| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is glsA1 [H]
Identifier: 146340115
GI number: 146340115
Start: 3325604
End: 3327466
Strand: Reverse
Name: glsA1 [H]
Synonym: BRADO3130
Alternate gene names: 146340115
Gene position: 3327466-3325604 (Counterclockwise)
Preceding gene: 146340118
Following gene: 146340114
Centisome position: 44.62
GC content: 67.85
Gene sequence:
>1863_bases ATGACCACCGACACTCCGCGCCCACATCGCAATCCGCAGCACTGGGCCTCCGCCGCAATGCCTCCGCTGCAGCGCTTCCT CTCGGCCTGCCACGCCGACTTCTGGCCCGATCATGACGGCGCGGTCGCGAACTACATTCCCGAGCTGGGCAAGGCGGACC CCGCGCATTTCGGCATCAGCCTCGCCACGCTCGACGGCCATGTCTACGAGGTCGGCGACAGCCGCGTGCCGTTCACGATC CAGTCGATGTCGAAGCCGTTCGTCTTCGCGCTCGCGCTCGACATTCTCGGCTCCGACGCCGTCGAGCGCGTGATCGGCGT CGAGCCTTCCGGCGATCCCTTCAATTCGATCCGGCTCAATGCCGACAATCATCCGTTCAATGCGATGGTCAATGCCGGCG CGATCGCCTGCAGCGGCCTCGTGCGCGGGGCCCGGCACGCCGACGCGTTCGAGACCATCCGCGACGCGCTTGGCCGCTTC GCCGGCCGCAAGCTCGATGTCGACGACGCCGTATTCGCCTCGGAAGCGGCGACCGGCGACCGCAACCGCGCCATCGCCTA TCTGCTGCGGACGTCCGGGGTCATCAGCGAGCCGGTCGACGACGTGCTCGCGGTGTACTTCCGGCAATGCGCCGTGCTCG TCACGGCGCGCGATTGCGCCATCATGGCGGCGACGCTCGCCAATCGCGGCGTCAATCCAGTGACCGGCGAGCAGGTCGTG ACGCCCTATGCGGTGTCCCGCACGCTCTCGGTCATGACCTCGTCGGGCATGTATGACTTTGCGGGCGAATGGATCTATCG CGTCGGCATTCCGGCCAAGAGCGGCGTCGGCGGCGGCATACTGGCGAGCCTGCCGGCGCGGCTCGGGCTCGGCAGCTACT CGCCGCGGCTTGATGGCCATGGCAACAGCGCGCGCGGCATCAAGGTCTGCGAGGCGCTGTCGGCGCATTACGGCCTGCAC ATGCTGAATCGCTCGGACGACGCGCGGACCACGATCATCGCCGATTACGACATCGGCGCCAGTCCGTCGCGGCGCAGCCG CCGCACCCAGGAGCGCGAGATCCTCGCCGCGCACCCCGACGCCGTGCGCGTGCTAGAGTTGGTCGGTACGCTGTCGCTCT CGAATGTCGACTACGTCTCGCGCCAGCTGGCCGCGGGCGAGCGCCCGCAATTCGTGATCTTCGATCTGCACCGCGTCACC GCGATGACGCCAGCCGGCCTGCGTCTGCTGGCCGAGCTGTTTCACGAGCTCGCAGATTTCCACGTCACCGTCGTGCTCTC CGGCCTCCGCCGGACCTCGCCGGAATGGCAGGAGATCACGGCGCGCACCGGCGACATCCGCAACGTGCGCGACTTCTATC TGCTCGACACTGCGATCGAATGGGCCGAGGACCAGATCGTCTATCGCTACGGCGGCGCGATCGACTTCCTCGAAACCACC GAGCTTGCCGAGCAGCCGCTGCTGGCCGGCCTCTCCGCCGACGAGCGCCACGAACTGGCCGCGCTGGCCACGATCCGGCA CTATCAGCAGAGCGAGCGCATCCTGTCCGCGGGAGAGGCAGCGAGCTCGCTGTTCTTCCTGCGCTCCGGCGTGGTCCATG TCACCCTGCCCGACGGCATCCGGCTGGCCACGCTGACGGCGGGGCAATGCTTCGGCGAAATGGCCTTGCTCGAGTCGGCA AGATCTGCCGACGTGACGGCCGACTTCTCGGCGACAGCGTTCGAGATCGCGCTGGATGATTTCGAGCGTTTCCGGGCGCG GCATCCGCGCGCCGGCGAGCGGATCATGCGCAACCTCGCGCAGCTGCTGGCGGAGCGCCTGACGATCGCCAATGCGCGGC TGAATCTGCTGGCTGCTGATTGA
Upstream 100 bases:
>100_bases AGCAGCGGCAACAATTGACCAGCCCTGCACCAAGTGTGGGCTGGCTGCTCCGACGGGGCTGCGACATAACCGGCGCCATC CGTGCCGCATCGAGTCCCCC
Downstream 100 bases:
>100_bases GATTGTCATCACAACGTCATATATCGTCGAATCATTTTAAAATCTAAGGTTGTGTTCGCGGCAGCTAATAGCCTTCGGTC GTTATACTCATCACTCGTAT
Product: putative glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MTTDTPRPHRNPQHWASAAMPPLQRFLSACHADFWPDHDGAVANYIPELGKADPAHFGISLATLDGHVYEVGDSRVPFTI QSMSKPFVFALALDILGSDAVERVIGVEPSGDPFNSIRLNADNHPFNAMVNAGAIACSGLVRGARHADAFETIRDALGRF AGRKLDVDDAVFASEAATGDRNRAIAYLLRTSGVISEPVDDVLAVYFRQCAVLVTARDCAIMAATLANRGVNPVTGEQVV TPYAVSRTLSVMTSSGMYDFAGEWIYRVGIPAKSGVGGGILASLPARLGLGSYSPRLDGHGNSARGIKVCEALSAHYGLH MLNRSDDARTTIIADYDIGASPSRRSRRTQEREILAAHPDAVRVLELVGTLSLSNVDYVSRQLAAGERPQFVIFDLHRVT AMTPAGLRLLAELFHELADFHVTVVLSGLRRTSPEWQEITARTGDIRNVRDFYLLDTAIEWAEDQIVYRYGGAIDFLETT ELAEQPLLAGLSADERHELAALATIRHYQQSERILSAGEAASSLFFLRSGVVHVTLPDGIRLATLTAGQCFGEMALLESA RSADVTADFSATAFEIALDDFERFRARHPRAGERIMRNLAQLLAERLTIANARLNLLAAD
Sequences:
>Translated_620_residues MTTDTPRPHRNPQHWASAAMPPLQRFLSACHADFWPDHDGAVANYIPELGKADPAHFGISLATLDGHVYEVGDSRVPFTI QSMSKPFVFALALDILGSDAVERVIGVEPSGDPFNSIRLNADNHPFNAMVNAGAIACSGLVRGARHADAFETIRDALGRF AGRKLDVDDAVFASEAATGDRNRAIAYLLRTSGVISEPVDDVLAVYFRQCAVLVTARDCAIMAATLANRGVNPVTGEQVV TPYAVSRTLSVMTSSGMYDFAGEWIYRVGIPAKSGVGGGILASLPARLGLGSYSPRLDGHGNSARGIKVCEALSAHYGLH MLNRSDDARTTIIADYDIGASPSRRSRRTQEREILAAHPDAVRVLELVGTLSLSNVDYVSRQLAAGERPQFVIFDLHRVT AMTPAGLRLLAELFHELADFHVTVVLSGLRRTSPEWQEITARTGDIRNVRDFYLLDTAIEWAEDQIVYRYGGAIDFLETT ELAEQPLLAGLSADERHELAALATIRHYQQSERILSAGEAASSLFFLRSGVVHVTLPDGIRLATLTAGQCFGEMALLESA RSADVTADFSATAFEIALDDFERFRARHPRAGERIMRNLAQLLAERLTIANARLNLLAAD >Mature_619_residues TTDTPRPHRNPQHWASAAMPPLQRFLSACHADFWPDHDGAVANYIPELGKADPAHFGISLATLDGHVYEVGDSRVPFTIQ SMSKPFVFALALDILGSDAVERVIGVEPSGDPFNSIRLNADNHPFNAMVNAGAIACSGLVRGARHADAFETIRDALGRFA GRKLDVDDAVFASEAATGDRNRAIAYLLRTSGVISEPVDDVLAVYFRQCAVLVTARDCAIMAATLANRGVNPVTGEQVVT PYAVSRTLSVMTSSGMYDFAGEWIYRVGIPAKSGVGGGILASLPARLGLGSYSPRLDGHGNSARGIKVCEALSAHYGLHM LNRSDDARTTIIADYDIGASPSRRSRRTQEREILAAHPDAVRVLELVGTLSLSNVDYVSRQLAAGERPQFVIFDLHRVTA MTPAGLRLLAELFHELADFHVTVVLSGLRRTSPEWQEITARTGDIRNVRDFYLLDTAIEWAEDQIVYRYGGAIDFLETTE LAEQPLLAGLSADERHELAALATIRHYQQSERILSAGEAASSLFFLRSGVVHVTLPDGIRLATLTAGQCFGEMALLESAR SADVTADFSATAFEIALDDFERFRARHPRAGERIMRNLAQLLAERLTIANARLNLLAAD
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=285, Percent_Identity=44.9122807017544, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI20336214, Length=285, Percent_Identity=43.5087719298246, Blast_Score=247, Evalue=2e-65, Organism=Escherichia coli, GI1786693, Length=303, Percent_Identity=37.6237623762376, Blast_Score=199, Evalue=5e-52, Organism=Escherichia coli, GI1787804, Length=282, Percent_Identity=36.8794326241135, Blast_Score=179, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17507019, Length=332, Percent_Identity=38.5542168674699, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17532727, Length=287, Percent_Identity=40.7665505226481, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI193204073, Length=303, Percent_Identity=36.963696369637, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI193204075, Length=305, Percent_Identity=36.0655737704918, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI281363239, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24653158, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI24653156, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI281363241, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=7e-58, Organism=Drosophila melanogaster, GI24653166, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=7e-58, Organism=Drosophila melanogaster, GI24653164, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=8e-58, Organism=Drosophila melanogaster, GI24653162, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=8e-58, Organism=Drosophila melanogaster, GI116008307, Length=289, Percent_Identity=37.0242214532872, Blast_Score=222, Evalue=8e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR018490 - InterPro: IPR000595 - InterPro: IPR015868 - InterPro: IPR014710 - InterPro: IPR002645 [H]
Pfam domain/function: PF00027 cNMP_binding; PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 67359; Mature: 67228
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50042 CNMP_BINDING_3 ; PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTPRPHRNPQHWASAAMPPLQRFLSACHADFWPDHDGAVANYIPELGKADPAHFGIS CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHCEE LATLDGHVYEVGDSRVPFTIQSMSKPFVFALALDILGSDAVERVIGVEPSGDPFNSIRLN EEEECCEEEECCCCCCCEEHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEC ADNHPFNAMVNAGAIACSGLVRGARHADAFETIRDALGRFAGRKLDVDDAVFASEAATGD CCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC RNRAIAYLLRTSGVISEPVDDVLAVYFRQCAVLVTARDCAIMAATLANRGVNPVTGEQVV CCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCCCCCCCEE TPYAVSRTLSVMTSSGMYDFAGEWIYRVGIPAKSGVGGGILASLPARLGLGSYSPRLDGH CHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GNSARGIKVCEALSAHYGLHMLNRSDDARTTIIADYDIGASPSRRSRRTQEREILAAHPD CCCCCHHHHHHHHHHHHCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCH AVRVLELVGTLSLSNVDYVSRQLAAGERPQFVIFDLHRVTAMTPAGLRLLAELFHELADF HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHH HVTVVLSGLRRTSPEWQEITARTGDIRNVRDFYLLDTAIEWAEDQIVYRYGGAIDFLETT HHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEECHHHHH ELAEQPLLAGLSADERHELAALATIRHYQQSERILSAGEAASSLFFLRSGVVHVTLPDGI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEECCCCE RLATLTAGQCFGEMALLESARSADVTADFSATAFEIALDDFERFRARHPRAGERIMRNLA EEEEEEHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QLLAERLTIANARLNLLAAD HHHHHHHHHHCCEEEEEECC >Mature Secondary Structure TTDTPRPHRNPQHWASAAMPPLQRFLSACHADFWPDHDGAVANYIPELGKADPAHFGIS CCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHCEE LATLDGHVYEVGDSRVPFTIQSMSKPFVFALALDILGSDAVERVIGVEPSGDPFNSIRLN EEEECCEEEECCCCCCCEEHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEC ADNHPFNAMVNAGAIACSGLVRGARHADAFETIRDALGRFAGRKLDVDDAVFASEAATGD CCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC RNRAIAYLLRTSGVISEPVDDVLAVYFRQCAVLVTARDCAIMAATLANRGVNPVTGEQVV CCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCCCCCCCEE TPYAVSRTLSVMTSSGMYDFAGEWIYRVGIPAKSGVGGGILASLPARLGLGSYSPRLDGH CHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GNSARGIKVCEALSAHYGLHMLNRSDDARTTIIADYDIGASPSRRSRRTQEREILAAHPD CCCCCHHHHHHHHHHHHCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCH AVRVLELVGTLSLSNVDYVSRQLAAGERPQFVIFDLHRVTAMTPAGLRLLAELFHELADF HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHH HVTVVLSGLRRTSPEWQEITARTGDIRNVRDFYLLDTAIEWAEDQIVYRYGGAIDFLETT HHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEECHHHHH ELAEQPLLAGLSADERHELAALATIRHYQQSERILSAGEAASSLFFLRSGVVHVTLPDGI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEECCCCE RLATLTAGQCFGEMALLESARSADVTADFSATAFEIALDDFERFRARHPRAGERIMRNLA EEEEEEHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QLLAERLTIANARLNLLAAD HHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]