| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ilvB [H]
Identifier: 146339599
GI number: 146339599
Start: 2775008
End: 2776636
Strand: Reverse
Name: ilvB [H]
Synonym: BRADO2591
Alternate gene names: 146339599
Gene position: 2776636-2775008 (Counterclockwise)
Preceding gene: 146339600
Following gene: 146339596
Centisome position: 37.24
GC content: 68.14
Gene sequence:
>1629_bases ATGACCACCATGACCGGCGGCGAAGCCATCGTCAGCGGGCTCGTCGCCCACGGCGTCGACACCGTGTTCGGCCTGCCCGG CGCGCAGGTCTACGGCCTGTTCGACGCCTTCCACCAGGCGCAACTGAAGGTCGTCGGCGCGCGCCATGAGCAGGCCTGCG GCTACATGGCGTTCGGCTACGCCCGCGCCAGCGGCAGGCCCGGCGTGTTCAGCGTCGTCCCAGGCCCCGGCGTGCTCAAT GCCGGCGCGGCGCTGCTCACCGCTTTCGGCTGCAACGAGCCGGTGCTGTGCCTGACCGGCCAGGTGCCGACGGACTATCT CGGCCGCGGCCGCGGCCATCTGCACGAGATGCCCGACCAGCTCGCCACTTTACGCACCTTCGTCAAATGGGCCGAGCGCA TCGAATATCCCGACAGCGCGCCGACACTGGTCGCGCGCGCGTTCCAGGAGATGCTGTCCGGACGGCGCGGGCCCGCCGCG CTGGAGATGCCGTGGGACGTGTTCACGCAGAAGGCCGCGACATCGGCCGCAAATCCGCTGGCTCAGGTCACGCCACCGCA GCCCGATCCCGACCGCATCGCCAAGGCCACCGCCCTCATCGCGAGCGCCAAGGCACCGATGATCTTCGTCGGCTCCGGCG CGATCGAGGCGCGCGAGGAGATCCTCGAACTGGCCGAGATGATCGACGCGCCGGTCGTCGCCTTCCGCTCGGGGCGCGGC ATCGTCTCCAACGCGCATGAGCTCGGGCTCACCATGGCCGCGGCCTACAAGCTCTGGCCAACCACCGATCTGATGATCGG CATCGGCACCCGCATGGAACTGCCGACGACGTTCCGCTGGCCGTTCAAGCCTGACGGCTTGAAGTCGATCCGCATCGACA TCGACCCAGCCGAGATGCGTCGCCTGATCGTCGACGCCGGCCTCGTCGCCGATGCCAAGGCGGGCACGGCTGCGCTGGCC GCGGCTGTGAGCAAGGCGGGCACTCGCAAGACCTCCGGCCGTCGCGCAGCAATCCGCAAGGCCAGCGCTGCGACCTTGCA GGAGATCCAGAAGGTGCAGCCGCAGATGGCCTACCTCAACGTGCTGCGCGAGGTTTTGCCGCATGACGCCATCGTCACCG ACGAATTGTCCCAGGTCGGATTCGCCTCCTGGTACGGCTTCCCGGTCTACCAGCCGCGCACCTTCATCACGTCAGGCTAT CAGGGCACGCTGGGCGCCGGCTTTCCGACCGCCCTCGGCGCCAAGGTCGCGCATCCCGACAAGCCGGTGGTCGCGATCAC CGGCGATGGCGGATTCATGTTCGCGGTGCAGGAGCTGGCGACCGCCGTGCAATACAACATCGGCGTCGTGACCCTGGTGT TCAACAACAACTCCTACGGCAATGTCCGGCGCGACCAGCGCGAACGCTTCGACGGCCGCGTCGTCGCCTCCGACCTGGTC AATCCGGATTTCGTCAAGCTCGCGGAGTCGTTCGGTGTTGCGGCAAGCCGCGTCACCGCCCCTGACCAGTTCAAGGCGGC GCTCGAGACCGCACTCGCGCATGGCGGGCCGTATCTGATCGACATCGAGGTGCCGCGCGACAGCGAAGTCTCGCCCTGGG CCTTCATTCATCCGGCCAAGCCGGCCTGA
Upstream 100 bases:
>100_bases TATCTCAAGCCCGGCGATGTCATCGAGATCGCCGCCGAGGGCATCGGCACCTTGCGCAACGGCGTCGTCGACGAAGCAGA ATAGAAACGGACATATCAGC
Downstream 100 bases:
>100_bases TCAACCCGCGCGGCGAAAGGTCAGGTTGATACGCCGGCGGCCAAGCCGCGCATGCTCGCCGTCGGCGAGCGGCGCGACGC CGTGAAACGCGAGCCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKVVGARHEQACGYMAFGYARASGRPGVFSVVPGPGVLN AGAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQLATLRTFVKWAERIEYPDSAPTLVARAFQEMLSGRRGPAA LEMPWDVFTQKAATSAANPLAQVTPPQPDPDRIAKATALIASAKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG IVSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPAEMRRLIVDAGLVADAKAGTAALA AAVSKAGTRKTSGRRAAIRKASAATLQEIQKVQPQMAYLNVLREVLPHDAIVTDELSQVGFASWYGFPVYQPRTFITSGY QGTLGAGFPTALGAKVAHPDKPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLV NPDFVKLAESFGVAASRVTAPDQFKAALETALAHGGPYLIDIEVPRDSEVSPWAFIHPAKPA
Sequences:
>Translated_542_residues MTTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKVVGARHEQACGYMAFGYARASGRPGVFSVVPGPGVLN AGAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQLATLRTFVKWAERIEYPDSAPTLVARAFQEMLSGRRGPAA LEMPWDVFTQKAATSAANPLAQVTPPQPDPDRIAKATALIASAKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG IVSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPAEMRRLIVDAGLVADAKAGTAALA AAVSKAGTRKTSGRRAAIRKASAATLQEIQKVQPQMAYLNVLREVLPHDAIVTDELSQVGFASWYGFPVYQPRTFITSGY QGTLGAGFPTALGAKVAHPDKPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLV NPDFVKLAESFGVAASRVTAPDQFKAALETALAHGGPYLIDIEVPRDSEVSPWAFIHPAKPA >Mature_541_residues TTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKVVGARHEQACGYMAFGYARASGRPGVFSVVPGPGVLNA GAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQLATLRTFVKWAERIEYPDSAPTLVARAFQEMLSGRRGPAAL EMPWDVFTQKAATSAANPLAQVTPPQPDPDRIAKATALIASAKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRGI VSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPAEMRRLIVDAGLVADAKAGTAALAA AVSKAGTRKTSGRRAAIRKASAATLQEIQKVQPQMAYLNVLREVLPHDAIVTDELSQVGFASWYGFPVYQPRTFITSGYQ GTLGAGFPTALGAKVAHPDKPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLVN PDFVKLAESFGVAASRVTAPDQFKAALETALAHGGPYLIDIEVPRDSEVSPWAFIHPAKPA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=551, Percent_Identity=25.2268602540835, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI21361361, Length=582, Percent_Identity=26.9759450171821, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI87081685, Length=571, Percent_Identity=29.7723292469352, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI1790104, Length=539, Percent_Identity=28.3858998144712, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1786717, Length=576, Percent_Identity=30.9027777777778, Blast_Score=192, Evalue=6e-50, Organism=Escherichia coli, GI1787096, Length=541, Percent_Identity=25.8780036968577, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1788716, Length=542, Percent_Identity=26.1992619926199, Blast_Score=138, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17542570, Length=563, Percent_Identity=28.2415630550622, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17531299, Length=562, Percent_Identity=26.6903914590747, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17531301, Length=562, Percent_Identity=26.6903914590747, Blast_Score=134, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323755, Length=567, Percent_Identity=30.6878306878307, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6320816, Length=489, Percent_Identity=26.1758691206544, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI19922626, Length=564, Percent_Identity=27.3049645390071, Blast_Score=164, Evalue=2e-40,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 57739; Mature: 57608
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKVVGARHEQACGYMAFGY CCCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHEEEECCCHHHHCCEEEEEE ARASGRPGVFSVVPGPGVLNAGAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQ EECCCCCCEEEECCCCCCHHCCHHHHHHHCCCCCEEEEECCCCHHHHHCCCCHHHHHHHH LATLRTFVKWAERIEYPDSAPTLVARAFQEMLSGRRGPAALEMPWDVFTQKAATSAANPL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCC AQVTPPQPDPDRIAKATALIASAKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCC IVSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPAEMR CCCCHHHHHHHHHHHEEECCCCCEEEECCCCEECCCEEECCCCCCCCCEEEEECCHHHHH RLIVDAGLVADAKAGTAALAAAVSKAGTRKTSGRRAAIRKASAATLQEIQKVQPQMAYLN HHHHHCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH VLREVLPHDAIVTDELSQVGFASWYGFPVYQPRTFITSGYQGTLGAGFPTALGAKVAHPD HHHHHCCCCCEEHHHHHHCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCC KPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLV CCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHCCCEEEHHHCC NPDFVKLAESFGVAASRVTAPDQFKAALETALAHGGPYLIDIEVPRDSEVSPWAFIHPAK CHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCC PA CC >Mature Secondary Structure TTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKVVGARHEQACGYMAFGY CCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHEEEECCCHHHHCCEEEEEE ARASGRPGVFSVVPGPGVLNAGAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQ EECCCCCCEEEECCCCCCHHCCHHHHHHHCCCCCEEEEECCCCHHHHHCCCCHHHHHHHH LATLRTFVKWAERIEYPDSAPTLVARAFQEMLSGRRGPAALEMPWDVFTQKAATSAANPL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCC AQVTPPQPDPDRIAKATALIASAKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCC IVSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPAEMR CCCCHHHHHHHHHHHEEECCCCCEEEECCCCEECCCEEECCCCCCCCCEEEEECCHHHHH RLIVDAGLVADAKAGTAALAAAVSKAGTRKTSGRRAAIRKASAATLQEIQKVQPQMAYLN HHHHHCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH VLREVLPHDAIVTDELSQVGFASWYGFPVYQPRTFITSGYQGTLGAGFPTALGAKVAHPD HHHHHCCCCCEEHHHHHHCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCC KPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLV CCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHCCCEEEHHHCC NPDFVKLAESFGVAASRVTAPDQFKAALETALAHGGPYLIDIEVPRDSEVSPWAFIHPAK CHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]