| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339955
Identifier: 146339955
GI number: 146339955
Start: 3157581
End: 3158138
Strand: Reverse
Name: 146339955
Synonym: BRADO2959
Alternate gene names: NA
Gene position: 3158138-3157581 (Counterclockwise)
Preceding gene: 146339958
Following gene: 146339954
Centisome position: 42.35
GC content: 68.64
Gene sequence:
>558_bases ATGAAACATCCGTCCAATCGCGAGCTCTTCGCCTATTGGAACGACAGGCGCGGCCACGCCAAGGCGCCTGAGCGCAGCGA GTTCGAACCGTCAGCCGTGCGCGAGCTGCTCGGCGACATCTTCGTGCTGTCGTGCGACGCCGAGTTGGGCTTTCCATTCC GCATGGCCGGCACGCGGCTGTGCGCCCTGCTCGGCGGCGACGTCAAGGACAAGAGTTTTCCGGCGCAGTTCACGCCGGCG AGCCGCCGCGAGATCGAGGAGATCGTCACTGTCGTCTCCGAGGAGACGCTGCCCGCGATCGCCGGCGTCAAGGCGCAGGC GCCGGATCGCACGACGGCGTCGTTCGAACTGCTGCTTCTGCCGTTCGCGACGCGCGCCCATGAGCCGATCAGCCTGACCG GCCTGCTCGCGCCGTTCGAGACGCCGCAAGGCGCGCTCGGGCCGCTCGAGGTCGTGTCCTGGCGCTACATCCATCCGCCC GTCGAGCCGATCGTGCCGCGCGCCTTGCGCAAGCTCGCGCTGGCCCGCGGCCTGATGGTGTATGAGGGCTTGCGCTGA
Upstream 100 bases:
>100_bases ACGCTGCACCGCCCCTCCTGCGACAACAATCCAGGGAGGCGCCTGGACGAAAGCGGGACAGCGATGTCCTGACGACGTCG AGGGCGCGAGGGGTCTTCAG
Downstream 100 bases:
>100_bases GGCGCTGACTCGTAGGGTGGGCAAAGGCGCGGCCGTGCTCTCACCACGCATTGCGCCGGGAGTGGCGCCGTGCCCACCAT CTCTCACAGAGTAAACCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRLCALLGGDVKDKSFPAQFTPA SRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLLPFATRAHEPISLTGLLAPFETPQGALGPLEVVSWRYIHPP VEPIVPRALRKLALARGLMVYEGLR
Sequences:
>Translated_185_residues MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRLCALLGGDVKDKSFPAQFTPA SRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLLPFATRAHEPISLTGLLAPFETPQGALGPLEVVSWRYIHPP VEPIVPRALRKLALARGLMVYEGLR >Mature_185_residues MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRLCALLGGDVKDKSFPAQFTPA SRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLLPFATRAHEPISLTGLLAPFETPQGALGPLEVVSWRYIHPP VEPIVPRALRKLALARGLMVYEGLR
Specific function: Unknown
COG id: COG5388
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20460; Mature: 20460
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRL CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHH CALLGGDVKDKSFPAQFTPASRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLL HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE PFATRAHEPISLTGLLAPFETPQGALGPLEVVSWRYIHPPVEPIVPRALRKLALARGLMV EHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHH YEGLR HCCCC >Mature Secondary Structure MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRL CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHH CALLGGDVKDKSFPAQFTPASRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLL HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE PFATRAHEPISLTGLLAPFETPQGALGPLEVVSWRYIHPPVEPIVPRALRKLALARGLMV EHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHH YEGLR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA