| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339879
Identifier: 146339879
GI number: 146339879
Start: 3081133
End: 3082329
Strand: Direct
Name: 146339879
Synonym: BRADO2881
Alternate gene names: NA
Gene position: 3081133-3082329 (Clockwise)
Preceding gene: 146339878
Following gene: 146339880
Centisome position: 41.32
GC content: 67.25
Gene sequence:
>1197_bases ATGAGTAACAGTCGAGCTGCGTTGGCCGCACGAAATCGCAGGAAGTCCTCCCTGGTCGCTTTCTCTCACAAATTGATCGG TGGCGCGGCAGTGGCCTGCCTGATCGGCGGCTGCGCGTTGACGGTCTACACCAAGATCATCGCTGCCGACGCCTATCCGA CTCTGGGAAGCATCGAGCAGGACGAGCCCGTCGTGCGCCCGGCGCCGCGGATCGCAACGCGCAGCGCGGCCGACGCGGTG GGCGATGCCTTCTCCGCATTCCCCGAAACACCGGCCGCGGCCACCACCACGGTTGCCGCCATCACGCCGCAGATGTTCAA CGACCGCTTCGGCGCGGCCGTGCCGCAGGGCATCGCCTCCAATGCCGCCGCTGGCGCGCCGCCGCTGCCCAGGTTCGCGG AGGCGGCTCCGCCCAAGCTGCTCGAGGCCAAGCCGGTGGAAACCAAGCCGGTGGAAACCAAGCCGGCCGAAACCGCGAAG GTCGCCGAGGCGCCCAAGAAGGACGTCCGCCCGCCAATGCAGCTGGCGCTGGCCAACACCAATCCGAAGCAGCCCCCGAA GCCGCAGGCTGACGCGCCGGCGCAGGCGGCCGAGGCCAATGTGCCGAAGAGTGGCGGCTTCTCGTTGCGGGCCATGACCG AGCGCGCCAAGGCGGCGGTGCTGTCGATCGCCGGCGAGCGGCATTCGATCCAGGAGAAGCTGTGGGGCAAGCCGGAGAAC CAGGATGGCGGCTTGCTGGCCTATGCCTCGGCGGACTCCAACATCACCGCTTCGATCACCAAGGATCCGACCCGTGGCGG CCGGCCGCCTTATGACCTGAGCACCGCGGTCTACGACATCTCCGCCAAGGCGGTCTATCTGCCTGACGGCACGAAGCTCG AAGCGCATTCGGGCCTCGGCGACAATCTCGACGATCCCCGCTCCGAGAAGGTCAAGATGCGCGGCGTGACGCCGCCACAC ATCTATGAGTTGAAACCGCGCGAGGCGCTGTTCCACGGCGTGCCGGCGCTCCGGCTGAACCCGATCGGCGGCGAGGAAGC CATTCACGGCCGCAACGGGCTGTTGGCGCACACCTTCATGCTCGGACCGAACGGGGACTCCAACGGCTGCGTCTCGTTCC GCGATTACTACGCGTTCCTCGATGCCTACAAGAACAAGGGCATCCGCAAGCTGGCCGTACTCGCCCGCATCGACTGA
Upstream 100 bases:
>100_bases AAAGTCGCCTTAATGAAGCTCAGTGCTTCTGCGAGATGCAAAGCGGGTGTCCGTGGCGCATCGCGCGAAAGTTTTCGAGT ATTCGTTCGGGCGTGAGTGA
Downstream 100 bases:
>100_bases GCCGGGCAGGGGACGCGTTCTCGTTGATGGGCCGTAGGGCGGGAAAAGGCGCGGTACCTGTCGCCCCTCGCGAACACTCT TAATTGGCGCCGTGCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSNSRAALAARNRRKSSLVAFSHKLIGGAAVACLIGGCALTVYTKIIAADAYPTLGSIEQDEPVVRPAPRIATRSAADAV GDAFSAFPETPAAATTTVAAITPQMFNDRFGAAVPQGIASNAAAGAPPLPRFAEAAPPKLLEAKPVETKPVETKPAETAK VAEAPKKDVRPPMQLALANTNPKQPPKPQADAPAQAAEANVPKSGGFSLRAMTERAKAAVLSIAGERHSIQEKLWGKPEN QDGGLLAYASADSNITASITKDPTRGGRPPYDLSTAVYDISAKAVYLPDGTKLEAHSGLGDNLDDPRSEKVKMRGVTPPH IYELKPREALFHGVPALRLNPIGGEEAIHGRNGLLAHTFMLGPNGDSNGCVSFRDYYAFLDAYKNKGIRKLAVLARID
Sequences:
>Translated_398_residues MSNSRAALAARNRRKSSLVAFSHKLIGGAAVACLIGGCALTVYTKIIAADAYPTLGSIEQDEPVVRPAPRIATRSAADAV GDAFSAFPETPAAATTTVAAITPQMFNDRFGAAVPQGIASNAAAGAPPLPRFAEAAPPKLLEAKPVETKPVETKPAETAK VAEAPKKDVRPPMQLALANTNPKQPPKPQADAPAQAAEANVPKSGGFSLRAMTERAKAAVLSIAGERHSIQEKLWGKPEN QDGGLLAYASADSNITASITKDPTRGGRPPYDLSTAVYDISAKAVYLPDGTKLEAHSGLGDNLDDPRSEKVKMRGVTPPH IYELKPREALFHGVPALRLNPIGGEEAIHGRNGLLAHTFMLGPNGDSNGCVSFRDYYAFLDAYKNKGIRKLAVLARID >Mature_397_residues SNSRAALAARNRRKSSLVAFSHKLIGGAAVACLIGGCALTVYTKIIAADAYPTLGSIEQDEPVVRPAPRIATRSAADAVG DAFSAFPETPAAATTTVAAITPQMFNDRFGAAVPQGIASNAAAGAPPLPRFAEAAPPKLLEAKPVETKPVETKPAETAKV AEAPKKDVRPPMQLALANTNPKQPPKPQADAPAQAAEANVPKSGGFSLRAMTERAKAAVLSIAGERHSIQEKLWGKPENQ DGGLLAYASADSNITASITKDPTRGGRPPYDLSTAVYDISAKAVYLPDGTKLEAHSGLGDNLDDPRSEKVKMRGVTPPHI YELKPREALFHGVPALRLNPIGGEEAIHGRNGLLAHTFMLGPNGDSNGCVSFRDYYAFLDAYKNKGIRKLAVLARID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41861; Mature: 41730
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSRAALAARNRRKSSLVAFSHKLIGGAAVACLIGGCALTVYTKIIAADAYPTLGSIEQ CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DEPVVRPAPRIATRSAADAVGDAFSAFPETPAAATTTVAAITPQMFNDRFGAAVPQGIAS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCHHCCCCCCCHHC NAAAGAPPLPRFAEAAPPKLLEAKPVETKPVETKPAETAKVAEAPKKDVRPPMQLALANT CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCEEEEEECC NPKQPPKPQADAPAQAAEANVPKSGGFSLRAMTERAKAAVLSIAGERHSIQEKLWGKPEN CCCCCCCCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC QDGGLLAYASADSNITASITKDPTRGGRPPYDLSTAVYDISAKAVYLPDGTKLEAHSGLG CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEECCCCC DNLDDPRSEKVKMRGVTPPHIYELKPREALFHGVPALRLNPIGGEEAIHGRNGLLAHTFM CCCCCCCCCCEEECCCCCCCEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEE LGPNGDSNGCVSFRDYYAFLDAYKNKGIRKLAVLARID ECCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure SNSRAALAARNRRKSSLVAFSHKLIGGAAVACLIGGCALTVYTKIIAADAYPTLGSIEQ CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DEPVVRPAPRIATRSAADAVGDAFSAFPETPAAATTTVAAITPQMFNDRFGAAVPQGIAS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCHHCCCCCCCHHC NAAAGAPPLPRFAEAAPPKLLEAKPVETKPVETKPAETAKVAEAPKKDVRPPMQLALANT CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCEEEEEECC NPKQPPKPQADAPAQAAEANVPKSGGFSLRAMTERAKAAVLSIAGERHSIQEKLWGKPEN CCCCCCCCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC QDGGLLAYASADSNITASITKDPTRGGRPPYDLSTAVYDISAKAVYLPDGTKLEAHSGLG CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEEECCCCC DNLDDPRSEKVKMRGVTPPHIYELKPREALFHGVPALRLNPIGGEEAIHGRNGLLAHTFM CCCCCCCCCCEEECCCCCCCEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEE LGPNGDSNGCVSFRDYYAFLDAYKNKGIRKLAVLARID ECCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA