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The map label for this gene is yagS [H]

Identifier: 146339881

GI number: 146339881

Start: 3083851

End: 3084801

Strand: Direct

Name: yagS [H]

Synonym: BRADO2883

Alternate gene names: 146339881

Gene position: 3083851-3084801 (Clockwise)

Preceding gene: 146339880

Following gene: 146339882

Centisome position: 41.36

GC content: 67.4

Gene sequence:

>951_bases
ATGACGCCGTTCACCTATGAGCGCGCAGCCTCGCCAGCGCAGGCGGCCGCCGCCATCGCAGCCAAGCCGGGCGCCAAGTT
CATCGCCGGCGGGACCAATCTGCTGGATCTCATGAAGCTTCAGATCGAGGCGCCGACGCATCTGATCGACGTCAACGGAC
TGGCGCTGGACAGAATCGAGAGCACCGAAGACGGCGGGGTGCGGATCGGCGCGCTGGTGCGCAACACCGATCTCGCCGCC
GATGCACGCATCCGTCGCGACTACGGCCTGTTGTCGCGGGCGCTCGTTGCCGGAGCCACGGGACAGTTGCGCAACAAGGC
GACCACCGCCGGCAATCTGCTGCAACGGACGCGCTGCCCGTATTTCTATGACACCAACATGCCCTGCAACAAGCGCCGGC
CCGGCAGCGGCTGTGCCGCGATCGGCGGCTACAGCCGCCAGCTTGCAGTGATCGGTGCGAGCGAGGCCTGTATCGCGACG
CATCCGAGCGACATGGCGGTTGCCATGCGCGCGCTCGATGCAAGCATCGAAACGATCAGGCCGGACGGCACGGCACGGAA
CATTCCCATCGCGGCGTTCTATCGCGAGCCAGGCACCACGCCGCACCTCGAAACCGCGCTCTCATCAGATGAGCTGATCA
CCGCCGTGACCTTGCCGAAGCCGATCGGCGGAGCGCAGATCTATCAGAAGGTGCGCGACCGCGCGTCCTACGCGTTTGCG
CTGGTCGCGGTGGCCGCGGTGATTCAGCCCGATGGAACGGGACGGGTGGCGCTGGGCGGCGTCGCGCACAAGCCATGGCG
AAGCGCGGATGCCGATGCCGAGATGAGGCGTGGCGCGAAGGCCGTGACCGCGCGGCTGCTGGCCGACGCCAAGCCGACGC
ACGACAACAGCTTCAAGATCCGCCTTGCCGAGCGCACCCTCGGCGCGGTTCTGGCCCAAGCACGAGGCTGA

Upstream 100 bases:

>100_bases
CCAGGGACGAGCTGCGCGAGCGGATGAGCGGCAACATCTGCCGTTGCGGCGCCTATTCCAACATCGCCGAGGCGATCCTC
GAAGTCGCGGAGAACAAGGC

Downstream 100 bases:

>100_bases
CCATGAAGTTCGAGACGCCCGCGACGACCAACCCGATCGATCAGCAGAAGGTGGTCGGCAAGCCGACCGACCGCATCGAC
GGCCGCTTCAAGGTGACGGG

Product: putative xanthine dehydrogenase, FAD binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTPFTYERAASPAQAAAAIAAKPGAKFIAGGTNLLDLMKLQIEAPTHLIDVNGLALDRIESTEDGGVRIGALVRNTDLAA
DARIRRDYGLLSRALVAGATGQLRNKATTAGNLLQRTRCPYFYDTNMPCNKRRPGSGCAAIGGYSRQLAVIGASEACIAT
HPSDMAVAMRALDASIETIRPDGTARNIPIAAFYREPGTTPHLETALSSDELITAVTLPKPIGGAQIYQKVRDRASYAFA
LVAVAAVIQPDGTGRVALGGVAHKPWRSADADAEMRRGAKAVTARLLADAKPTHDNSFKIRLAERTLGAVLAQARG

Sequences:

>Translated_316_residues
MTPFTYERAASPAQAAAAIAAKPGAKFIAGGTNLLDLMKLQIEAPTHLIDVNGLALDRIESTEDGGVRIGALVRNTDLAA
DARIRRDYGLLSRALVAGATGQLRNKATTAGNLLQRTRCPYFYDTNMPCNKRRPGSGCAAIGGYSRQLAVIGASEACIAT
HPSDMAVAMRALDASIETIRPDGTARNIPIAAFYREPGTTPHLETALSSDELITAVTLPKPIGGAQIYQKVRDRASYAFA
LVAVAAVIQPDGTGRVALGGVAHKPWRSADADAEMRRGAKAVTARLLADAKPTHDNSFKIRLAERTLGAVLAQARG
>Mature_315_residues
TPFTYERAASPAQAAAAIAAKPGAKFIAGGTNLLDLMKLQIEAPTHLIDVNGLALDRIESTEDGGVRIGALVRNTDLAAD
ARIRRDYGLLSRALVAGATGQLRNKATTAGNLLQRTRCPYFYDTNMPCNKRRPGSGCAAIGGYSRQLAVIGASEACIATH
PSDMAVAMRALDASIETIRPDGTARNIPIAAFYREPGTTPHLETALSSDELITAVTLPKPIGGAQIYQKVRDRASYAFAL
VAVAAVIQPDGTGRVALGGVAHKPWRSADADAEMRRGAKAVTARLLADAKPTHDNSFKIRLAERTLGAVLAQARG

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=315, Percent_Identity=72.6984126984127, Blast_Score=473, Evalue=1e-135,
Organism=Escherichia coli, GI1789231, Length=329, Percent_Identity=26.1398176291793, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 33310; Mature: 33179

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFTYERAASPAQAAAAIAAKPGAKFIAGGTNLLDLMKLQIEAPTHLIDVNGLALDRIE
CCCCCCHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHEEECCCCEEEECCCEEEECCC
STEDGGVRIGALVRNTDLAADARIRRDYGLLSRALVAGATGQLRNKATTAGNLLQRTRCP
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
YFYDTNMPCNKRRPGSGCAAIGGYSRQLAVIGASEACIATHPSDMAVAMRALDASIETIR
EEEECCCCCCCCCCCCCCEEECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHEEC
PDGTARNIPIAAFYREPGTTPHLETALSSDELITAVTLPKPIGGAQIYQKVRDRASYAFA
CCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
LVAVAAVIQPDGTGRVALGGVAHKPWRSADADAEMRRGAKAVTARLLADAKPTHDNSFKI
HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
RLAERTLGAVLAQARG
EEHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPFTYERAASPAQAAAAIAAKPGAKFIAGGTNLLDLMKLQIEAPTHLIDVNGLALDRIE
CCCCCHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHEEECCCCEEEECCCEEEECCC
STEDGGVRIGALVRNTDLAADARIRRDYGLLSRALVAGATGQLRNKATTAGNLLQRTRCP
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
YFYDTNMPCNKRRPGSGCAAIGGYSRQLAVIGASEACIATHPSDMAVAMRALDASIETIR
EEEECCCCCCCCCCCCCCEEECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHEEC
PDGTARNIPIAAFYREPGTTPHLETALSSDELITAVTLPKPIGGAQIYQKVRDRASYAFA
CCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
LVAVAAVIQPDGTGRVALGGVAHKPWRSADADAEMRRGAKAVTARLLADAKPTHDNSFKI
HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
RLAERTLGAVLAQARG
EEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]