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The map label for this gene is 146339650

Identifier: 146339650

GI number: 146339650

Start: 2838718

End: 2840199

Strand: Reverse

Name: 146339650

Synonym: BRADO2643

Alternate gene names: NA

Gene position: 2840199-2838718 (Counterclockwise)

Preceding gene: 146339651

Following gene: 146339648

Centisome position: 38.09

GC content: 67.21

Gene sequence:

>1482_bases
ATGCACGTCGTAACCCTCGATAGCGACACCGATTTCGACGGCTGGCGCAAGGCGGCGCGGGCGCTGGCGATGAACGACGT
CAGGGCCGCTGATGTGTCCTGGCGCGTGAAGGGCGCGGCGGCCGACCTGTTCGACGATCAGTCGGAGATACGGCTGCCCG
AGGTCCCCAGGGGCGCGTTCTCCGTGCCCGCGAGCTTCATGGAACTGGCCGAGAGCGCGATCCTGCACAGCGATCCCAAC
CGCTTCGCCCTGCTCTACCGGCTGCTGTGGCGCCTGCGCACCAACCACGACCTCATGGACATCGCGACCGATCCCGATGT
CGCCCAGGCCAACGCGCTCGCCCGCGCCGTGCGCCGCGACGTCCACAAGATGCACGCCTTCGTCCGCTTCCGCGAGGTCG
GCCGCGAGCGCGAGGCGCGCTACGTCGCCTGGTTCGAGCCCGAGCATCACATCGTCGAACGCGCCGCGCCGTTCTTCGCC
CGCCGCTTCGCCGACATGCCCTGGTCGATCCTGACGCCGGAGATCTGCGCCCATTGGGACGGCAGCCGGGTCTCCTTCAC
CTCCGGTGTGAGCAAGGCTGAAGCGCCGACAGAAGACCGGCTCGAAGAGGTGTGGCTTCGCTATTACGCCAGCATTTTCA
ATCCGGCACGGCTGAAAGTGAAGGCGATGGAAAAGGAGATGCCGAAGAAATATTGGCAGAACCTCCCCGAGGCCAGGCTG
ATCCGGCCGCTGATCGCGGAAGCCAGCCGGCGCACATCGGTGATGATCGCCGATGAAGGCACCGAGCCGCACAAGCCGCA
GAAACGCGTCGAGGAGACCGCGATGACCCGCAAGCCGAAAGCGCACGCGCCTGCTGCTGAGACCTCACGTGATGTCGAGG
CTGTCGATCTTCAGACCTTGCGTGAAGAGGCTGCGGCCTGCCGCGCCTGCCCGCTGTGGAAGGACGCGACCCAGACCGTG
TTCGGCGAGGGCCCTGAACATGCGCCCTTGATGCTGGTCGGCGAGCAGCCCGGCGACAAGGAGGACCTTGCCGGCCATCC
CTTCGTCGGCCCGGCCGGCCAGATGCTCGACCGCGCGCTGGCAGAGGCCGGCATAGACCGCTCCAAGGTCTACGTCACCA
ATGCGGTGAAGCACTTCAAGTTCGTGCCGCGCGGCAAGATCCGGCTGCACCAGAAGCCGGCGACCCCGGAGATCAAGGCC
TGCCGTCCCTGGTACGAGCGCGAGCTCGCCGCAGTCCAGCCGGCTCTGGTCGTGGCAATGGGCGCGAGCGCAGCCCAGGC
GGTGTTCGGCAAGATCACCCAGGTCACCAAGAACCGCGGCCACATCGTCGACCTGCCCGAAGGGGCCCAGGCAATGATCA
CGGTGCATCCGTCCTATCTGCTGCGGCTGCCCGATGCGGAGGCCAAGGCGCGGGAGTACGAGCTCTTCGTCAAGGACCTG
AAGATCGCCGCGGCCGCCCTCAAGCGCGCCCAGGCGGCCTGA

Upstream 100 bases:

>100_bases
TCGTCATTGCGAGGGGCGAAGCCCCGAAGCAATCCAGGGGCGACACGACGACTCTGGATTGCTTCGTCGCTGCGCTCCTC
GCAATGACGTGAGGAGACAA

Downstream 100 bases:

>100_bases
CGCTGCCCGAACCGCAAATGGCCGGGCCTTCGCCGCCCGAAAGGGCTTCGGCCCCGCAGGCGGGACAGAGCCCGGCCATC
GCTTGAAGACAGCGGAGCGA

Product: putative Uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; DNA-Directed DNA Polymerase; Uracil-DNA Glycosylase Family 4 Protein; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage SpO1 DNA Polymerase-Related Protein; Uracil DNA Glycosylase Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MHVVTLDSDTDFDGWRKAARALAMNDVRAADVSWRVKGAAADLFDDQSEIRLPEVPRGAFSVPASFMELAESAILHSDPN
RFALLYRLLWRLRTNHDLMDIATDPDVAQANALARAVRRDVHKMHAFVRFREVGREREARYVAWFEPEHHIVERAAPFFA
RRFADMPWSILTPEICAHWDGSRVSFTSGVSKAEAPTEDRLEEVWLRYYASIFNPARLKVKAMEKEMPKKYWQNLPEARL
IRPLIAEASRRTSVMIADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDVEAVDLQTLREEAAACRACPLWKDATQTV
FGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKA
CRPWYERELAAVQPALVVAMGASAAQAVFGKITQVTKNRGHIVDLPEGAQAMITVHPSYLLRLPDAEAKAREYELFVKDL
KIAAAALKRAQAA

Sequences:

>Translated_493_residues
MHVVTLDSDTDFDGWRKAARALAMNDVRAADVSWRVKGAAADLFDDQSEIRLPEVPRGAFSVPASFMELAESAILHSDPN
RFALLYRLLWRLRTNHDLMDIATDPDVAQANALARAVRRDVHKMHAFVRFREVGREREARYVAWFEPEHHIVERAAPFFA
RRFADMPWSILTPEICAHWDGSRVSFTSGVSKAEAPTEDRLEEVWLRYYASIFNPARLKVKAMEKEMPKKYWQNLPEARL
IRPLIAEASRRTSVMIADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDVEAVDLQTLREEAAACRACPLWKDATQTV
FGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKA
CRPWYERELAAVQPALVVAMGASAAQAVFGKITQVTKNRGHIVDLPEGAQAMITVHPSYLLRLPDAEAKAREYELFVKDL
KIAAAALKRAQAA
>Mature_493_residues
MHVVTLDSDTDFDGWRKAARALAMNDVRAADVSWRVKGAAADLFDDQSEIRLPEVPRGAFSVPASFMELAESAILHSDPN
RFALLYRLLWRLRTNHDLMDIATDPDVAQANALARAVRRDVHKMHAFVRFREVGREREARYVAWFEPEHHIVERAAPFFA
RRFADMPWSILTPEICAHWDGSRVSFTSGVSKAEAPTEDRLEEVWLRYYASIFNPARLKVKAMEKEMPKKYWQNLPEARL
IRPLIAEASRRTSVMIADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDVEAVDLQTLREEAAACRACPLWKDATQTV
FGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKA
CRPWYERELAAVQPALVVAMGASAAQAVFGKITQVTKNRGHIVDLPEGAQAMITVHPSYLLRLPDAEAKAREYELFVKDL
KIAAAALKRAQAA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 55292; Mature: 55292

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVVTLDSDTDFDGWRKAARALAMNDVRAADVSWRVKGAAADLFDDQSEIRLPEVPRGAF
CEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCH
SVPASFMELAESAILHSDPNRFALLYRLLWRLRTNHDLMDIATDPDVAQANALARAVRRD
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
VHKMHAFVRFREVGREREARYVAWFEPEHHIVERAAPFFARRFADMPWSILTPEICAHWD
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCC
GSRVSFTSGVSKAEAPTEDRLEEVWLRYYASIFNPARLKVKAMEKEMPKKYWQNLPEARL
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
IRPLIAEASRRTSVMIADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDVEAVDLQTL
HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
REEAAACRACPLWKDATQTVFGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRAL
HHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
AEAGIDRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKACRPWYERELAAVQPALVVAM
HHHCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHCHHHHEEE
GASAAQAVFGKITQVTKNRGHIVDLPEGAQAMITVHPSYLLRLPDAEAKAREYELFVKDL
CCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECHHHEEECCCCHHHHHHHHHHHHHH
KIAAAALKRAQAA
HHHHHHHHHHCCC
>Mature Secondary Structure
MHVVTLDSDTDFDGWRKAARALAMNDVRAADVSWRVKGAAADLFDDQSEIRLPEVPRGAF
CEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCH
SVPASFMELAESAILHSDPNRFALLYRLLWRLRTNHDLMDIATDPDVAQANALARAVRRD
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
VHKMHAFVRFREVGREREARYVAWFEPEHHIVERAAPFFARRFADMPWSILTPEICAHWD
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCC
GSRVSFTSGVSKAEAPTEDRLEEVWLRYYASIFNPARLKVKAMEKEMPKKYWQNLPEARL
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
IRPLIAEASRRTSVMIADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDVEAVDLQTL
HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
REEAAACRACPLWKDATQTVFGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRAL
HHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
AEAGIDRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKACRPWYERELAAVQPALVVAM
HHHCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHCHHHHEEE
GASAAQAVFGKITQVTKNRGHIVDLPEGAQAMITVHPSYLLRLPDAEAKAREYELFVKDL
CCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECHHHEEECCCCHHHHHHHHHHHHHH
KIAAAALKRAQAA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA