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The map label for this gene is yliD [C]

Identifier: 146339916

GI number: 146339916

Start: 3122059

End: 3122949

Strand: Reverse

Name: yliD [C]

Synonym: BRADO2920

Alternate gene names: 146339916

Gene position: 3122949-3122059 (Counterclockwise)

Preceding gene: 146339917

Following gene: 146339915

Centisome position: 41.88

GC content: 66.89

Gene sequence:

>891_bases
ATGGCGATCGTTACCACTCCAGAGCCGTCGATCCCGGTCACCACGCGACTGGGGCCCCGCTTCGGCTTTCTCACCTCGAC
CCCGATCATCGCGGTGGCCACCGTGTGCCTGACGCTGATCGTGATCGTGTCGATCCTGGCGCCGCTGCTGGCGCCGCATG
ATCCGGTGCTGCTGGCGCCGGCGCAGCGGCTTAAGCCGGCGAGCGCGCAGTACCTGCTCGGCACCGACGCTTATGGCCGC
GACCTGTTGTCGCGCACCATCTATGGCGGCCGCATCTCGCTCCTGGTGGGCGTTGGCGCCGCCGTCATCTCGATCGCGAT
CGGGCTGGTGATCGGCCTCGTCTCCGGCTTCTTCCGCTGGGTCGACGCCATCATGATGCGCGTGATGGACGGCCTGATGG
CGATCCCGAGCATCCTGCTCGCCATCGCCGTGGTGTCGCTGTCCGGCGCCAGCGTCGGCACCGTCATGATCGCGATCACC
ATCGTCGAGATCCCGCGCGTTGCGCGTCTCGTCCGCTCGGTCGTGCTCACCGCGCGCGAGGAGCCCTATGTCGAGGCCGC
GATTTCATTGGGCACATCGATGCCCAAGATCATGTGGCGGCACCTGATGCCGAACACGATCGCGCCGCTGATCGTGCAAG
GCACCTACATCTGCGCCGCCGCGATTCTCACCGAGGCGATCCTGTCGTTCCTCGGCGCCGGCATTAGCCCGGAGACGCCG
ACCTGGGGCAACATCATGGCCGAGGGCCGCTCCTACTTCCAGATCAAGCCGTCACTGATCTTCTGGCCGGGCCTGCTGCT
GTCGATCGCCATCCTCTCGATCAACCTGATCGGCGACGCCGCCCGCGATGCGCTCGACCCGCGCATGAAGCAGCGCGAGG
CCGGCAAGTGA

Upstream 100 bases:

>100_bases
TGATCCTGTTGACCTCGTTCATCTACCTCGCGGTCAATCTCCTGATCGACCTCGCCTACACCATACTCGATCCACGCATC
CGCTACTGAGGCCGCATCCG

Downstream 100 bases:

>100_bases
AACTGATTTTTCGTCATCGCGAGCGAAGCGACGCGATCCAGGGGCCGCGCCCGGAGCCCCTGGATTGCTTCGTCGCTTCG
CTCCTCGCAATGACGGTGGA

Product: putative ABC transporter permease membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MAIVTTPEPSIPVTTRLGPRFGFLTSTPIIAVATVCLTLIVIVSILAPLLAPHDPVLLAPAQRLKPASAQYLLGTDAYGR
DLLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRWVDAIMMRVMDGLMAIPSILLAIAVVSLSGASVGTVMIAIT
IVEIPRVARLVRSVVLTAREEPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETP
TWGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK

Sequences:

>Translated_296_residues
MAIVTTPEPSIPVTTRLGPRFGFLTSTPIIAVATVCLTLIVIVSILAPLLAPHDPVLLAPAQRLKPASAQYLLGTDAYGR
DLLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRWVDAIMMRVMDGLMAIPSILLAIAVVSLSGASVGTVMIAIT
IVEIPRVARLVRSVVLTAREEPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETP
TWGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK
>Mature_295_residues
AIVTTPEPSIPVTTRLGPRFGFLTSTPIIAVATVCLTLIVIVSILAPLLAPHDPVLLAPAQRLKPASAQYLLGTDAYGRD
LLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRWVDAIMMRVMDGLMAIPSILLAIAVVSLSGASVGTVMIAITI
VEIPRVARLVRSVVLTAREEPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETPT
WGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=260, Percent_Identity=39.6153846153846, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=36.3970588235294, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=41.0852713178295, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=34.8178137651822, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787498, Length=262, Percent_Identity=35.1145038167939, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787549, Length=257, Percent_Identity=35.0194552529183, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=31.4410480349345, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31386; Mature: 31255

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVTTPEPSIPVTTRLGPRFGFLTSTPIIAVATVCLTLIVIVSILAPLLAPHDPVLLAP
CEEECCCCCCCCEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
AQRLKPASAQYLLGTDAYGRDLLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRW
HHHCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDAIMMRVMDGLMAIPSILLAIAVVSLSGASVGTVMIAITIVEIPRVARLVRSVVLTARE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETP
CHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TWGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK
CCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
>Mature Secondary Structure 
AIVTTPEPSIPVTTRLGPRFGFLTSTPIIAVATVCLTLIVIVSILAPLLAPHDPVLLAP
EEECCCCCCCCEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
AQRLKPASAQYLLGTDAYGRDLLSRTIYGGRISLLVGVGAAVISIAIGLVIGLVSGFFRW
HHHCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDAIMMRVMDGLMAIPSILLAIAVVSLSGASVGTVMIAITIVEIPRVARLVRSVVLTARE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPYVEAAISLGTSMPKIMWRHLMPNTIAPLIVQGTYICAAAILTEAILSFLGAGISPETP
CHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TWGNIMAEGRSYFQIKPSLIFWPGLLLSIAILSINLIGDAARDALDPRMKQREAGK
CCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]