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The map label for this gene is ybfB [H]

Identifier: 146340118

GI number: 146340118

Start: 3330320

End: 3331603

Strand: Reverse

Name: ybfB [H]

Synonym: BRADO3133

Alternate gene names: 146340118

Gene position: 3331603-3330320 (Counterclockwise)

Preceding gene: 146340119

Following gene: 146340115

Centisome position: 44.68

GC content: 68.22

Gene sequence:

>1284_bases
ATGATCTCGAACCAACTCGCAGCCACCCTGGCTCGGCGCAACATCCACTACGGCTGGGTCATGGTCGCCGTGACCTTCTT
CGCGGCTCTCGTGTCCGCCGGGACGGTGGGCGCGCCCGGGGTGTTCATCGTGCCGTTGCAACAGGAATTCGGCTGGAGCA
CAGCCGAGATCTCCTCGGCGCTGTCGATCCGCTTCGTGCTGTTCGGGCTGATGGCGCCGTTCGCGGCGGCCCTGCTCAAC
CGATACGGCCTGCGCAACATAACGCTGCTGGCGCAGCTGATCGTGGTGTCGGCGCTGCTGGCGTCGCTGGCGATGACGCA
GGTCTGGCATCTCGTGCTGCTGTGGGGCGTCGTGATCGGAATCGGCACCGGCATGACCGCGCTGGTACTGGGCGCGACCA
TCGCCACGCGCTGGTTCGTGGCACGGCGCGGCCTCGTGGTCGGCATTCTCACCGCCAGCGTGGCCACCGGACAGCTGGTG
TTCCTGCCGCTGCTCGCGAGTCTGACCGAGCGGCTCGGCTGGCGTACGGCGCTCGCGCTCGTCTGCGTCACGCTCGGCGT
CTCCGCCACCGCCGTGCTGCTCTTGATGCGCGACCGCCCAAGCGATCTCGGCCTGCGCCCGTTCGGAGACACGGGGACCG
AGCCCATCGCAGCGCCCCCGCCCGTCACTACCCCGATCCTCGCCGCCGCGCTCGGCACCTTACGAGATGCGGTACGGGTG
CCAGTGTTCTGGATGCTGTTCGCGACCTTCTTCATCTGCGGCGCGTCGACCAACGGCCTCGTCCAGGTGCATCTGATCCC
GATGTGCCTCGATTTCGGTATCCCGCAGGTCCAGGCCGCGAGCCTGCTCGCCGCGATGGGCATGTTCGACTTCGTCGGCA
CCATCGTGTCGGGCTGGCTGTCGGACCGGTACGACAATCGCTGGCTGCTGTTCTGGTACTACGGACTGCGCGGTCTCTCT
CTCCTCTTCCTTCCGTTCACCGACTTCTCGTTCTACGGCCTGTCGCTGTTCGCGATGTTCTACGGCCTCGACTGGATCGC
GACCGTGCCGCCGACGGTGCGGCTGACGGCGCAGCGCTTCGGGCCGGAGCGCGCCAACCTGGTGTTCGGCTGGGTGTTCG
CCGGACATCAGCTCGGCGCCGGCACCGCCGCCTTCGGCGCCGGCCTGTCGCGCACCTTGCTGCAGAGCTATCTGCCGGCG
TTCTTCACCGCCGGCGCGCTCTGCATCATCGCAGCGCTCCTCGCGCTCGCCATCGCGCGGCAGGCAAAGCCCGCCGCGGC
GTAA

Upstream 100 bases:

>100_bases
CTGGAGCGGCCGTGATGTCCAGAAACGAGGGAACATTGGCATTCATGTCGAACGCTCATTCTGGCAGGATGAGCAAGGCC
TCTCCAATCGGACGAACTCG

Downstream 100 bases:

>100_bases
CACTCACTACGGCCGCGTTGTCATCGCGGCCGGCGGTCCCGGCGTCCGCAACGGCTCGGCAAGACGCGCGAACTCGCAGA
GCAGCGCGCGCGTCTTGCGC

Product: MFS family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MISNQLAATLARRNIHYGWVMVAVTFFAALVSAGTVGAPGVFIVPLQQEFGWSTAEISSALSIRFVLFGLMAPFAAALLN
RYGLRNITLLAQLIVVSALLASLAMTQVWHLVLLWGVVIGIGTGMTALVLGATIATRWFVARRGLVVGILTASVATGQLV
FLPLLASLTERLGWRTALALVCVTLGVSATAVLLLMRDRPSDLGLRPFGDTGTEPIAAPPPVTTPILAAALGTLRDAVRV
PVFWMLFATFFICGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGMFDFVGTIVSGWLSDRYDNRWLLFWYYGLRGLS
LLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGPERANLVFGWVFAGHQLGAGTAAFGAGLSRTLLQSYLPA
FFTAGALCIIAALLALAIARQAKPAAA

Sequences:

>Translated_427_residues
MISNQLAATLARRNIHYGWVMVAVTFFAALVSAGTVGAPGVFIVPLQQEFGWSTAEISSALSIRFVLFGLMAPFAAALLN
RYGLRNITLLAQLIVVSALLASLAMTQVWHLVLLWGVVIGIGTGMTALVLGATIATRWFVARRGLVVGILTASVATGQLV
FLPLLASLTERLGWRTALALVCVTLGVSATAVLLLMRDRPSDLGLRPFGDTGTEPIAAPPPVTTPILAAALGTLRDAVRV
PVFWMLFATFFICGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGMFDFVGTIVSGWLSDRYDNRWLLFWYYGLRGLS
LLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGPERANLVFGWVFAGHQLGAGTAAFGAGLSRTLLQSYLPA
FFTAGALCIIAALLALAIARQAKPAAA
>Mature_427_residues
MISNQLAATLARRNIHYGWVMVAVTFFAALVSAGTVGAPGVFIVPLQQEFGWSTAEISSALSIRFVLFGLMAPFAAALLN
RYGLRNITLLAQLIVVSALLASLAMTQVWHLVLLWGVVIGIGTGMTALVLGATIATRWFVARRGLVVGILTASVATGQLV
FLPLLASLTERLGWRTALALVCVTLGVSATAVLLLMRDRPSDLGLRPFGDTGTEPIAAPPPVTTPILAAALGTLRDAVRV
PVFWMLFATFFICGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGMFDFVGTIVSGWLSDRYDNRWLLFWYYGLRGLS
LLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGPERANLVFGWVFAGHQLGAGTAAFGAGLSRTLLQSYLPA
FFTAGALCIIAALLALAIARQAKPAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI292781289, Length=373, Percent_Identity=23.3243967828418, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI40789261, Length=373, Percent_Identity=23.3243967828418, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI41327156, Length=213, Percent_Identity=29.1079812206573, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17550316, Length=160, Percent_Identity=30.625, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17557434, Length=146, Percent_Identity=30.8219178082192, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI32567122, Length=146, Percent_Identity=30.8219178082192, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17535933, Length=165, Percent_Identity=32.1212121212121, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI281360217, Length=182, Percent_Identity=29.1208791208791, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573971, Length=182, Percent_Identity=29.1208791208791, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24652823, Length=221, Percent_Identity=29.8642533936652, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45636; Mature: 45636

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNQLAATLARRNIHYGWVMVAVTFFAALVSAGTVGAPGVFIVPLQQEFGWSTAEISSA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCCCHHHHHHH
LSIRFVLFGLMAPFAAALLNRYGLRNITLLAQLIVVSALLASLAMTQVWHLVLLWGVVIG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTGMTALVLGATIATRWFVARRGLVVGILTASVATGQLVFLPLLASLTERLGWRTALAL
HCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VCVTLGVSATAVLLLMRDRPSDLGLRPFGDTGTEPIAAPPPVTTPILAAALGTLRDAVRV
HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
PVFWMLFATFFICGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGMFDFVGTIVSGWL
HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SDRYDNRWLLFWYYGLRGLSLLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRF
HCCCCCEEEEEEEHHHHCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEHHHC
GPERANLVFGWVFAGHQLGAGTAAFGAGLSRTLLQSYLPAFFTAGALCIIAALLALAIAR
CCCHHCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAKPAAA
CCCCCCC
>Mature Secondary Structure
MISNQLAATLARRNIHYGWVMVAVTFFAALVSAGTVGAPGVFIVPLQQEFGWSTAEISSA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCCCHHHHHHH
LSIRFVLFGLMAPFAAALLNRYGLRNITLLAQLIVVSALLASLAMTQVWHLVLLWGVVIG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTGMTALVLGATIATRWFVARRGLVVGILTASVATGQLVFLPLLASLTERLGWRTALAL
HCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VCVTLGVSATAVLLLMRDRPSDLGLRPFGDTGTEPIAAPPPVTTPILAAALGTLRDAVRV
HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
PVFWMLFATFFICGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGMFDFVGTIVSGWL
HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SDRYDNRWLLFWYYGLRGLSLLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRF
HCCCCCEEEEEEEHHHHCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEHHHC
GPERANLVFGWVFAGHQLGAGTAAFGAGLSRTLLQSYLPAFFTAGALCIIAALLALAIAR
CCCHHCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAKPAAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]