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The map label for this gene is yagT [H]

Identifier: 146339880

GI number: 146339880

Start: 3083207

End: 3083854

Strand: Direct

Name: yagT [H]

Synonym: BRADO2882

Alternate gene names: 146339880

Gene position: 3083207-3083854 (Clockwise)

Preceding gene: 146339879

Following gene: 146339881

Centisome position: 41.35

GC content: 65.74

Gene sequence:

>648_bases
ATGGAAAACCCGCCCTTCAGATTCAATCGGCGCGACCTGATGGTCGGCGGCGCCGCCTCCGTCGCCGGGATGGCCCTGTT
GCGGGCTGGTGTGCCCGGTGCATTGGCCGCCGAGCCGCTTGCTTCGGTGCCGCCGGCGACCGCCAAGGTGTCGTTCACGG
TCAACGGCCGCCCGCAGGAACTCGTGCTCGACACGCGCACGACGTTGCTCGACGCTCTGCGCGAGCATCTGCAACTGACC
GGAACCAAGAAGGGCTGCGATCACGGCCAGTGCGGCGCATGCACGGTCCATGTCGACGGACGACGCGTCAATTCCTGCCT
GAGCCTCGCGGTCATGCACGAGGGCGATCCCGTCACCACGATCGAAGGCATCGGTACGCCGGATCATCTCGCGCCGATGC
AGGCCGCCTTCATCAAGCACGACGGCTTTCAATGCGGCTACTGCACGCCCGGGCAGATCTGCTCGGCGGTCGCCGTGCTC
GATGAGATCAAGGCCGGCATTCCAAGCCATGTCACGGGCAGCCTGACCGAAACGCCGCAACTGACCAGGGACGAGCTGCG
CGAGCGGATGAGCGGCAACATCTGCCGTTGCGGCGCCTATTCCAACATCGCCGAGGCGATCCTCGAAGTCGCGGAGAACA
AGGCATGA

Upstream 100 bases:

>100_bases
TCCGGCGGCGAGACGACGCACCTCGAGTTGTGATCGCGATCGGGAAACTCGCGGGTGGGGGACGCGTTGCCCCTCGAACT
TCGCGAGCCCGGACCACGTC

Downstream 100 bases:

>100_bases
CGCCGTTCACCTATGAGCGCGCAGCCTCGCCAGCGCAGGCGGCCGCCGCCATCGCAGCCAAGCCGGGCGCCAAGTTCATC
GCCGGCGGGACCAATCTGCT

Product: putative oxidoreductase iron-sulfur-binding protein subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MENPPFRFNRRDLMVGGAASVAGMALLRAGVPGALAAEPLASVPPATAKVSFTVNGRPQELVLDTRTTLLDALREHLQLT
GTKKGCDHGQCGACTVHVDGRRVNSCLSLAVMHEGDPVTTIEGIGTPDHLAPMQAAFIKHDGFQCGYCTPGQICSAVAVL
DEIKAGIPSHVTGSLTETPQLTRDELRERMSGNICRCGAYSNIAEAILEVAENKA

Sequences:

>Translated_215_residues
MENPPFRFNRRDLMVGGAASVAGMALLRAGVPGALAAEPLASVPPATAKVSFTVNGRPQELVLDTRTTLLDALREHLQLT
GTKKGCDHGQCGACTVHVDGRRVNSCLSLAVMHEGDPVTTIEGIGTPDHLAPMQAAFIKHDGFQCGYCTPGQICSAVAVL
DEIKAGIPSHVTGSLTETPQLTRDELRERMSGNICRCGAYSNIAEAILEVAENKA
>Mature_215_residues
MENPPFRFNRRDLMVGGAASVAGMALLRAGVPGALAAEPLASVPPATAKVSFTVNGRPQELVLDTRTTLLDALREHLQLT
GTKKGCDHGQCGACTVHVDGRRVNSCLSLAVMHEGDPVTTIEGIGTPDHLAPMQAAFIKHDGFQCGYCTPGQICSAVAVL
DEIKAGIPSHVTGSLTETPQLTRDELRERMSGNICRCGAYSNIAEAILEVAENKA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=175, Percent_Identity=36.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI71773480, Length=171, Percent_Identity=38.0116959064327, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1786480, Length=176, Percent_Identity=67.6136363636364, Blast_Score=253, Evalue=8e-69,
Organism=Escherichia coli, GI1789232, Length=168, Percent_Identity=38.0952380952381, Blast_Score=105, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17540638, Length=175, Percent_Identity=36.5714285714286, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI32566215, Length=169, Percent_Identity=32.5443786982249, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17539860, Length=176, Percent_Identity=32.3863636363636, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17737937, Length=166, Percent_Identity=42.1686746987952, Blast_Score=94, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24647199, Length=168, Percent_Identity=33.9285714285714, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24647197, Length=176, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24647195, Length=176, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24647201, Length=169, Percent_Identity=33.7278106508876, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24647193, Length=173, Percent_Identity=32.9479768786127, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 22674; Mature: 22674

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPPFRFNRRDLMVGGAASVAGMALLRAGVPGALAAEPLASVPPATAKVSFTVNGRPQE
CCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHCCHHCCCCCCEEEEEEECCCCCE
LVLDTRTTLLDALREHLQLTGTKKGCDHGQCGACTVHVDGRRVNSCLSLAVMHEGDPVTT
EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHEEECCCCEEE
IEGIGTPDHLAPMQAAFIKHDGFQCGYCTPGQICSAVAVLDEIKAGIPSHVTGSLTETPQ
EECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LTRDELRERMSGNICRCGAYSNIAEAILEVAENKA
CCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENPPFRFNRRDLMVGGAASVAGMALLRAGVPGALAAEPLASVPPATAKVSFTVNGRPQE
CCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHCCHHCCCCCCEEEEEEECCCCCE
LVLDTRTTLLDALREHLQLTGTKKGCDHGQCGACTVHVDGRRVNSCLSLAVMHEGDPVTT
EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHEEECCCCEEE
IEGIGTPDHLAPMQAAFIKHDGFQCGYCTPGQICSAVAVLDEIKAGIPSHVTGSLTETPQ
EECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LTRDELRERMSGNICRCGAYSNIAEAILEVAENKA
CCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]