| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340441
Identifier: 146340441
GI number: 146340441
Start: 3663354
End: 3664049
Strand: Reverse
Name: 146340441
Synonym: BRADO3481
Alternate gene names: NA
Gene position: 3664049-3663354 (Counterclockwise)
Preceding gene: 146340448
Following gene: 146340439
Centisome position: 49.14
GC content: 69.11
Gene sequence:
>696_bases ATGGCCGCCCCACTCTCCATCGCTCTCGTGCTGTTTCCTCACGTGACCCAGCTCGACCTCACCGGCCCCGTGCAGGTGTT CTCCAGCGTCCCTGGTGCGACGCTGCACCTGGTGTGGAAGCGCATCGAGCCCATTCCGACGGATTCCGTTCTGACGCTGC TGCCGACGACGACCTTCGCGGAGTGCCCGCAAGCGGACGTCATCTGCATCCCCGGCGGCTTCGGCATCGACGCCATTCTC GACGATCCCGAAGTTATCGGCTTCATCCGCCGCCAGGCCGAGGGCGCCAAATACATCACCTCCGTCTGCACCGGCTCGCT CGCGCTCGGTGCCGCCGGCCTGCTCGAAGGCTATCGCGCCGCGACCCATTGGAGCGCCCGCGAATGTCTGCCGCTGTTCG GCGCGACCATCAGCACCGAGCGCGTCTGCGTCGATCGCAACCGCATCACCGGCGGCGGCGTGACCGCGGGGATCGATTTC GCGCTGACGCTGGTGGCGCAGCTGGTCGATCGTCCGACCGCCGAATCCATTCAGCTCCGGCTCGAATACAACCCGGCGCC GCCGTTCACCGCCGGCTCGCCCGATACGGCGCCGCCCGAGGTGCTGTCGCGGATGCTGGAGCGGATCGCACCGTTTCGGC AGCGGCGCGTCGCGGCGGCCGAACGCGCGGCCGCCAGTATCGGCCGCAGCGCCTAG
Upstream 100 bases:
>100_bases AGCGGTCTGTCTGAAATCGAGGGAACTTTGACATTTGAGACAGGCAGCGGATCATGCAGGATCGTTGGCGTCAACCCGTC ATTGCCCGTGAGATCCGCCC
Downstream 100 bases:
>100_bases TCCGGCCGCGGGCGCAATCGCCCATCGCAAGAAGGCCGCCCGGAGCCCGGACGGCCTCTCAAACCTCATTCAGAACCGCG GGCGAATCAGCTGCCGGGCG
Product: putative DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; Isonitrile Hydratase; ThiJ Family Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA-Family Transcriptional Regulator; ADPA Family Transcriptional Regulator; AraC Family Regulatory Protein; Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAAPLSIALVLFPHVTQLDLTGPVQVFSSVPGATLHLVWKRIEPIPTDSVLTLLPTTTFAECPQADVICIPGGFGIDAIL DDPEVIGFIRRQAEGAKYITSVCTGSLALGAAGLLEGYRAATHWSARECLPLFGATISTERVCVDRNRITGGGVTAGIDF ALTLVAQLVDRPTAESIQLRLEYNPAPPFTAGSPDTAPPEVLSRMLERIAPFRQRRVAAAERAAASIGRSA
Sequences:
>Translated_231_residues MAAPLSIALVLFPHVTQLDLTGPVQVFSSVPGATLHLVWKRIEPIPTDSVLTLLPTTTFAECPQADVICIPGGFGIDAIL DDPEVIGFIRRQAEGAKYITSVCTGSLALGAAGLLEGYRAATHWSARECLPLFGATISTERVCVDRNRITGGGVTAGIDF ALTLVAQLVDRPTAESIQLRLEYNPAPPFTAGSPDTAPPEVLSRMLERIAPFRQRRVAAAERAAASIGRSA >Mature_230_residues AAPLSIALVLFPHVTQLDLTGPVQVFSSVPGATLHLVWKRIEPIPTDSVLTLLPTTTFAECPQADVICIPGGFGIDAILD DPEVIGFIRRQAEGAKYITSVCTGSLALGAAGLLEGYRAATHWSARECLPLFGATISTERVCVDRNRITGGGVTAGIDFA LTLVAQLVDRPTAESIQLRLEYNPAPPFTAGSPDTAPPEVLSRMLERIAPFRQRRVAAAERAAASIGRSA
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24471; Mature: 24340
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPLSIALVLFPHVTQLDLTGPVQVFSSVPGATLHLVWKRIEPIPTDSVLTLLPTTTFA CCCCHHHHHHHHCCCEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHH ECPQADVICIPGGFGIDAILDDPEVIGFIRRQAEGAKYITSVCTGSLALGAAGLLEGYRA HCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ATHWSARECLPLFGATISTERVCVDRNRITGGGVTAGIDFALTLVAQLVDRPTAESIQLR HHCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE LEYNPAPPFTAGSPDTAPPEVLSRMLERIAPFRQRRVAAAERAAASIGRSA EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAPLSIALVLFPHVTQLDLTGPVQVFSSVPGATLHLVWKRIEPIPTDSVLTLLPTTTFA CCCHHHHHHHHCCCEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHH ECPQADVICIPGGFGIDAILDDPEVIGFIRRQAEGAKYITSVCTGSLALGAAGLLEGYRA HCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ATHWSARECLPLFGATISTERVCVDRNRITGGGVTAGIDFALTLVAQLVDRPTAESIQLR HHCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE LEYNPAPPFTAGSPDTAPPEVLSRMLERIAPFRQRRVAAAERAAASIGRSA EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA