| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340467
Identifier: 146340467
GI number: 146340467
Start: 3690053
End: 3690838
Strand: Reverse
Name: 146340467
Synonym: BRADO3507
Alternate gene names: NA
Gene position: 3690838-3690053 (Counterclockwise)
Preceding gene: 146340468
Following gene: 146340465
Centisome position: 49.5
GC content: 64.5
Gene sequence:
>786_bases TTGACCCAGAGGACCTTCTTCATGCCGTCATTCCGCAAGCTCCTTCCCGCGGCGCTGCTCGCGCTTTCGCTCAGCGGCGT CCCGCAGGTCGCGACGGCACAGAGCATCTCCGACAGCCAGCGGGGCGAGATCGAGACCATCGTGCGGAACTATCTGATCG CCCATCCCGAGGTGCTCGAGGAAGCGATGACAGAGTTGCAGAAGCGGCAGACCGCCGCCGAAGCGGCGAAGCACGAGGCA AGCATCACCAAGAACGCCGACACCATCTTCAACTCGCCGCGCGGCGTCGTGCTCGGCAACAAGGATGGCGACGTCACCTT CGTCGAGTTCTTCGATTACAATTGCGGCTACTGCAAGCGCGCGATGGCCGACATGATGGAGCTGATGAAGAGCGATCCGA AGCTGAAGGTCGTGCTGAAGGAATTCCCCGTGCTGAGCCAGGGCTCGGTCGAAGCCGCCCAGGTCGCCGTCGCTGTCCGG ATGCAGGCGCCGCAGAAATATCTCGACTTCCATCAGAAGCTGCTCGGTGGCCGCGGCCAGGCCGACAAGGCCCACGCGCT CGCGGTCGCCAAGGACCTCGGCCTCGACATGGCCAAGATCGAGAAGGACATGGCGAGCCCCGAGGCCAAGGCGACGATCG AGGAGAACTTCAAGCTCGCCGAGGACATGGGCATGAACGGCACGCCGAGCTACGTCATCGGCAAGCAGGTCGTGGTCGGC GCCGTCGGCGTCGAGGGCCTGCGCGAGAAGATCAGCACCGCGCGCTGCGGCAAGGCGACCTGCTGA
Upstream 100 bases:
>100_bases GTCCAAACCGCTTTCGAACCAGTAGAACGACCAATTTGCTGCTAACATCAAGCTCGGATTACCAAAATACCAATCCAGCT CTGACAAGGACCCGATCATT
Downstream 100 bases:
>100_bases GCGCCTGCGGATCGCGCCGCAAACCACGAAGGCCGGCTGCATCAGCCGGCCTTTTTGTTTGCTCGGCGGACGGACCTTGC CGCTTATCCGTCACGCGGTC
Product: putative outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; DSBA-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein DsbA; Protein-Disulfide Isomerase; DsbA Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Oxidoreductase; 27kDa Outer Membrane Protein; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; Disulfide Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity C; Suppressor For Copper-Sensitivity C; DSBA Thioredoxin Domain-Containing Protein; Metal Resistance Protein; Disulfide Bond Formation Protein D; DsbA-Like Disulfide Oxidoreductase; Dsba Oxidoreductase Family Protein; Secreted Protein Suppressor For Copper-Sensitivity ScsC; ThiolDisulfide Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; Dsba-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein; Disulfide Bonded Thioredoxin Protein; Thiol-Disulfide Isomerase; Copper-Sensitivity Suppressor C Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTQRTFFMPSFRKLLPAALLALSLSGVPQVATAQSISDSQRGEIETIVRNYLIAHPEVLEEAMTELQKRQTAAEAAKHEA SITKNADTIFNSPRGVVLGNKDGDVTFVEFFDYNCGYCKRAMADMMELMKSDPKLKVVLKEFPVLSQGSVEAAQVAVAVR MQAPQKYLDFHQKLLGGRGQADKAHALAVAKDLGLDMAKIEKDMASPEAKATIEENFKLAEDMGMNGTPSYVIGKQVVVG AVGVEGLREKISTARCGKATC
Sequences:
>Translated_261_residues MTQRTFFMPSFRKLLPAALLALSLSGVPQVATAQSISDSQRGEIETIVRNYLIAHPEVLEEAMTELQKRQTAAEAAKHEA SITKNADTIFNSPRGVVLGNKDGDVTFVEFFDYNCGYCKRAMADMMELMKSDPKLKVVLKEFPVLSQGSVEAAQVAVAVR MQAPQKYLDFHQKLLGGRGQADKAHALAVAKDLGLDMAKIEKDMASPEAKATIEENFKLAEDMGMNGTPSYVIGKQVVVG AVGVEGLREKISTARCGKATC >Mature_260_residues TQRTFFMPSFRKLLPAALLALSLSGVPQVATAQSISDSQRGEIETIVRNYLIAHPEVLEEAMTELQKRQTAAEAAKHEAS ITKNADTIFNSPRGVVLGNKDGDVTFVEFFDYNCGYCKRAMADMMELMKSDPKLKVVLKEFPVLSQGSVEAAQVAVAVRM QAPQKYLDFHQKLLGGRGQADKAHALAVAKDLGLDMAKIEKDMASPEAKATIEENFKLAEDMGMNGTPSYVIGKQVVVGA VGVEGLREKISTARCGKATC
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28344; Mature: 28213
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRTFFMPSFRKLLPAALLALSLSGVPQVATAQSISDSQRGEIETIVRNYLIAHPEVLE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH EAMTELQKRQTAAEAAKHEASITKNADTIFNSPRGVVLGNKDGDVTFVEFFDYNCGYCKR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEEEEEECCCCCHHHH AMADMMELMKSDPKLKVVLKEFPVLSQGSVEAAQVAVAVRMQAPQKYLDFHQKLLGGRGQ HHHHHHHHHHCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC ADKAHALAVAKDLGLDMAKIEKDMASPEAKATIEENFKLAEDMGMNGTPSYVIGKQVVVG CCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AVGVEGLREKISTARCGKATC HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQRTFFMPSFRKLLPAALLALSLSGVPQVATAQSISDSQRGEIETIVRNYLIAHPEVLE CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH EAMTELQKRQTAAEAAKHEASITKNADTIFNSPRGVVLGNKDGDVTFVEFFDYNCGYCKR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEEEEEECCCCCHHHH AMADMMELMKSDPKLKVVLKEFPVLSQGSVEAAQVAVAVRMQAPQKYLDFHQKLLGGRGQ HHHHHHHHHHCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC ADKAHALAVAKDLGLDMAKIEKDMASPEAKATIEENFKLAEDMGMNGTPSYVIGKQVVVG CCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AVGVEGLREKISTARCGKATC HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA