTGTCGATGATCGG
CATGGCGCTCGCGGCGCGAAACGCCTGA

Upstream 100 bases:

>100_bases
TGAAACGCGGCTCGGGCGCTTGTCCGGACCGTGGTTCCACACCATCTGCGTGAGCAGCAGGCGCCGCGTCCAGCGCGCGA
CCGTGCCGGAGTGACGATCG

Downstream 100 bases:

>100_bases
GGCAGCTGAGTTTCCATTTTTGGGATGACAATCCGCGCCGCGACCGCTATAGGACCTCCATGATCAACGCCGCCACCAGC
TATTATTGGTACTTTAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTLPQDTIPPELERVRSRMGAAVRAHWKAFLVEGILLAVLGLLAVVLTPLASLAVTIFLGWMFLISGIAGLALTFWARGM
PGFWWSLLSAVLAILAGLILVAQPIQGTLTLTVVIGVYFLAEGVATIMYALEHRRELSGRWSWLAISGLVDIAIAGIIIS
GLPGTATWAIGLLVGINLLFGGLSMIGMALAARNA

Sequences:

>Translated_195_residues
MTLPQDTIPPELERVRSRMGAAVRAHWKAFLVEGILLAVLGLLAVVLTPLASLAVTIFLGWMFLISGIAGLALTFWARGM
PGFWWSLLSAVLAILAGLILVAQPIQGTLTLTVVIGVYFLAEGVATIMYALEHRRELSGRWSWLAISGLVDIAIAGIIIS
GLPGTATWAIGLLVGINLLFGGLSMIGMALAARNA
>Mature_194_residues
TLPQDTIPPELERVRSRMGAAVRAHWKAFLVEGILLAVLGLLAVVLTPLASLAVTIFLGWMFLISGIAGLALTFWARGMP
GFWWSLLSAVLAILAGLILVAQPIQGTLTLTVVIGVYFLAEGVATIMYALEHRRELSGRWSWLAISGLVDIAIAGIIISG
LPGTATWAIGLLVGINLLFGGLSMIGMALAARNA

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20643; Mature: 20512

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPQDTIPPELERVRSRMGAAVRAHWKAFLVEGILLAVLGLLAVVLTPLASLAVTIFLG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMFLISGIAGLALTFWARGMPGFWWSLLSAVLAILAGLILVAQPIQGTLTLTVVIGVYFL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AEGVATIMYALEHRRELSGRWSWLAISGLVDIAIAGIIISGLPGTATWAIGLLVGINLLF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GGLSMIGMALAARNA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLPQDTIPPELERVRSRMGAAVRAHWKAFLVEGILLAVLGLLAVVLTPLASLAVTIFLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMFLISGIAGLALTFWARGMPGFWWSLLSAVLAILAGLILVAQPIQGTLTLTVVIGVYFL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AEGVATIMYALEHRRELSGRWSWLAISGLVDIAIAGIIISGLPGTATWAIGLLVGINLLF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GGLSMIGMALAARNA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA