Click here to switch to the map view.

The map label for this gene is cycK [H]

Identifier: 146339736

GI number: 146339736

Start: 2935813

End: 2937792

Strand: Direct

Name: cycK [H]

Synonym: BRADO2734

Alternate gene names: 146339736

Gene position: 2935813-2937792 (Clockwise)

Preceding gene: 146339735

Following gene: 146339737

Centisome position: 39.37

GC content: 67.27

Gene sequence:

>1980_bases
GTGATTGCAGAGAGTGGACATTATGCCCTGGTGCTGGCGCTCGCGCTGGCGCTGATCCAGTCGACGGTGCCGATGCTCGG
CGCCCATCAACGCGACGTCGCGCTGATGAATGTCGGCCGCTCGGCGGCGCTGGCGCAATTGCTGTTCGCCGGCCTGTCCT
TCATCGCGCTGATCACCTTGCACGTGACCTCGGATTTCTCCGTCGCCAACGTGTTCGAGAACTCGCACTCGATGAAGCCG
CTGCTCTACAAGATCACCGGCGTGTGGGGGAACCATGAAGGCTCGATGCTGCTGTGGGTGTCGATCCTGGCGCTGTTCGG
CGCCATGGTCGCGGCCTTCGGCAACAATCTGCCGCTGTCGCTGCGCGCCCGTGTTCTCTCCGTGCAGGCCTGGGTCGCGA
GCGCGTTCTATCTGTTCATCCTGACCACCTCGAATCCCTTTGCCCGTCTGGCCAATCCGCCGATCGAGGGCCGCGACCTC
AATCCCGTGCTGCAGGACATCGGCCTCGCCGTGCATCCGCCGATGCTCTATCTCGGCTATGTCGGCTTCTCGATCTCGTT
CTCCTTCGCGATCGCGGCGCTGATCGAGGGCCGCATCGATGCGGCCTGGGCACGCTGGGTGCGGCCGTGGACGCTGATGG
CCTGGATCTTCCTCACGCTCGGCATCGCCATGGGCTCGTACTGGGCCTATTACGAGCTCGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTCGAGAACGCCTCGCTGATGCCCTGGCTCGCCGGCACCGCGCTGCTGCACTCCGCGCTCGTGATGGAGAA
GCGCAACGCGCTCAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCCTTGCTCGGCACCTTCCTGGTTC
GCTCCGGCGTCATCACCTCGGTGCACGCCTTCGCCAGCGATCCCACGCGCGGCGTCTTCATCCTCGGCATCCTTGTGCTG
TTCATCGGCGGCAGCCTGACCTTGTTCGCCGGCCGCGCCACCGCGCTGAAGCAGGGCGGGCTGTTCGCGCCGATCTCGCG
CGAGGGCGCGCTGGTGCTGAACAATCTGCTGCTGACCGTGAGCTGCGCCACCGTGCTGTTCGGCACGCTCTATCCCGTCA
TCATGGAAACGCTCGACTTCAAGCTCTCGGTCGGCGCGCCGTTCTACAACCTCACCTTCGGTCCCTTGTTCGCACTGCTG
CTCCTGATCGTGCCGTTCGGCCCGATGCTGGCGTGGAAGCGCGGTGATCTCGTCGCGGCGACGCAGCGGCTGCTCGCCGC
CGGCGTGGTCTCGCTGGTCGCGATCGCGATTGCCTGGGCGTGGGCGCGCGGCGGCAGCGCGCTGGCGCCGCTCGGCATCG
GTTTGGGCGTATTCGTCATCACAGGCGCCATCGTCGATCTGGTCGAGCGCAGCGGCATCACCCGCGTGCCGTTCAAGACG
GCGCTGCACCGGACCCGCGGCCTGCCGCGCTCGGTGTGGGGCACGGCCTTCGCCCATGCCGGCCTCGGCGTGGCGCTGCT
CGGCATCGTCTGCGAGACCACCTGGAACAGCGAGCTGATCTCGACCTTGCGTCCGGGCGACATGCGCAATCTCGCCGGCT
ACCAGATCAAGTTCGACGGCATGACCCAGCGCCAGGGCCCGAACTTCACGGAAGTCATCAGCACCTTCGTCGTCAGCGAG
GACGGCAGGCAGCTCGCGGTGATGACGCCGAGCAAGCGCAGCTTCGCCACCCGCGGCATGTCGACCACGGAAGCCGCGCT
GCTGACCCGCGGTGTCAGCCAGCTCTACGTCTCGCTCGGCGACACCACCGCCGATGGCGGCCTCGCGGTGCGCATCTATC
ACAAGCCGCTGGTGCTCCTGATCTGGTTCGGCCCGGTGCTGATGGCGTTCGGCGGATTGCTGTCGCTGTCCGATCGCCGC
CTGCGTGTCGGCGCGCCGCGTCCGGCGCGTGCGGCGCGCGCGCTGCAGCCGGCGGAGTAG

Upstream 100 bases:

>100_bases
AGGGCCATTGGAAGGACGATTACGGCAAGCCGCAAGGCGCGGCCAAGCCGGGCGCGGTATCGATGCGTGAGGGCGAGAAG
ACGGCTGCAGGAGCGACGCA

Downstream 100 bases:

>100_bases
GGCGGATGCGACGTATTCTCGGCTCGATCGCGCTCGCGCTGTTGCTCATCAGCTCGCCCGTAGCGCATGCGGTGCAGCCC
GATGAGGTGATGTCGGACAC

Product: cytochrome c-type biogenesis protein cycK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MIAESGHYALVLALALALIQSTVPMLGAHQRDVALMNVGRSAALAQLLFAGLSFIALITLHVTSDFSVANVFENSHSMKP
LLYKITGVWGNHEGSMLLWVSILALFGAMVAAFGNNLPLSLRARVLSVQAWVASAFYLFILTTSNPFARLANPPIEGRDL
NPVLQDIGLAVHPPMLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF
WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVITSVHAFASDPTRGVFILGILVL
FIGGSLTLFAGRATALKQGGLFAPISREGALVLNNLLLTVSCATVLFGTLYPVIMETLDFKLSVGAPFYNLTFGPLFALL
LLIVPFGPMLAWKRGDLVAATQRLLAAGVVSLVAIAIAWAWARGGSALAPLGIGLGVFVITGAIVDLVERSGITRVPFKT
ALHRTRGLPRSVWGTAFAHAGLGVALLGIVCETTWNSELISTLRPGDMRNLAGYQIKFDGMTQRQGPNFTEVISTFVVSE
DGRQLAVMTPSKRSFATRGMSTTEAALLTRGVSQLYVSLGDTTADGGLAVRIYHKPLVLLIWFGPVLMAFGGLLSLSDRR
LRVGAPRPARAARALQPAE

Sequences:

>Translated_659_residues
MIAESGHYALVLALALALIQSTVPMLGAHQRDVALMNVGRSAALAQLLFAGLSFIALITLHVTSDFSVANVFENSHSMKP
LLYKITGVWGNHEGSMLLWVSILALFGAMVAAFGNNLPLSLRARVLSVQAWVASAFYLFILTTSNPFARLANPPIEGRDL
NPVLQDIGLAVHPPMLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF
WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVITSVHAFASDPTRGVFILGILVL
FIGGSLTLFAGRATALKQGGLFAPISREGALVLNNLLLTVSCATVLFGTLYPVIMETLDFKLSVGAPFYNLTFGPLFALL
LLIVPFGPMLAWKRGDLVAATQRLLAAGVVSLVAIAIAWAWARGGSALAPLGIGLGVFVITGAIVDLVERSGITRVPFKT
ALHRTRGLPRSVWGTAFAHAGLGVALLGIVCETTWNSELISTLRPGDMRNLAGYQIKFDGMTQRQGPNFTEVISTFVVSE
DGRQLAVMTPSKRSFATRGMSTTEAALLTRGVSQLYVSLGDTTADGGLAVRIYHKPLVLLIWFGPVLMAFGGLLSLSDRR
LRVGAPRPARAARALQPAE
>Mature_659_residues
MIAESGHYALVLALALALIQSTVPMLGAHQRDVALMNVGRSAALAQLLFAGLSFIALITLHVTSDFSVANVFENSHSMKP
LLYKITGVWGNHEGSMLLWVSILALFGAMVAAFGNNLPLSLRARVLSVQAWVASAFYLFILTTSNPFARLANPPIEGRDL
NPVLQDIGLAVHPPMLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF
WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVITSVHAFASDPTRGVFILGILVL
FIGGSLTLFAGRATALKQGGLFAPISREGALVLNNLLLTVSCATVLFGTLYPVIMETLDFKLSVGAPFYNLTFGPLFALL
LLIVPFGPMLAWKRGDLVAATQRLLAAGVVSLVAIAIAWAWARGGSALAPLGIGLGVFVITGAIVDLVERSGITRVPFKT
ALHRTRGLPRSVWGTAFAHAGLGVALLGIVCETTWNSELISTLRPGDMRNLAGYQIKFDGMTQRQGPNFTEVISTFVVSE
DGRQLAVMTPSKRSFATRGMSTTEAALLTRGVSQLYVSLGDTTADGGLAVRIYHKPLVLLIWFGPVLMAFGGLLSLSDRR
LRVGAPRPARAARALQPAE

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=648, Percent_Identity=44.5987654320988, Blast_Score=492, Evalue=1e-140,
Organism=Escherichia coli, GI1790511, Length=379, Percent_Identity=44.8548812664908, Blast_Score=258, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 70997; Mature: 70997

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAESGHYALVLALALALIQSTVPMLGAHQRDVALMNVGRSAALAQLLFAGLSFIALITL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HVTSDFSVANVFENSHSMKPLLYKITGVWGNHEGSMLLWVSILALFGAMVAAFGNNLPLS
HCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
LRARVLSVQAWVASAFYLFILTTSNPFARLANPPIEGRDLNPVLQDIGLAVHPPMLYLGY
HHHHHHHHHHHHHHEEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH
VGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEE
WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVITS
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VHAFASDPTRGVFILGILVLFIGGSLTLFAGRATALKQGGLFAPISREGALVLNNLLLTV
HHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHCCCEECCCCCCCHHHHHHHHHHH
SCATVLFGTLYPVIMETLDFKLSVGAPFYNLTFGPLFALLLLIVPFGPMLAWKRGDLVAA
HHHHHHHHHHHHHHHHHHCCEEECCCCEEECCHHHHHHHHHHHHCCCCHHEECCCCHHHH
TQRLLAAGVVSLVAIAIAWAWARGGSALAPLGIGLGVFVITGAIVDLVERSGITRVPFKT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALHRTRGLPRSVWGTAFAHAGLGVALLGIVCETTWNSELISTLRPGDMRNLAGYQIKFDG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEECC
MTQRQGPNFTEVISTFVVSEDGRQLAVMTPSKRSFATRGMSTTEAALLTRGVSQLYVSLG
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
DTTADGGLAVRIYHKPLVLLIWFGPVLMAFGGLLSLSDRRLRVGAPRPARAARALQPAE
CCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCHHCCCCCEEECCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MIAESGHYALVLALALALIQSTVPMLGAHQRDVALMNVGRSAALAQLLFAGLSFIALITL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HVTSDFSVANVFENSHSMKPLLYKITGVWGNHEGSMLLWVSILALFGAMVAAFGNNLPLS
HCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
LRARVLSVQAWVASAFYLFILTTSNPFARLANPPIEGRDLNPVLQDIGLAVHPPMLYLGY
HHHHHHHHHHHHHHEEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH
VGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEE
WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVITS
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VHAFASDPTRGVFILGILVLFIGGSLTLFAGRATALKQGGLFAPISREGALVLNNLLLTV
HHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHCCCEECCCCCCCHHHHHHHHHHH
SCATVLFGTLYPVIMETLDFKLSVGAPFYNLTFGPLFALLLLIVPFGPMLAWKRGDLVAA
HHHHHHHHHHHHHHHHHHCCEEECCCCEEECCHHHHHHHHHHHHCCCCHHEECCCCHHHH
TQRLLAAGVVSLVAIAIAWAWARGGSALAPLGIGLGVFVITGAIVDLVERSGITRVPFKT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALHRTRGLPRSVWGTAFAHAGLGVALLGIVCETTWNSELISTLRPGDMRNLAGYQIKFDG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEECC
MTQRQGPNFTEVISTFVVSEDGRQLAVMTPSKRSFATRGMSTTEAALLTRGVSQLYVSLG
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
DTTADGGLAVRIYHKPLVLLIWFGPVLMAFGGLLSLSDRRLRVGAPRPARAARALQPAE
CCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCHHCCCCCEEECCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7715601; 12597275 [H]