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The map label for this gene is amaB [H]

Identifier: 146339545

GI number: 146339545

Start: 2710141

End: 2711391

Strand: Reverse

Name: amaB [H]

Synonym: BRADO2536

Alternate gene names: 146339545

Gene position: 2711391-2710141 (Counterclockwise)

Preceding gene: 146339546

Following gene: 146339544

Centisome position: 36.36

GC content: 68.19

Gene sequence:

>1251_bases
ATGAGCCGCGCCGCCACCAATCTGCAGATCGATTCCGCCCGCCTCTGGGACAGCATCCACGAGACCGCCAAATTCGGCGC
CACGCCGAAGGGCGGCGTGCGCCGGCTGACCTTGAGCCAGGAGGACAAGCAGGTCCGCGACTGGTTCCGGAAAGCCTGCG
AGGACGCAGGCCTGGAGGTTCACGTCGACACGCTCGGCTCGATGTTCGCCTTGCGCAAGGGCCGGGACATGTCGAAGCCG
CCGGTCGGGCTCGGCTCGCATCTCGACACCCAGCCGACCGGCGGCAAGTTCGACGGCATCCTCGGCACGCTCGGCGCGCT
CGAAGTGATCCGCACACTCAACGACGCCGGCATCGAGACCGACGCGCCGCTGTGCATCGTCAACTGGACCAATGAGGAAG
GTTCGCGCTTCGCGCCGGCGATGATGGCGTCGGCCGCCTATGTCGGCGACTTCACCGTCGAGGACATCTTGTCGCGCAAG
GACGCGGAAGGCGTGACGGTCGGCGAGGCGCTGGACGGCATCGGCTATCGCGGCGCAACGGCCGTCGGCACGCAGAAGTT
CTCGGGCTTCGTCGAACTGCACATCGAGCAGGGCCCGATCCTGGAGGCCGAGAACAAGACCATCGGCGTGGTCGATCACG
GCCAGGGCGTGTTCTGGTACGACGGCAAGGTGACGGGCTTCGAGAGCCATGCCGGCTCGACACCGATGCCGCTGCGCCGC
GACGCGCTGCTGGCGCTGTCGGAGTTCGCGCTGACCCTGGAGCAGATCGCGATCAGGCTCGGGCCCAACGCGGTCGCCAC
CATCGGCGAGGCCGTCATCGCCAATCCCTCGCGCAACGTCATCCCTGGCGAGATCGCCTTCACCATCGACTGCCGCAGCG
CCAATGCCGACACCCTGGAGGCGCTCGACGCCAGTCTGCGCGCGGCCGCGAGCGAGATTTCCAAGAAGCGCCGCGTCGAG
ATCGCGATCGACCAGGTATGGCGCAAGCCGCCGACGCATTTCGATCCCAGGCTGGTCGACGCCGTGGAGCGCGCCGCAGG
CTCCCTCGGCTATTCCCACCGCCGCATCACCTCCGGCGCCGGCCACGACGCCTGCAACCTCAACACCATCATGCCCGCGG
CGATGGTGTTCGTCCCCTGCAAGGACGGCATCAGCCACAACGAGCTGGAGGACGCGACCCAGTCCGACTGCGCGGCGGGC
GCCAATGTGCTGCTGCACACCGTGCTGTCGCTGGCGGGCGTGGCGTCGTGA

Upstream 100 bases:

>100_bases
CCGCCCGGACGGCGCAGACGGCCAGCCATCCCGCCACATCGGTTGACGCCGCCGTCGCGGCGCGCGATGGACAGGATGCC
GGAGTACAAGGACTAACAGC

Downstream 100 bases:

>100_bases
CGGGCTGATGCTTGCGGACGCATCGGGACCTCATCCTTCGAGACGCCGCTGCGCGGCTCCTCAGGATGAGGGGAGAGGCT
GCGGCGAGCTTGTTTTTCAT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSRAATNLQIDSARLWDSIHETAKFGATPKGGVRRLTLSQEDKQVRDWFRKACEDAGLEVHVDTLGSMFALRKGRDMSKP
PVGLGSHLDTQPTGGKFDGILGTLGALEVIRTLNDAGIETDAPLCIVNWTNEEGSRFAPAMMASAAYVGDFTVEDILSRK
DAEGVTVGEALDGIGYRGATAVGTQKFSGFVELHIEQGPILEAENKTIGVVDHGQGVFWYDGKVTGFESHAGSTPMPLRR
DALLALSEFALTLEQIAIRLGPNAVATIGEAVIANPSRNVIPGEIAFTIDCRSANADTLEALDASLRAAASEISKKRRVE
IAIDQVWRKPPTHFDPRLVDAVERAAGSLGYSHRRITSGAGHDACNLNTIMPAAMVFVPCKDGISHNELEDATQSDCAAG
ANVLLHTVLSLAGVAS

Sequences:

>Translated_416_residues
MSRAATNLQIDSARLWDSIHETAKFGATPKGGVRRLTLSQEDKQVRDWFRKACEDAGLEVHVDTLGSMFALRKGRDMSKP
PVGLGSHLDTQPTGGKFDGILGTLGALEVIRTLNDAGIETDAPLCIVNWTNEEGSRFAPAMMASAAYVGDFTVEDILSRK
DAEGVTVGEALDGIGYRGATAVGTQKFSGFVELHIEQGPILEAENKTIGVVDHGQGVFWYDGKVTGFESHAGSTPMPLRR
DALLALSEFALTLEQIAIRLGPNAVATIGEAVIANPSRNVIPGEIAFTIDCRSANADTLEALDASLRAAASEISKKRRVE
IAIDQVWRKPPTHFDPRLVDAVERAAGSLGYSHRRITSGAGHDACNLNTIMPAAMVFVPCKDGISHNELEDATQSDCAAG
ANVLLHTVLSLAGVAS
>Mature_415_residues
SRAATNLQIDSARLWDSIHETAKFGATPKGGVRRLTLSQEDKQVRDWFRKACEDAGLEVHVDTLGSMFALRKGRDMSKPP
VGLGSHLDTQPTGGKFDGILGTLGALEVIRTLNDAGIETDAPLCIVNWTNEEGSRFAPAMMASAAYVGDFTVEDILSRKD
AEGVTVGEALDGIGYRGATAVGTQKFSGFVELHIEQGPILEAENKTIGVVDHGQGVFWYDGKVTGFESHAGSTPMPLRRD
ALLALSEFALTLEQIAIRLGPNAVATIGEAVIANPSRNVIPGEIAFTIDCRSANADTLEALDASLRAAASEISKKRRVEI
AIDQVWRKPPTHFDPRLVDAVERAAGSLGYSHRRITSGAGHDACNLNTIMPAAMVFVPCKDGISHNELEDATQSDCAAGA
NVLLHTVLSLAGVAS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=395, Percent_Identity=33.6708860759494, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44298; Mature: 44167

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAATNLQIDSARLWDSIHETAKFGATPKGGVRRLTLSQEDKQVRDWFRKACEDAGLEV
CCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEE
HVDTLGSMFALRKGRDMSKPPVGLGSHLDTQPTGGKFDGILGTLGALEVIRTLNDAGIET
EHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DAPLCIVNWTNEEGSRFAPAMMASAAYVGDFTVEDILSRKDAEGVTVGEALDGIGYRGAT
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCC
AVGTQKFSGFVELHIEQGPILEAENKTIGVVDHGQGVFWYDGKVTGFESHAGSTPMPLRR
HHCHHHCCCEEEEEECCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCCCCCCCCHH
DALLALSEFALTLEQIAIRLGPNAVATIGEAVIANPSRNVIPGEIAFTIDCRSANADTLE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCHHHH
ALDASLRAAASEISKKRRVEIAIDQVWRKPPTHFDPRLVDAVERAAGSLGYSHRRITSGA
HHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHEECCCC
GHDACNLNTIMPAAMVFVPCKDGISHNELEDATQSDCAAGANVLLHTVLSLAGVAS
CCCCCCCHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRAATNLQIDSARLWDSIHETAKFGATPKGGVRRLTLSQEDKQVRDWFRKACEDAGLEV
CCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEE
HVDTLGSMFALRKGRDMSKPPVGLGSHLDTQPTGGKFDGILGTLGALEVIRTLNDAGIET
EHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DAPLCIVNWTNEEGSRFAPAMMASAAYVGDFTVEDILSRKDAEGVTVGEALDGIGYRGAT
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCC
AVGTQKFSGFVELHIEQGPILEAENKTIGVVDHGQGVFWYDGKVTGFESHAGSTPMPLRR
HHCHHHCCCEEEEEECCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCCCCCCCCHH
DALLALSEFALTLEQIAIRLGPNAVATIGEAVIANPSRNVIPGEIAFTIDCRSANADTLE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCHHHH
ALDASLRAAASEISKKRRVEIAIDQVWRKPPTHFDPRLVDAVERAAGSLGYSHRRITSGA
HHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHEECCCC
GHDACNLNTIMPAAMVFVPCKDGISHNELEDATQSDCAAGANVLLHTVLSLAGVAS
CCCCCCCHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]