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The map label for this gene is yliC [H]

Identifier: 146339514

GI number: 146339514

Start: 2676212

End: 2677153

Strand: Reverse

Name: yliC [H]

Synonym: BRADO2504

Alternate gene names: 146339514

Gene position: 2677153-2676212 (Counterclockwise)

Preceding gene: 146339515

Following gene: 146339513

Centisome position: 35.9

GC content: 65.29

Gene sequence:

>942_bases
ATGCTGACCTTCCTCGGCCGCCGCTTCGCGCAGATCATCCCGACGCTCGTCTTCGTCTCGATCTTGATCTTCTCGTTGCA
GCAGTTGCTCCCGGGTGACCCTGCCCTGGTCATGGCCGGCGAGGAGCGCGATCCCGCCGTCATCGAGCAGATCCGAAAAC
AATATCGGCTCGACCAACCGCTGCCCGTGCAATACGGCTACTGGATCAAGGGCGTGCTGTCGGGCGATTTCGGCGAGTCC
CTGCGCATCAAGATGCCGGTGCGCGATCTCATCCTGCAGAAGCTGCCGGTGACCCTGCAGCTCGCGTCGATGGCGATCGT
GATCGCGTTCCTAATCGGCATCCCCGCCGGCATCGTCTCCGCCGTGAAACGCGGCACGGGATGGGACTACGCCGCCAATC
TGTTCGCGCTGTGGGGCATCTCGACGCCGAACTTCTGGCTCGGCATCATGCTGATCTTCGTGTTCTCGATCCAGCTCGGC
TGGCTGCCCGCCTCCGGCTACGTCTCGCTGGCCGAGGACTGGCGCGCCAGCCTCGCGGCCACCGTCATGCCGGCCTTCGT
GCTCGGCAACGCCATCGCCGCGATCCTGATGCGCCACACCCGCAGCGCGATGCTGCAGGTGCTGAGCAGCGACTACATCC
GCACCGCGCGCGCCAAGGGCATCTCCGAGCGCCAGGTCATCCTGCGCCACGCGCTGCGCAATGCCTTGACGCCCGTCATC
ACGCTAGGCGCGCTTGAGCTCGGCACGCTCTTGTCCGGCGCCGTGCTGACCGAGCAGATCTTCTCCATCCCCGGCTTCGG
CAAGCTGATCGTCGACGCCGTGTTCAACCGCGACTACGCGGTCGTGCAGGGCGTCGTGCTGGTCACCGCCACCGTCTACA
TCCTGCTCAACCTGATCGCCGATCTCGCTTATGTGCTCGTCAACCCGCGCTTGAGGAGCTGA

Upstream 100 bases:

>100_bases
TTGACCACGCCTTCGTTTCCAAAGGCCGCAAAGACGTGGATGGCCGGGTCAAGCCCGGCCATGACGATCGGGAAACAAGC
TCGGCCACGAGCCTCCGAAG

Downstream 100 bases:

>100_bases
CATGGCCGAGACGACGCTGTCAGCATCAGGCATCCGCACCCTCGCCCCGCTCGAACGGCCGATGCAGCGCACCTGGCGCC
GCCTGGTCAGGCGTAGGGGC

Product: ABC transporter permease dipeptide transport protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLTFLGRRFAQIIPTLVFVSILIFSLQQLLPGDPALVMAGEERDPAVIEQIRKQYRLDQPLPVQYGYWIKGVLSGDFGES
LRIKMPVRDLILQKLPVTLQLASMAIVIAFLIGIPAGIVSAVKRGTGWDYAANLFALWGISTPNFWLGIMLIFVFSIQLG
WLPASGYVSLAEDWRASLAATVMPAFVLGNAIAAILMRHTRSAMLQVLSSDYIRTARAKGISERQVILRHALRNALTPVI
TLGALELGTLLSGAVLTEQIFSIPGFGKLIVDAVFNRDYAVVQGVVLVTATVYILLNLIADLAYVLVNPRLRS

Sequences:

>Translated_313_residues
MLTFLGRRFAQIIPTLVFVSILIFSLQQLLPGDPALVMAGEERDPAVIEQIRKQYRLDQPLPVQYGYWIKGVLSGDFGES
LRIKMPVRDLILQKLPVTLQLASMAIVIAFLIGIPAGIVSAVKRGTGWDYAANLFALWGISTPNFWLGIMLIFVFSIQLG
WLPASGYVSLAEDWRASLAATVMPAFVLGNAIAAILMRHTRSAMLQVLSSDYIRTARAKGISERQVILRHALRNALTPVI
TLGALELGTLLSGAVLTEQIFSIPGFGKLIVDAVFNRDYAVVQGVVLVTATVYILLNLIADLAYVLVNPRLRS
>Mature_313_residues
MLTFLGRRFAQIIPTLVFVSILIFSLQQLLPGDPALVMAGEERDPAVIEQIRKQYRLDQPLPVQYGYWIKGVLSGDFGES
LRIKMPVRDLILQKLPVTLQLASMAIVIAFLIGIPAGIVSAVKRGTGWDYAANLFALWGISTPNFWLGIMLIFVFSIQLG
WLPASGYVSLAEDWRASLAATVMPAFVLGNAIAAILMRHTRSAMLQVLSSDYIRTARAKGISERQVILRHALRNALTPVI
TLGALELGTLLSGAVLTEQIFSIPGFGKLIVDAVFNRDYAVVQGVVLVTATVYILLNLIADLAYVLVNPRLRS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=43.3234421364985, Blast_Score=264, Evalue=5e-72,
Organism=Escherichia coli, GI1787053, Length=312, Percent_Identity=44.2307692307692, Blast_Score=261, Evalue=4e-71,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=38.7301587301587, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI1787497, Length=315, Percent_Identity=35.8730158730159, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1787761, Length=317, Percent_Identity=39.7476340694006, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=30.4511278195489, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1788504, Length=290, Percent_Identity=32.4137931034483, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34317; Mature: 34317

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFLGRRFAQIIPTLVFVSILIFSLQQLLPGDPALVMAGEERDPAVIEQIRKQYRLDQP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
LPVQYGYWIKGVLSGDFGESLRIKMPVRDLILQKLPVTLQLASMAIVIAFLIGIPAGIVS
CCCCCCHHHHHEECCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH
AVKRGTGWDYAANLFALWGISTPNFWLGIMLIFVFSIQLGWLPASGYVSLAEDWRASLAA
HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TVMPAFVLGNAIAAILMRHTRSAMLQVLSSDYIRTARAKGISERQVILRHALRNALTPVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TLGALELGTLLSGAVLTEQIFSIPGFGKLIVDAVFNRDYAVVQGVVLVTATVYILLNLIA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DLAYVLVNPRLRS
HHHHHHHCCCCCC
>Mature Secondary Structure
MLTFLGRRFAQIIPTLVFVSILIFSLQQLLPGDPALVMAGEERDPAVIEQIRKQYRLDQP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
LPVQYGYWIKGVLSGDFGESLRIKMPVRDLILQKLPVTLQLASMAIVIAFLIGIPAGIVS
CCCCCCHHHHHEECCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH
AVKRGTGWDYAANLFALWGISTPNFWLGIMLIFVFSIQLGWLPASGYVSLAEDWRASLAA
HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TVMPAFVLGNAIAAILMRHTRSAMLQVLSSDYIRTARAKGISERQVILRHALRNALTPVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TLGALELGTLLSGAVLTEQIFSIPGFGKLIVDAVFNRDYAVVQGVVLVTATVYILLNLIA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DLAYVLVNPRLRS
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]