| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hisJ [C]
Identifier: 146340448
GI number: 146340448
Start: 3670806
End: 3671639
Strand: Reverse
Name: hisJ [C]
Synonym: BRADO3488
Alternate gene names: 146340448
Gene position: 3671639-3670806 (Counterclockwise)
Preceding gene: 146340449
Following gene: 146340441
Centisome position: 49.24
GC content: 65.95
Gene sequence:
>834_bases TTGCGCTATGCGCTGGCGATCGGCTCAGGCGCCGCGCTCGCGTCCGCGATGACGACGACGCCGGCCTCGGCGCAGGCGGC CGCCGACAACACGCTCGACCGGGTTCGCGCCAGCAAGGTGCTGCGCATCGCCGTGCTGCCGGGCGAGCTTCCCTATTTCA ACAAGGACCTCGCCTCCGGCACCTGGTCGGGCTTCTCGATCGAGATGGCCAACGACATCGCCAAGCTGCTCGACGTGAAG CTCGAATATGTCGAATCGACCTACGGCAATTCGGTGCTCGACCTGCAGGCCGGCAAGATCGATCTCGGCTTCGCGCTCAA CCCGACGCCGCAGCGCGCGCTGGTGATCGACTTCTGCGGCACGGTGTTCCCGCATCCGTTCGGCGCGATGCTGAAGAAGG GCATGGAAGCCAAGACCTGGGCCGACATCAACAAGCCGGAGGTGAAGATCGCCGTCGACGTCGGCTCGGCCAACGAGGCG GTGGCGCGGCGCTTCGCGCCGAACGCGACCATCAAGTCGCTGAAGTCGCGCGACGAGGTGATGCTGGAGATGGCCTCGGG CCGCGTCGACGTCGTCGTCAACGCCCTGATCCTCGGCCTCACCGCGATCGCCAAGAACCCCAATCTCGGAAGCTACAAGA TCCTGCAGTCGCCGTCGGTCGCGATCCCCTCCAGCATGGGTGTCCGCCGCGAGGCCGACAAGCGCTGGCGCGACTTCCTC GCGGTGTGGATCGACTACAACCGCGGCATCGGCCAGATGCGCGAATGGTTCGTCAAGGGCCTGGGGCTTGCCGGCGTCAA GGCCGAGGATGTGCCGGTCGAAGTGAATATCTAA
Upstream 100 bases:
>100_bases TGGCGTGCGACGCCGACGCTACGCTCCGCGCCGATTGGTGCAGGAGGATGTTGTGACCACGTCAGACGATCAGACCATTT CCGAAGACCGCCGCGAGGCC
Downstream 100 bases:
>100_bases GGCGGCCCCGCTCTCTCCACCGTCATTGCGAGGCGCGTAGCGACGAAGCAATCCAGAGCTCAGGTTGCAGCCCTGGATTG CTTCGCTTCGCTCGCAATGA
Product: putative signal peptide
Products: ADP; phosphate; L-histidine [Cytoplasm] [C]
Alternate protein names: Carboxycyclohexadienyl Dehydratase; Amino Acid ABC Transporter; Prephrenate Dehydratase; Signal Peptide; Cyclohexadienyl Dehydratase Periplasmic; Soluble Lytic Transglycosylase; Cyclohexadienyl Dehydratase Signal Peptide Protein
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MRYALAIGSGAALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDIAKLLDVK LEYVESTYGNSVLDLQAGKIDLGFALNPTPQRALVIDFCGTVFPHPFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEA VARRFAPNATIKSLKSRDEVMLEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADKRWRDFL AVWIDYNRGIGQMREWFVKGLGLAGVKAEDVPVEVNI
Sequences:
>Translated_277_residues MRYALAIGSGAALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDIAKLLDVK LEYVESTYGNSVLDLQAGKIDLGFALNPTPQRALVIDFCGTVFPHPFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEA VARRFAPNATIKSLKSRDEVMLEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADKRWRDFL AVWIDYNRGIGQMREWFVKGLGLAGVKAEDVPVEVNI >Mature_277_residues MRYALAIGSGAALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASGTWSGFSIEMANDIAKLLDVK LEYVESTYGNSVLDLQAGKIDLGFALNPTPQRALVIDFCGTVFPHPFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEA VARRFAPNATIKSLKSRDEVMLEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADKRWRDFL AVWIDYNRGIGQMREWFVKGLGLAGVKAEDVPVEVNI
Specific function: Component Of The High-Affinity Histidine Permease, A Binding-Protein-Dependent Transport System. The Other Components Are Proteins Hisq, Hism, And Hisp. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29841; Mature: 29841
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYALAIGSGAALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASG CEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHCCC TWSGFSIEMANDIAKLLDVKLEYVESTYGNSVLDLQAGKIDLGFALNPTPQRALVIDFCG CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCEEEEEHHH TVFPHPFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEV HHCCCCHHHHHHCCCCCCHHCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHH MLEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADKRWRDFL HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHE AVWIDYNRGIGQMREWFVKGLGLAGVKAEDVPVEVNI EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MRYALAIGSGAALASAMTTTPASAQAAADNTLDRVRASKVLRIAVLPGELPYFNKDLASG CEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHCCC TWSGFSIEMANDIAKLLDVKLEYVESTYGNSVLDLQAGKIDLGFALNPTPQRALVIDFCG CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCEEEEEHHH TVFPHPFGAMLKKGMEAKTWADINKPEVKIAVDVGSANEAVARRFAPNATIKSLKSRDEV HHCCCCHHHHHHCCCCCCHHCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHH MLEMASGRVDVVVNALILGLTAIAKNPNLGSYKILQSPSVAIPSSMGVRREADKRWRDFL HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHE AVWIDYNRGIGQMREWFVKGLGLAGVKAEDVPVEVNI EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA