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The map label for this gene is rssA [H]

Identifier: 146339958

GI number: 146339958

Start: 3160151

End: 3161161

Strand: Reverse

Name: rssA [H]

Synonym: BRADO2962

Alternate gene names: 146339958

Gene position: 3161161-3160151 (Counterclockwise)

Preceding gene: 146339961

Following gene: 146339955

Centisome position: 42.39

GC content: 68.74

Gene sequence:

>1011_bases
GTGCTGGATATGCTGATGGGACGCCGCCAGAGCGGAGATGGTACCAATGTCGGGCTCGGCACGATCCGCAAGCCGGTCAT
CGGGCTGGCGCTCGGCGGCGGCGCGGCGCGCGGCTTCGCCCATATCGGCGTGATCCGGACCCTGATGGCCCATGGGATCG
TGCCAGACGTCGTCGTCGGAACCTCGATCGGCGCGGTGGTCGGCGGTGCCTACGCGGCCGGCCAGCTCGACACGCTGGAG
GAATGGGCGCGCAGCCTGCAGATGCGCAGCGTGCTCGGCTATCTCGACATCCGCCTCAACGGCTCCGGCTTGATCGGCGG
CGAGAAGCTCGCAGCGCAGCTCGAGGCCTCGCTCGGCCGCGTCGCCATCGAGGAGCTGCCGATGAAGGTCGCGACCGTGG
CGACCGAGATCCGGACCGGGCATGAGATCTGGCTGACGCATGGCAGCCTGGTCGACGCGATGCGCGCCTCCTACGCTCTG
CCCGGTATCTTCGCGCCGGTCCTGATCGGCGATCGCTGGCTGGTCGACGGCGCCATGGTCAATCCGGTGCCGGTGTCGGC
GGCGCGCGCGCTGGGCGCCGAGATCGTCATTGCCGCCAATCTGTCCAGCGACGTGTTCACGCATTCGACGACGATCTATT
CGCATGGCCAGCCGGTCGAGGTGCCGGAGACGGTGATCGAGAGCACCCCGCCGAAACGCCGCTTCGGCAAGCTGTTCTCG
CCGGAGAAGGCGGTAAAGCGGCAGTTCTTCGGCGGCGGCGGCCGGCCCGGGATCTCCTCGGTGATGGTCGACGCCTTCAA
CATCATGCAGGACCGTATCACCCGCGCGCGGCTCGCCGGCGATCCGCCGGACCTGTTGATCTCGCCGCGCGTCGGCCAGA
TCGGCTGGTTCGATTTTCATCGCGCGGCCGATCTCATCGCGTTCGGCACCAAGGCGGCCGAACGAGCGCTGGATTCGATC
CATGAGGCGATCGGCGCGACCGCGCCGGCCGGCGGGACTACGCCGTCTTGA

Upstream 100 bases:

>100_bases
GCATGAAGGATGCTTCTGCTAGCTTGATCGCAGACGGGGCGACGACGCGGCCGCGGCGGCGGACCGCACGTCGCCGATTG
GCGTGAGCGTGGAGACGACG

Downstream 100 bases:

>100_bases
TGTACTGCCGCAGCGCTTCCTGCTCGTTCTCATATTCCTGGACGCGCCACTTCACGACGTCGCCGATCGAGATCAGGCCG
ACGACGAGGCCGCCCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLDMLMGRRQSGDGTNVGLGTIRKPVIGLALGGGAARGFAHIGVIRTLMAHGIVPDVVVGTSIGAVVGGAYAAGQLDTLE
EWARSLQMRSVLGYLDIRLNGSGLIGGEKLAAQLEASLGRVAIEELPMKVATVATEIRTGHEIWLTHGSLVDAMRASYAL
PGIFAPVLIGDRWLVDGAMVNPVPVSAARALGAEIVIAANLSSDVFTHSTTIYSHGQPVEVPETVIESTPPKRRFGKLFS
PEKAVKRQFFGGGGRPGISSVMVDAFNIMQDRITRARLAGDPPDLLISPRVGQIGWFDFHRAADLIAFGTKAAERALDSI
HEAIGATAPAGGTTPS

Sequences:

>Translated_336_residues
MLDMLMGRRQSGDGTNVGLGTIRKPVIGLALGGGAARGFAHIGVIRTLMAHGIVPDVVVGTSIGAVVGGAYAAGQLDTLE
EWARSLQMRSVLGYLDIRLNGSGLIGGEKLAAQLEASLGRVAIEELPMKVATVATEIRTGHEIWLTHGSLVDAMRASYAL
PGIFAPVLIGDRWLVDGAMVNPVPVSAARALGAEIVIAANLSSDVFTHSTTIYSHGQPVEVPETVIESTPPKRRFGKLFS
PEKAVKRQFFGGGGRPGISSVMVDAFNIMQDRITRARLAGDPPDLLISPRVGQIGWFDFHRAADLIAFGTKAAERALDSI
HEAIGATAPAGGTTPS
>Mature_336_residues
MLDMLMGRRQSGDGTNVGLGTIRKPVIGLALGGGAARGFAHIGVIRTLMAHGIVPDVVVGTSIGAVVGGAYAAGQLDTLE
EWARSLQMRSVLGYLDIRLNGSGLIGGEKLAAQLEASLGRVAIEELPMKVATVATEIRTGHEIWLTHGSLVDAMRASYAL
PGIFAPVLIGDRWLVDGAMVNPVPVSAARALGAEIVIAANLSSDVFTHSTTIYSHGQPVEVPETVIESTPPKRRFGKLFS
PEKAVKRQFFGGGGRPGISSVMVDAFNIMQDRITRARLAGDPPDLLISPRVGQIGWFDFHRAADLIAFGTKAAERALDSI
HEAIGATAPAGGTTPS

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=194, Percent_Identity=34.020618556701, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI260656041, Length=194, Percent_Identity=34.020618556701, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI116256487, Length=194, Percent_Identity=34.020618556701, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI260656037, Length=194, Percent_Identity=34.020618556701, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI260656043, Length=194, Percent_Identity=34.020618556701, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI148727335, Length=185, Percent_Identity=32.972972972973, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI148727290, Length=185, Percent_Identity=32.972972972973, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI226510936, Length=303, Percent_Identity=41.9141914191419, Blast_Score=219, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71997299, Length=202, Percent_Identity=29.7029702970297, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=202, Percent_Identity=29.7029702970297, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=182, Percent_Identity=30.2197802197802, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281376913, Length=184, Percent_Identity=32.6086956521739, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571388, Length=184, Percent_Identity=32.6086956521739, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 35213; Mature: 35213

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMLMGRRQSGDGTNVGLGTIRKPVIGLALGGGAARGFAHIGVIRTLMAHGIVPDVVVG
CCCCHHCCCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHH
TSIGAVVGGAYAAGQLDTLEEWARSLQMRSVLGYLDIRLNGSGLIGGEKLAAQLEASLGR
CHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHH
VAIEELPMKVATVATEIRTGHEIWLTHGSLVDAMRASYALPGIFAPVLIGDRWLVDGAMV
HHHHHHCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHCCEEEECCCEE
NPVPVSAARALGAEIVIAANLSSDVFTHSTTIYSHGQPVEVPETVIESTPPKRRFGKLFS
CCCCHHHHHHCCCEEEEEECCCCCHHCCCEEEEECCCCCCCHHHHHHCCCCHHHHHCCCC
PEKAVKRQFFGGGGRPGISSVMVDAFNIMQDRITRARLAGDPPDLLISPRVGQIGWFDFH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH
RAADLIAFGTKAAERALDSIHEAIGATAPAGGTTPS
HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLDMLMGRRQSGDGTNVGLGTIRKPVIGLALGGGAARGFAHIGVIRTLMAHGIVPDVVVG
CCCCHHCCCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHH
TSIGAVVGGAYAAGQLDTLEEWARSLQMRSVLGYLDIRLNGSGLIGGEKLAAQLEASLGR
CHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHH
VAIEELPMKVATVATEIRTGHEIWLTHGSLVDAMRASYALPGIFAPVLIGDRWLVDGAMV
HHHHHHCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHCCEEEECCCEE
NPVPVSAARALGAEIVIAANLSSDVFTHSTTIYSHGQPVEVPETVIESTPPKRRFGKLFS
CCCCHHHHHHCCCEEEEEECCCCCHHCCCEEEEECCCCCCCHHHHHHCCCCHHHHHCCCC
PEKAVKRQFFGGGGRPGISSVMVDAFNIMQDRITRARLAGDPPDLLISPRVGQIGWFDFH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH
RAADLIAFGTKAAERALDSIHEAIGATAPAGGTTPS
HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]