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The map label for this gene is rpe [H]

Identifier: 146339841

GI number: 146339841

Start: 3043910

End: 3044611

Strand: Reverse

Name: rpe [H]

Synonym: BRADO2842

Alternate gene names: 146339841

Gene position: 3044611-3043910 (Counterclockwise)

Preceding gene: 146339843

Following gene: 146339840

Centisome position: 40.83

GC content: 67.66

Gene sequence:

>702_bases
ATGACCCAGTCCTTCACGCCGCGTCCGCTCGTCATCGCGCCATCGATCCTGGCCTCCGATTTCGCCAAGCTCGGCGAGGA
GGTGCGCGCCGTCGACGCCGCGGGCGCCGACTGGATTCATCTCGATGTGATGGACGGCCATTTCGTCCCGAACATTTCCT
ACGGCCCGGATGTCATCAAGGCGCTGCGCCCGCACACGACCAAGATCTTCGACGCGCATCTGATGATCACGCCGTGCGAC
CCGTATCTCGAGGCCTTCGCCAAGGCCGGCTGCGACCACATCACGGTGCATGCCGAGGCAGGTCCCCATCTGCATCGCTC
GCTGCAGGCGATCCGCGCGCTGGGCAAGAAGGCCGGCGTCTCGCTCAATCCGTCGACACCGCTGAATGTGATCGAGTACG
TGCTCGACCTCGTCGACCTCGTGCTGATCATGTCGGTCAACCCCGGCTTCGGCGGCCAGGCCTTCATCGCCTCGGCGATC
GGCAAGGTCCAGGACCTGCGCGCGATGACCGCGGGCCGGCCGATCGACATCGAGGTCGACGGCGGCGTCGGCCGCGACAA
TGCCGGCGCGCTCGCGGCCGCCGGCGCCAACGCCTTCGTCGCCGGCTCCGCCGTGTTCAAGGGCGGCACGATGGAAGCCT
ATCGCAGCAACATCGCCGCGATCCGTGATGCCGCCGCGACGGCGCGCGGCGAAGCGATCTGA

Upstream 100 bases:

>100_bases
GGCACTTCCTGCCGCACCCGGCAGATTTTTCCCGCTCGCGTTGCCGCAGCCGGCCCTGCATGATACGGCGACATCCCCGA
TCGTCCTGGAACAGCCGCCC

Downstream 100 bases:

>100_bases
GGCGATCGACGGCTCATGCATATGCTCACACCGCGGCCGCTGACGAAGGCGGCCTTCGCTGCCTTCGGCGACGTCGTCGA
GACCGACGGCGCCCCGCCGA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTQSFTPRPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTTKIFDAHLMITPCD
PYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAI
GKVQDLRAMTAGRPIDIEVDGGVGRDNAGALAAAGANAFVAGSAVFKGGTMEAYRSNIAAIRDAAATARGEAI

Sequences:

>Translated_233_residues
MTQSFTPRPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTTKIFDAHLMITPCD
PYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAI
GKVQDLRAMTAGRPIDIEVDGGVGRDNAGALAAAGANAFVAGSAVFKGGTMEAYRSNIAAIRDAAATARGEAI
>Mature_232_residues
TQSFTPRPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTTKIFDAHLMITPCDP
YLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAIG
KVQDLRAMTAGRPIDIEVDGGVGRDNAGALAAAGANAFVAGSAVFKGGTMEAYRSNIAAIRDAAATARGEAI

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=219, Percent_Identity=41.0958904109589, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI219879828, Length=219, Percent_Identity=39.2694063926941, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=32.7586206896552, Blast_Score=88, Evalue=6e-18,
Organism=Escherichia coli, GI1789788, Length=221, Percent_Identity=47.9638009049774, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1790523, Length=229, Percent_Identity=35.8078602620087, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1790754, Length=212, Percent_Identity=31.1320754716981, Blast_Score=97, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=226, Percent_Identity=40.2654867256637, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=209, Percent_Identity=42.1052631578947, Blast_Score=164, Evalue=9e-42,
Organism=Drosophila melanogaster, GI24586301, Length=195, Percent_Identity=41.025641025641, Blast_Score=149, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24318; Mature: 24187

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSFTPRPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIK
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHH
ALRPHTTKIFDAHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV
HHCCCCCEEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
SLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAIGKVQDLRAMTAGRPIDIEVD
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GGVGRDNAGALAAAGANAFVAGSAVFKGGTMEAYRSNIAAIRDAAATARGEAI
CCCCCCCCCEEEECCCCCEEECCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQSFTPRPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIK
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHH
ALRPHTTKIFDAHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV
HHCCCCCEEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
SLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAIGKVQDLRAMTAGRPIDIEVD
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GGVGRDNAGALAAAGANAFVAGSAVFKGGTMEAYRSNIAAIRDAAATARGEAI
CCCCCCCCCEEEECCCCCEEECCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA