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The map label for this gene is atoS [C]

Identifier: 146340438

GI number: 146340438

Start: 3659182

End: 3661467

Strand: Reverse

Name: atoS [C]

Synonym: BRADO3478

Alternate gene names: 146340438

Gene position: 3661467-3659182 (Counterclockwise)

Preceding gene: 146340439

Following gene: 146340437

Centisome position: 49.1

GC content: 66.14

Gene sequence:

>2286_bases
ATGATTCGTCAGCGCCTTGCCCTGGGGCTCGGTCTTGGAACGCTGCTTGCGATCGGCGCGGCGTCCGCGGCGCTTGACGT
CAAGTCGCGCCACGACGAGGCCTGGGTGACCTCGTCGCTCGACATCCTGCAGAAGACCTCCGATCTGCGTCTACTGCTGA
GCGAGGCGGAAGCCAGCTCACGCGGCTTCGCGCTGACGGGCGCAGCCCCTTTCCGCACCGAGTTCGACAATGTCAGCACG
AAGATTCCCTCCGCCGTCGCTGATCTGCAGCGCGCGGTTGCCGACAGTCCGATGCCGACCAAGCTTCTCGGTGACACCGC
GGCACTGATCGTTCGCAGGATCGACATCGCCGCGGAGCTGATCAGGCTGCGCGCAGCGTCCGACACCGCCGGGCTCCAGG
CGCTCGGCAGCCGCGGCGAAGGCCCGGCGACCATGCACACGATCACGGAGAATCTCGACCGCTTCGTCACCGATCAGCGC
GCCCTGCTGGCGCAACGCTCGATCACCTCGAAGACCACGGGATCGCTGCTGCTCACGATCGACCTGTGCGGGCTCGCGCT
GCTTCTAGTGATCGCAGCCTATCTGATCCGGCACGCTTATCTGGAGGACCGGGCGCTCCGCAGCTCGCTGGTCCGCTCCG
AAGCGGAGGCCGTCTCGCTCGCCGAGCGCGCCGAGAAGCAGCATCTCGATCTCGTCGAGGCCCATGAGAAGCTGCGCCAC
TCCGCGGAGATCCTGCAGAGCACGTTCAACAGCATGGCCGAAGGCGTGCTCGTGATCGACGCCGCCGATACGGTCGTGTT
CTCGAACCCCGCGGTCGAGCGCCTGCTCGGCTATCGTCCCGGCCGGAATCTGTCCGATGTACGCTCTCACCTGCGTGTCT
ATGAGAGTGACGGCCTCACGCCGGTCGCGGCACACGATCTGCCGACACCCCGCGCGCTCCGCGGCGAGTCGTTCGACCGC
CGTGAGCTGATCATCCATCAGCCCGACCACGATGAGACGCTGCGCCTGATGATCAGCGGCCGTCCGCTGCGCGACAGCGC
AGGACGCATCACGGGCGCGGCGATGGTCTATCACGACATCACGGCCGCCCATGAGACCGAGCGGCTGCTCCAGCAGGCGC
AAAAGCTCGACGCCATCGGCAAGCTCACCGGCGGCGTCGCGCACGACTTCAACAACATGCTGACGATCATCACCGGCACG
ATCGAGACGCTGGCCGACGAGGTGAGAGACCGTCCGGCCGCGGCGGCCACCGCCGCGCTGATCGGCCAGGCCGCAGACCG
CTGCACCGAGCTGATCCGGCATCTGCTGGCTTTCGCCCGCAAGCAGCCGCTGCATCCGCGCGACAGCGACGTCAACAGCA
CGATCCTGGACATCGCCAAGCTGCTGCGGCCGACCCTCGGCGAGCAGATCGAGATCAATTCGATCCTGGAAGAGGAGACG
CTGATCGCCCACATCGACTCAGCGCAGCTTGCCAACTCGCTGGTCAACATGGCCATCAACGCCCGCGACGCGATGCCCAA
TGGCGGCAAGCTGCTGCTGGAATCCCGCCGGGTGGAACTCGACGATGCCTATGCCGCAGCCAATGCCGGCGTGACGCCGG
GCTCCTACATCATGGTGGCCGTCAGCGACACCGGCACGGGCATGTCGCCCGCCGTGCGCGATCGCGCGTTCGAGCCGTTC
TTCACCACCAAGGAAGCGGGCAAAGGCTCCGGCCTCGGCCTGAGCATGGTCTACGGCTTCGTCAAGCAGTCGGGCGGTCA
CATCAAGATCTACAGCGAGGAAGGCCGGGGCACCACCATCCGCCTGTACATTCCGGCGCCCAAGGGGCAGACCGCAACGC
CTGCCCTGCCCGATCCACCGCCCCCGCGCGGAGATGAGACCATCTTCATCGTCGAGGACGACCTGCTGGTGCAGGACTTC
GTCGTCGCCCAGCTGCAAAGCCTGGGCTACAAGACGATGACCGCTTCCACCGGTGTCGAGGCGCTGGCCAAGATCGAATC
CGGGCAGCCCTTCGATCTGTTGTTCACCGACGTCATCATGCCAGGTGGCGTCAATGGCAAGGAACTTGCCGAGGAGACGC
TGCGGCAGCGGCCAGGCACAAAGGTCCTGTACACCTCGGGCTACACCGATAATGCGATGGTGGAACACGGCCGCATCGAT
CACGCCTCGCTCCTGCTCACCAAGCCCTATCGCAAGTCAGAGCTCGCCCAGATGGTGCGTCTCGCCTTGCACAGTTCGGA
TGCCCCCCGCGAAGTCGCCTCGCCGGGCCGCGTCCTGGCCAACTGA

Upstream 100 bases:

>100_bases
AGTTCCTTCGACGCAGCTGCACCGGTCGCCGGATGCGTGGGGCTGGTCGCAGTGATCGACCGGTCAGCCGGCGACACCTT
TGGATGATTGAGACACGCGG

Downstream 100 bases:

>100_bases
GTTCGTTCGCCGCCTGCTCAACGTCCTGGAACCCCGAACGGGTTACGTGTGCAATCCCCATGGAACCTGAGCCGGATGAT
TGGCAGTCCGGCACGACACA

Product: sensor histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MIRQRLALGLGLGTLLAIGAASAALDVKSRHDEAWVTSSLDILQKTSDLRLLLSEAEASSRGFALTGAAPFRTEFDNVST
KIPSAVADLQRAVADSPMPTKLLGDTAALIVRRIDIAAELIRLRAASDTAGLQALGSRGEGPATMHTITENLDRFVTDQR
ALLAQRSITSKTTGSLLLTIDLCGLALLLVIAAYLIRHAYLEDRALRSSLVRSEAEAVSLAERAEKQHLDLVEAHEKLRH
SAEILQSTFNSMAEGVLVIDAADTVVFSNPAVERLLGYRPGRNLSDVRSHLRVYESDGLTPVAAHDLPTPRALRGESFDR
RELIIHQPDHDETLRLMISGRPLRDSAGRITGAAMVYHDITAAHETERLLQQAQKLDAIGKLTGGVAHDFNNMLTIITGT
IETLADEVRDRPAAAATAALIGQAADRCTELIRHLLAFARKQPLHPRDSDVNSTILDIAKLLRPTLGEQIEINSILEEET
LIAHIDSAQLANSLVNMAINARDAMPNGGKLLLESRRVELDDAYAAANAGVTPGSYIMVAVSDTGTGMSPAVRDRAFEPF
FTTKEAGKGSGLGLSMVYGFVKQSGGHIKIYSEEGRGTTIRLYIPAPKGQTATPALPDPPPPRGDETIFIVEDDLLVQDF
VVAQLQSLGYKTMTASTGVEALAKIESGQPFDLLFTDVIMPGGVNGKELAEETLRQRPGTKVLYTSGYTDNAMVEHGRID
HASLLLTKPYRKSELAQMVRLALHSSDAPREVASPGRVLAN

Sequences:

>Translated_761_residues
MIRQRLALGLGLGTLLAIGAASAALDVKSRHDEAWVTSSLDILQKTSDLRLLLSEAEASSRGFALTGAAPFRTEFDNVST
KIPSAVADLQRAVADSPMPTKLLGDTAALIVRRIDIAAELIRLRAASDTAGLQALGSRGEGPATMHTITENLDRFVTDQR
ALLAQRSITSKTTGSLLLTIDLCGLALLLVIAAYLIRHAYLEDRALRSSLVRSEAEAVSLAERAEKQHLDLVEAHEKLRH
SAEILQSTFNSMAEGVLVIDAADTVVFSNPAVERLLGYRPGRNLSDVRSHLRVYESDGLTPVAAHDLPTPRALRGESFDR
RELIIHQPDHDETLRLMISGRPLRDSAGRITGAAMVYHDITAAHETERLLQQAQKLDAIGKLTGGVAHDFNNMLTIITGT
IETLADEVRDRPAAAATAALIGQAADRCTELIRHLLAFARKQPLHPRDSDVNSTILDIAKLLRPTLGEQIEINSILEEET
LIAHIDSAQLANSLVNMAINARDAMPNGGKLLLESRRVELDDAYAAANAGVTPGSYIMVAVSDTGTGMSPAVRDRAFEPF
FTTKEAGKGSGLGLSMVYGFVKQSGGHIKIYSEEGRGTTIRLYIPAPKGQTATPALPDPPPPRGDETIFIVEDDLLVQDF
VVAQLQSLGYKTMTASTGVEALAKIESGQPFDLLFTDVIMPGGVNGKELAEETLRQRPGTKVLYTSGYTDNAMVEHGRID
HASLLLTKPYRKSELAQMVRLALHSSDAPREVASPGRVLAN
>Mature_761_residues
MIRQRLALGLGLGTLLAIGAASAALDVKSRHDEAWVTSSLDILQKTSDLRLLLSEAEASSRGFALTGAAPFRTEFDNVST
KIPSAVADLQRAVADSPMPTKLLGDTAALIVRRIDIAAELIRLRAASDTAGLQALGSRGEGPATMHTITENLDRFVTDQR
ALLAQRSITSKTTGSLLLTIDLCGLALLLVIAAYLIRHAYLEDRALRSSLVRSEAEAVSLAERAEKQHLDLVEAHEKLRH
SAEILQSTFNSMAEGVLVIDAADTVVFSNPAVERLLGYRPGRNLSDVRSHLRVYESDGLTPVAAHDLPTPRALRGESFDR
RELIIHQPDHDETLRLMISGRPLRDSAGRITGAAMVYHDITAAHETERLLQQAQKLDAIGKLTGGVAHDFNNMLTIITGT
IETLADEVRDRPAAAATAALIGQAADRCTELIRHLLAFARKQPLHPRDSDVNSTILDIAKLLRPTLGEQIEINSILEEET
LIAHIDSAQLANSLVNMAINARDAMPNGGKLLLESRRVELDDAYAAANAGVTPGSYIMVAVSDTGTGMSPAVRDRAFEPF
FTTKEAGKGSGLGLSMVYGFVKQSGGHIKIYSEEGRGTTIRLYIPAPKGQTATPALPDPPPPRGDETIFIVEDDLLVQDF
VVAQLQSLGYKTMTASTGVEALAKIESGQPFDLLFTDVIMPGGVNGKELAEETLRQRPGTKVLYTSGYTDNAMVEHGRID
HASLLLTKPYRKSELAQMVRLALHSSDAPREVASPGRVLAN

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=382, Percent_Identity=27.7486910994764, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=27.4261603375527, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI87081816, Length=211, Percent_Identity=24.1706161137441, Blast_Score=70, Evalue=7e-13,
Organism=Escherichia coli, GI1790300, Length=376, Percent_Identity=25.7978723404255, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI48994928, Length=224, Percent_Identity=26.7857142857143, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788713, Length=277, Percent_Identity=29.9638989169675, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 82068; Mature: 82068

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQRLALGLGLGTLLAIGAASAALDVKSRHDEAWVTSSLDILQKTSDLRLLLSEAEASS
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
RGFALTGAAPFRTEFDNVSTKIPSAVADLQRAVADSPMPTKLLGDTAALIVRRIDIAAEL
CCEEEECCCCCCCCCCCHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IRLRAASDTAGLQALGSRGEGPATMHTITENLDRFVTDQRALLAQRSITSKTTGSLLLTI
HHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH
DLCGLALLLVIAAYLIRHAYLEDRALRSSLVRSEAEAVSLAERAEKQHLDLVEAHEKLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEILQSTFNSMAEGVLVIDAADTVVFSNPAVERLLGYRPGRNLSDVRSHLRVYESDGLT
HHHHHHHHHHHHHCCEEEEEECCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PVAAHDLPTPRALRGESFDRRELIIHQPDHDETLRLMISGRPLRDSAGRITGAAMVYHDI
EEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
TAAHETERLLQQAQKLDAIGKLTGGVAHDFNNMLTIITGTIETLADEVRDRPAAAATAAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHH
IGQAADRCTELIRHLLAFARKQPLHPRDSDVNSTILDIAKLLRPTLGEQIEINSILEEET
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHH
LIAHIDSAQLANSLVNMAINARDAMPNGGKLLLESRRVELDDAYAAANAGVTPGSYIMVA
HHEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEEE
VSDTGTGMSPAVRDRAFEPFFTTKEAGKGSGLGLSMVYGFVKQSGGHIKIYSEEGRGTTI
EECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE
RLYIPAPKGQTATPALPDPPPPRGDETIFIVEDDLLVQDFVVAQLQSLGYKTMTASTGVE
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHHH
ALAKIESGQPFDLLFTDVIMPGGVNGKELAEETLRQRPGTKVLYTSGYTDNAMVEHGRID
HHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCC
HASLLLTKPYRKSELAQMVRLALHSSDAPREVASPGRVLAN
CCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MIRQRLALGLGLGTLLAIGAASAALDVKSRHDEAWVTSSLDILQKTSDLRLLLSEAEASS
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
RGFALTGAAPFRTEFDNVSTKIPSAVADLQRAVADSPMPTKLLGDTAALIVRRIDIAAEL
CCEEEECCCCCCCCCCCHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IRLRAASDTAGLQALGSRGEGPATMHTITENLDRFVTDQRALLAQRSITSKTTGSLLLTI
HHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH
DLCGLALLLVIAAYLIRHAYLEDRALRSSLVRSEAEAVSLAERAEKQHLDLVEAHEKLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEILQSTFNSMAEGVLVIDAADTVVFSNPAVERLLGYRPGRNLSDVRSHLRVYESDGLT
HHHHHHHHHHHHHCCEEEEEECCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PVAAHDLPTPRALRGESFDRRELIIHQPDHDETLRLMISGRPLRDSAGRITGAAMVYHDI
EEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
TAAHETERLLQQAQKLDAIGKLTGGVAHDFNNMLTIITGTIETLADEVRDRPAAAATAAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHH
IGQAADRCTELIRHLLAFARKQPLHPRDSDVNSTILDIAKLLRPTLGEQIEINSILEEET
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHH
LIAHIDSAQLANSLVNMAINARDAMPNGGKLLLESRRVELDDAYAAANAGVTPGSYIMVA
HHEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEEE
VSDTGTGMSPAVRDRAFEPFFTTKEAGKGSGLGLSMVYGFVKQSGGHIKIYSEEGRGTTI
EECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE
RLYIPAPKGQTATPALPDPPPPRGDETIFIVEDDLLVQDFVVAQLQSLGYKTMTASTGVE
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHHH
ALAKIESGQPFDLLFTDVIMPGGVNGKELAEETLRQRPGTKVLYTSGYTDNAMVEHGRID
HHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCC
HASLLLTKPYRKSELAQMVRLALHSSDAPREVASPGRVLAN
CCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA