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The map label for this gene is 146339651

Identifier: 146339651

GI number: 146339651

Start: 2840305

End: 2841543

Strand: Reverse

Name: 146339651

Synonym: BRADO2644

Alternate gene names: NA

Gene position: 2841543-2840305 (Counterclockwise)

Preceding gene: 146339656

Following gene: 146339650

Centisome position: 38.11

GC content: 66.18

Gene sequence:

>1239_bases
ATGGAGCTGCTGCGCAAACTGGAGATCCTGGCCGATGCCGCCAAGTACGACGCGTCCTGCGCCTCCAGCGGTACGGAGAT
GCGGGATTCCCGTGACGGCAAGGGGCTCGGCTCGACGGCGCCCGGCATGGGCATCTGCCATTCCTATGCGCCGGACGGAC
GCTGCATCTCGCTGCTCAAGATTTTGCTGACCAACGCCTGCAACTTCGACTGCCTGTATTGCGTCAACCGCGCCTCCTCC
AACGTGCCGCGCGCGCGCTTCACGGTCGACGAAGTGGTGCAGCTGACGATCGACTTCTATCGCCGCAACTACATCGAGGG
GCTGTTCCTGTCGTCGGGCATCATCCGCAGCCCGGACTACACGATGGAGCAGGTCGTCTCCGTCGCACGCAAGCTGCGCG
AGGAGCATCGCTTCCGCGGCTACATTCATCTGAAGACAATTCCGGAGGCCGACGAGGCGCTGATCGCGGAGGCCGGCAAA
TATGCCGACCGGCTCAGCATCAATATCGAAACGCCGCTGGAGGACAGCCTCACAAAGCTCGCGCCGGAAAAGGACCAGCG
CGCGATCCGCCGCACCATGGGCCGCCTCCGGCTCAAGCTCGACGAGACGGCGGAGGCGAAGAAGACGGTGCGCCGCGCCC
GGCCGCCGCGCTTCGCGCCGGCCGGCCAGAGCACGCAGATGATCGTCGGTGCCGACACGGCGAACGACCGCACCATCCTG
TCGACCTCGGCCAATCTCTACGGCGCCTACAAGCTCAAGCGCGTCTATTACTCGGCCTTCAGCCCGATCCCCGACGCGAG
CCGCGCGCTGCCGCTGCAGGCCCCGCCGCTTGTGCGCGAGCACCGGCTGTACCAGGCCGACTGGCTGATGCGGTTCTACG
GCTTCGATGCCGAGGAGATCGTCGAGGAGAACGAAGGCATGTTGCCGCTCGACATTGATCCCAAGCTCGCCTGGGCGCTG
CGCCACCGCGACCGCTTCCCGCTCGACATCAACAAAGCCAGCCGCGAGGAGCTGCTGCGCGTGCCCGGCTTCGGCACCCG
CACCGTGCAGCGCATCCTGGCCACGCGCCGCACCACGACGATCCGCTTTGCGGATCTGGCCCAGCTCAACGTGATCCGGA
ACAAGGCGCTGCCGTTCATCGTTTTGTCAGATCACCGGCCGTCGCCGTCTTTGCTGGACGGCGCCAGCCTCAGGGCCCGG
CTGCAGCCCAAGCCGCAGCAGCTGGGGTTTGGATTCTAG

Upstream 100 bases:

>100_bases
GTTCATGATACGTTCTAATATAAAGCTAACGCGTCCGAGAGAGTCAATCGGGATTGACCCGGTGCGGATTCAACGAGTGG
AATCAAAGGGATTCAAAAGC

Downstream 100 bases:

>100_bases
CCAAGTCGTCATTGCGAGGGGCGAAGCCCCGAAGCAATCCAGGGGCGACACGACGACTCTGGATTGCTTCGTCGCTGCGC
TCCTCGCAATGACGTGAGGA

Product: putative elongator protein 3/MiaB/NifB

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MELLRKLEILADAAKYDASCASSGTEMRDSRDGKGLGSTAPGMGICHSYAPDGRCISLLKILLTNACNFDCLYCVNRASS
NVPRARFTVDEVVQLTIDFYRRNYIEGLFLSSGIIRSPDYTMEQVVSVARKLREEHRFRGYIHLKTIPEADEALIAEAGK
YADRLSINIETPLEDSLTKLAPEKDQRAIRRTMGRLRLKLDETAEAKKTVRRARPPRFAPAGQSTQMIVGADTANDRTIL
STSANLYGAYKLKRVYYSAFSPIPDASRALPLQAPPLVREHRLYQADWLMRFYGFDAEEIVEENEGMLPLDIDPKLAWAL
RHRDRFPLDINKASREELLRVPGFGTRTVQRILATRRTTTIRFADLAQLNVIRNKALPFIVLSDHRPSPSLLDGASLRAR
LQPKPQQLGFGF

Sequences:

>Translated_412_residues
MELLRKLEILADAAKYDASCASSGTEMRDSRDGKGLGSTAPGMGICHSYAPDGRCISLLKILLTNACNFDCLYCVNRASS
NVPRARFTVDEVVQLTIDFYRRNYIEGLFLSSGIIRSPDYTMEQVVSVARKLREEHRFRGYIHLKTIPEADEALIAEAGK
YADRLSINIETPLEDSLTKLAPEKDQRAIRRTMGRLRLKLDETAEAKKTVRRARPPRFAPAGQSTQMIVGADTANDRTIL
STSANLYGAYKLKRVYYSAFSPIPDASRALPLQAPPLVREHRLYQADWLMRFYGFDAEEIVEENEGMLPLDIDPKLAWAL
RHRDRFPLDINKASREELLRVPGFGTRTVQRILATRRTTTIRFADLAQLNVIRNKALPFIVLSDHRPSPSLLDGASLRAR
LQPKPQQLGFGF
>Mature_412_residues
MELLRKLEILADAAKYDASCASSGTEMRDSRDGKGLGSTAPGMGICHSYAPDGRCISLLKILLTNACNFDCLYCVNRASS
NVPRARFTVDEVVQLTIDFYRRNYIEGLFLSSGIIRSPDYTMEQVVSVARKLREEHRFRGYIHLKTIPEADEALIAEAGK
YADRLSINIETPLEDSLTKLAPEKDQRAIRRTMGRLRLKLDETAEAKKTVRRARPPRFAPAGQSTQMIVGADTANDRTIL
STSANLYGAYKLKRVYYSAFSPIPDASRALPLQAPPLVREHRLYQADWLMRFYGFDAEEIVEENEGMLPLDIDPKLAWAL
RHRDRFPLDINKASREELLRVPGFGTRTVQRILATRRTTTIRFADLAQLNVIRNKALPFIVLSDHRPSPSLLDGASLRAR
LQPKPQQLGFGF

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46444; Mature: 46444

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS01305 MOAA_NIFB_PQQE ; PS00260 GLUCAGON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLRKLEILADAAKYDASCASSGTEMRDSRDGKGLGSTAPGMGICHSYAPDGRCISLLK
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH
ILLTNACNFDCLYCVNRASSNVPRARFTVDEVVQLTIDFYRRNYIEGLFLSSGIIRSPDY
HHHHCCCCCHHHEEEHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TMEQVVSVARKLREEHRFRGYIHLKTIPEADEALIAEAGKYADRLSINIETPLEDSLTKL
CHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCHHEEEEEECCCHHHHHHHH
APEKDQRAIRRTMGRLRLKLDETAEAKKTVRRARPPRFAPAGQSTQMIVGADTANDRTIL
CCCHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEE
STSANLYGAYKLKRVYYSAFSPIPDASRALPLQAPPLVREHRLYQADWLMRFYGFDAEEI
EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
VEENEGMLPLDIDPKLAWALRHRDRFPLDINKASREELLRVPGFGTRTVQRILATRRTTT
HHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHCHHHHHHCCCCCHHHHHHHHHHHCCCE
IRFADLAQLNVIRNKALPFIVLSDHRPSPSLLDGASLRARLQPKPQQLGFGF
EEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHEECCCCHHHCCCCC
>Mature Secondary Structure
MELLRKLEILADAAKYDASCASSGTEMRDSRDGKGLGSTAPGMGICHSYAPDGRCISLLK
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH
ILLTNACNFDCLYCVNRASSNVPRARFTVDEVVQLTIDFYRRNYIEGLFLSSGIIRSPDY
HHHHCCCCCHHHEEEHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TMEQVVSVARKLREEHRFRGYIHLKTIPEADEALIAEAGKYADRLSINIETPLEDSLTKL
CHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCHHEEEEEECCCHHHHHHHH
APEKDQRAIRRTMGRLRLKLDETAEAKKTVRRARPPRFAPAGQSTQMIVGADTANDRTIL
CCCHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEE
STSANLYGAYKLKRVYYSAFSPIPDASRALPLQAPPLVREHRLYQADWLMRFYGFDAEEI
EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
VEENEGMLPLDIDPKLAWALRHRDRFPLDINKASREELLRVPGFGTRTVQRILATRRTTT
HHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHCHHHHHHCCCCCHHHHHHHHHHHCCCE
IRFADLAQLNVIRNKALPFIVLSDHRPSPSLLDGASLRARLQPKPQQLGFGF
EEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHEECCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA