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The map label for this gene is cycL [H]

Identifier: 146339737

GI number: 146339737

Start: 2937798

End: 2938283

Strand: Direct

Name: cycL [H]

Synonym: BRADO2735

Alternate gene names: 146339737

Gene position: 2937798-2938283 (Clockwise)

Preceding gene: 146339736

Following gene: 146339738

Centisome position: 39.4

GC content: 70.37

Gene sequence:

>486_bases
ATGCGACGTATTCTCGGCTCGATCGCGCTCGCGCTGTTGCTCATCAGCTCGCCCGTAGCGCATGCGGTGCAGCCCGATGA
GGTGATGTCGGACACCGCCAAGGAGCAGCGCGCCCGAGCGCTGTCGCGCGAGCTGCGCTGCATGGTCTGCCAGAACCAGT
CGATCGACGATTCCGACGCGCCGCTGGCCCGCGACCTGCGCCTGCTGGTGCGCGAGCGTCTCGCGGCCGGCGACAGCGAC
AATCAGGTGCTGGATTTCCTGGTCGCGCGCTATGGCCAGTTCGTGCTGCTCAAGCCGCGCTTCGAGCGCCAGACCCTGCT
GCTCTGGCTGCTGCCCCCGGTGCTGCTGCTCGGCGGCGGCCTTGCGCTGTGGCTCCAGGTCCGCCGCCGCGGCCAGCGCG
GTGGCGATGCGATGCCGAAGCTGACGGCCGAAGAGGAAGCGCGCATCGCCGCGCTGCTGGCGGAACAGCAGCCGCCGGCG
ACGTGA

Upstream 100 bases:

>100_bases
CGTTCGGCGGATTGCTGTCGCTGTCCGATCGCCGCCTGCGTGTCGGCGCGCCGCGTCCGGCGCGTGCGGCGCGCGCGCTG
CAGCCGGCGGAGTAGGGCGG

Downstream 100 bases:

>100_bases
TTGCGCGCTGCTTCGGGTTGCCGCGCCGCGCCAGGCGCGGAGCCTTAGCCTCATGGTGAGGAGGCGCGTAGCGCCGTCTC
GAACCATGAGGCCACAGCGC

Product: cytochrome c-type biogenesis protein cycL

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRRILGSIALALLLISSPVAHAVQPDEVMSDTAKEQRARALSRELRCMVCQNQSIDDSDAPLARDLRLLVRERLAAGDSD
NQVLDFLVARYGQFVLLKPRFERQTLLLWLLPPVLLLGGGLALWLQVRRRGQRGGDAMPKLTAEEEARIAALLAEQQPPA
T

Sequences:

>Translated_161_residues
MRRILGSIALALLLISSPVAHAVQPDEVMSDTAKEQRARALSRELRCMVCQNQSIDDSDAPLARDLRLLVRERLAAGDSD
NQVLDFLVARYGQFVLLKPRFERQTLLLWLLPPVLLLGGGLALWLQVRRRGQRGGDAMPKLTAEEEARIAALLAEQQPPA
T
>Mature_161_residues
MRRILGSIALALLLISSPVAHAVQPDEVMSDTAKEQRARALSRELRCMVCQNQSIDDSDAPLARDLRLLVRERLAAGDSD
NQVLDFLVARYGQFVLLKPRFERQTLLLWLLPPVLLLGGGLALWLQVRRRGQRGGDAMPKLTAEEEARIAALLAEQQPPA
T

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=148, Percent_Identity=39.8648648648649, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17872; Mature: 17872

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRILGSIALALLLISSPVAHAVQPDEVMSDTAKEQRARALSRELRCMVCQNQSIDDSDA
CHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PLARDLRLLVRERLAAGDSDNQVLDFLVARYGQFVLLKPRFERQTLLLWLLPPVLLLGGG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCH
LALWLQVRRRGQRGGDAMPKLTAEEEARIAALLAEQQPPAT
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRILGSIALALLLISSPVAHAVQPDEVMSDTAKEQRARALSRELRCMVCQNQSIDDSDA
CHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PLARDLRLLVRERLAAGDSDNQVLDFLVARYGQFVLLKPRFERQTLLLWLLPPVLLLGGG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCH
LALWLQVRRRGQRGGDAMPKLTAEEEARIAALLAEQQPPAT
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7715601; 12597275 [H]