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The map label for this gene is yiaN [C]

Identifier: 146340208

GI number: 146340208

Start: 3426510

End: 3427814

Strand: Reverse

Name: yiaN [C]

Synonym: BRADO3226

Alternate gene names: 146340208

Gene position: 3427814-3426510 (Counterclockwise)

Preceding gene: 146340209

Following gene: 146340206

Centisome position: 45.97

GC content: 66.13

Gene sequence:

>1305_bases
ATGACCATCGAAGTCATCGCCCTTTTCGTCATCCTATTCGCGCTGCTGGCCGGCGGCCTGTGGATCGGGCTCACGCTCGC
CTTCACCGCGACCCTGCTGCTGGCGATGTTCCGCTCGATCCCGCTGGACAAGCTGCTGCCGCAATATGCCTGGAACATCC
TGACCACCCAGGAGCTGCTGGCGCTGCCGCTGTTCATCCTGATGGGCGAGCTGCTGTTCCGCACCCGCCTGTCGCGCTCG
CTGTTCCAGGGACTCGCGCCCTGGGCCGGCCTGCTGCCGGGCCGGCTGCTCCACGTCAACGTCATCGGCTGCACCATCTT
CGCCGCGATCTCCGGCTCGTCGGCCGCGACCACGCAGGTGATCGGCCGGATGTCGCTCAACGAGCTCCTGCGCCGCGGCT
ATTCGCGCGACATCGCGATCGGCTCGCTGGCCGGCGCCGGCACGCTGGGCTTCCTGATCCCGCCGTCGAACATCATGATC
ATCTATGGCGTGCTCGGCGACGTTTCTATTCTGAAGCTCTTCACCGCCGGCGTGCTGCCCGGCCTGCTGCTCGCCGGCAC
CTTCATGGGCTGGGTGATGCTGCACACCACGCTGAAGCCCGCGATGGTGCCGAAGGCCGAGGCACAGCTGTCGCAGGTGC
CGTGGGCCGAGCGCTTCGCCGCGCTCAAGGACCTCGCGCCAGCCCTGTTCCTGATCGCCTGCGTGCTCGGCTCGATGTAT
GGCGGCCTCGCCACGCCCTCGGAAGCCGCCGCGGTCGGCGTGCTCGGCGCGGCGCTGGTCGCCTTTTTCCAGGGAGCCCT
ATCTCAGCAGGTCGTCCGCGACGTGATGATCGGCTCGGTGATCACCTGCTCGATGATCGCGCTGATCGTGCTCGGCGCCT
CGATCCTCGGCAATGCCGCGGCGTTCCTCGGAATCCCCCAGGCGGTCGCCGCCTTCGTCAAGGGGCTCGGCCTGTCGCCG
TTCATGCTCATCGTGGTGCTGATCGTGTTCTATCTGATCCTGGGCTGCTTCCTGGACGGCTTCTCGATGATCGTGATGAC
CCTGCCGATCGTGCTGCCGATCGTGAAGGGCGCCGGCTTCGACGAGGTCTGGTTCGGGATCTTCCTGGTGCTCGCGGTTG
AGATGGCCCAGATCACGCCGCCGGTCGGCTTCAATCTGTTTGTGATCCAGGGCCTGACGGAGGACGGCCTCGGCTATATC
GCCCGCGTGACCGCCCCCTATCTGATCATCATGATCGCCTTCGTGCTGCTGCTCACCCTGCTCCCGGGCATCGTGACGAT
CCTGCCAAAACTGCTCTACGGGTGA

Upstream 100 bases:

>100_bases
ACGTGGATGGCCGGGACAAGCCCTGCCATGACGACGTGGAGACAGACGAACGCAAAACTTCGAACGCAGTCGCCCTCCTC
ACCGCGGACTCCCCCACCCC

Downstream 100 bases:

>100_bases
TCCATGTGACGTCAGCGACCTTTTTCCCCACCGTCATTCCGGGGCATTCGCGCGCAAGACGGCAAAGCCGTCTTGAAGCA
GCGCGAATGAGCCCGGATTC

Product: putative TRAP-type C4-dicarboxylate transport system, large permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTIEVIALFVILFALLAGGLWIGLTLAFTATLLLAMFRSIPLDKLLPQYAWNILTTQELLALPLFILMGELLFRTRLSRS
LFQGLAPWAGLLPGRLLHVNVIGCTIFAAISGSSAATTQVIGRMSLNELLRRGYSRDIAIGSLAGAGTLGFLIPPSNIMI
IYGVLGDVSILKLFTAGVLPGLLLAGTFMGWVMLHTTLKPAMVPKAEAQLSQVPWAERFAALKDLAPALFLIACVLGSMY
GGLATPSEAAAVGVLGAALVAFFQGALSQQVVRDVMIGSVITCSMIALIVLGASILGNAAAFLGIPQAVAAFVKGLGLSP
FMLIVVLIVFYLILGCFLDGFSMIVMTLPIVLPIVKGAGFDEVWFGIFLVLAVEMAQITPPVGFNLFVIQGLTEDGLGYI
ARVTAPYLIIMIAFVLLLTLLPGIVTILPKLLYG

Sequences:

>Translated_434_residues
MTIEVIALFVILFALLAGGLWIGLTLAFTATLLLAMFRSIPLDKLLPQYAWNILTTQELLALPLFILMGELLFRTRLSRS
LFQGLAPWAGLLPGRLLHVNVIGCTIFAAISGSSAATTQVIGRMSLNELLRRGYSRDIAIGSLAGAGTLGFLIPPSNIMI
IYGVLGDVSILKLFTAGVLPGLLLAGTFMGWVMLHTTLKPAMVPKAEAQLSQVPWAERFAALKDLAPALFLIACVLGSMY
GGLATPSEAAAVGVLGAALVAFFQGALSQQVVRDVMIGSVITCSMIALIVLGASILGNAAAFLGIPQAVAAFVKGLGLSP
FMLIVVLIVFYLILGCFLDGFSMIVMTLPIVLPIVKGAGFDEVWFGIFLVLAVEMAQITPPVGFNLFVIQGLTEDGLGYI
ARVTAPYLIIMIAFVLLLTLLPGIVTILPKLLYG
>Mature_433_residues
TIEVIALFVILFALLAGGLWIGLTLAFTATLLLAMFRSIPLDKLLPQYAWNILTTQELLALPLFILMGELLFRTRLSRSL
FQGLAPWAGLLPGRLLHVNVIGCTIFAAISGSSAATTQVIGRMSLNELLRRGYSRDIAIGSLAGAGTLGFLIPPSNIMII
YGVLGDVSILKLFTAGVLPGLLLAGTFMGWVMLHTTLKPAMVPKAEAQLSQVPWAERFAALKDLAPALFLIACVLGSMYG
GLATPSEAAAVGVLGAALVAFFQGALSQQVVRDVMIGSVITCSMIALIVLGASILGNAAAFLGIPQAVAAFVKGLGLSPF
MLIVVLIVFYLILGCFLDGFSMIVMTLPIVLPIVKGAGFDEVWFGIFLVLAVEMAQITPPVGFNLFVIQGLTEDGLGYIA
RVTAPYLIIMIAFVLLLTLLPGIVTILPKLLYG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=389, Percent_Identity=30.8483290488432, Blast_Score=123, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45951; Mature: 45819

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEVIALFVILFALLAGGLWIGLTLAFTATLLLAMFRSIPLDKLLPQYAWNILTTQELL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALPLFILMGELLFRTRLSRSLFQGLAPWAGLLPGRLLHVNVIGCTIFAAISGSSAATTQV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHH
IGRMSLNELLRRGYSRDIAIGSLAGAGTLGFLIPPSNIMIIYGVLGDVSILKLFTAGVLP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH
GLLLAGTFMGWVMLHTTLKPAMVPKAEAQLSQVPWAERFAALKDLAPALFLIACVLGSMY
HHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLATPSEAAAVGVLGAALVAFFQGALSQQVVRDVMIGSVITCSMIALIVLGASILGNAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGIPQAVAAFVKGLGLSPFMLIVVLIVFYLILGCFLDGFSMIVMTLPIVLPIVKGAGF
HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DEVWFGIFLVLAVEMAQITPPVGFNLFVIQGLTEDGLGYIARVTAPYLIIMIAFVLLLTL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPGIVTILPKLLYG
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TIEVIALFVILFALLAGGLWIGLTLAFTATLLLAMFRSIPLDKLLPQYAWNILTTQELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALPLFILMGELLFRTRLSRSLFQGLAPWAGLLPGRLLHVNVIGCTIFAAISGSSAATTQV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHH
IGRMSLNELLRRGYSRDIAIGSLAGAGTLGFLIPPSNIMIIYGVLGDVSILKLFTAGVLP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH
GLLLAGTFMGWVMLHTTLKPAMVPKAEAQLSQVPWAERFAALKDLAPALFLIACVLGSMY
HHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLATPSEAAAVGVLGAALVAFFQGALSQQVVRDVMIGSVITCSMIALIVLGASILGNAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGIPQAVAAFVKGLGLSPFMLIVVLIVFYLILGCFLDGFSMIVMTLPIVLPIVKGAGF
HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DEVWFGIFLVLAVEMAQITPPVGFNLFVIQGLTEDGLGYIARVTAPYLIIMIAFVLLLTL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPGIVTILPKLLYG
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]