| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gsiB [H]
Identifier: 146339515
GI number: 146339515
Start: 2677305
End: 2678777
Strand: Reverse
Name: gsiB [H]
Synonym: BRADO2505
Alternate gene names: 146339515
Gene position: 2678777-2677305 (Counterclockwise)
Preceding gene: 146339516
Following gene: 146339514
Centisome position: 35.92
GC content: 64.63
Gene sequence:
>1473_bases ATGGCCTCTTGCGGGACAGCCGCCCAGGCGCAAACTACGCTGCGCATTGGGCTCGCCGAGGACGCCGACATTCTCGATCC GACGATGGCGCGGACCTATGTCGGCCGCATCGTGTTCGCCGCCGTCTGCGACAAGCTGTTCGACATCGACGAGAAGCTGA ACATCGTGCCGCAGCTCGCGCTGTCGCACGAGACCTCCGCCGACGGCAAGGAAGTCACGATCAGGCTGCGGCCCGGCGTC AAATTTCATGACGGCGAGCCGTTCGATGCCGAGGCGGCCAAGTTCTCGCTCGATCGTCACCTCTCGATGCCCGGCTCGTT CCGCAAGCCGGAGATCGCCTCGCTCGACCATGTCGATGTCGTCGATCCCCTGACGATCAAGCTGGTCTTGAAGACGCCGT TCTCGCCGCTGCTCGCCCAGCTCACCGACCGCGCCGGCATGATGGTGTCGCCGAAGGCCGCCAAAGAGGCCGGCGACAAG TTCGGCCTGCGCCCGGTCTGCGCCGGCCCCTACAAATTCGTCGAGCGCGTCCAGCAGGACCGCATCGTGTTCGAGAAGTT CGCCGACTACTGGAACAAGGACAACGTCTTCATCGACAAGATCGTCTATCAGCCGATCGTCGACGCCACGGTGCGGCTGG CGAACCTCAAGTCCGGCAGCCTCGACATGATCGAGCGGCTGCTCGCCACCGACATCAAGGACGTCACCAGCGACAAGCGC CTGAAGCTCTCGACCGCGACCAGCCTCGGCTATCGCGGTCTGACGCTCAATATCGGCAAGGACAAGACCAAGGGCCCGCT CAGCCAGTCGGCGAAGGTCCGCCAGGCCTTGGATCTGTCGATCGATCGCGAGGCGCTCAACCAGGTGGTCTTCAACGGCG AGTTCAAGCCTGGCAATCAATTCGTCAACCCCGAGAACCCCTACTACCAGTCCGCCTTCCCGGTGCGCGGCCGTGACGTC GAGAAGGCCAAGGCGCTCTTGAAGGAAGCCGGCGTGGCGCCGCCCGTCACCGTCGACTTCATGGTGCCGAAGGAGAGCGA GAGCGAAGCCGCCGCGCAGGTGCTGCAGGCCATGGCGGCGGAGGCCGGCTTCGACCTGAAGATCCGCATCACCGAGTTCG CGACCTCGCTCAAACAGGCCGAGGCCGGCGAGTACCAGGCCTACATGCTGGAATGGAGTGGCCGCAGCGATCCCGACGGC AACACCTACAACCACCTGCATTCCGGCGCGGCGCTCAACTACAGCGCCTGGAGCAACGCCGCCGCCGACAAGGCGCTGGA GGACGCGCGGCTCGTGAGCGACATCGCCAAGCGCAAGGCGATCTACGAGAGGCTGGTCAAGGAGCAGCAGGCCGACGAGC CGATCCTGTATCTCTATCACCGCAAGTTCCTGTTCGCGCAGACCACGAAGCTGGAAGGCTTCAAGCCCATGCCGGACGGC CTGCTGCGCGTGGTCGGGCTGAAGCTGAAGTGA
Upstream 100 bases:
>100_bases GGGGTTGGTACTGATAGTGCAACAATGCAGGCTGCATGTTCGTAGGGGATTTCGTATGCTGAGGAAGAACTGGTGCTTGG CCGCAATCGCGGCCGTCGTC
Downstream 100 bases:
>100_bases GGGCTGAGTTGTCAAGAGAAGCTATCACTCGGTTGTTCGTCATGCCCGGGCTTGACCACGCCTTCGTTTCCAAAGGCCGC AAAGACGTGGATGGCCGGGT
Product: putative ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MASCGTAAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLALSHETSADGKEVTIRLRPGV KFHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVDVVDPLTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDK FGLRPVCAGPYKFVERVQQDRIVFEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKR LKLSTATSLGYRGLTLNIGKDKTKGPLSQSAKVRQALDLSIDREALNQVVFNGEFKPGNQFVNPENPYYQSAFPVRGRDV EKAKALLKEAGVAPPVTVDFMVPKESESEAAAQVLQAMAAEAGFDLKIRITEFATSLKQAEAGEYQAYMLEWSGRSDPDG NTYNHLHSGAALNYSAWSNAAADKALEDARLVSDIAKRKAIYERLVKEQQADEPILYLYHRKFLFAQTTKLEGFKPMPDG LLRVVGLKLK
Sequences:
>Translated_490_residues MASCGTAAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLALSHETSADGKEVTIRLRPGV KFHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVDVVDPLTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDK FGLRPVCAGPYKFVERVQQDRIVFEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKR LKLSTATSLGYRGLTLNIGKDKTKGPLSQSAKVRQALDLSIDREALNQVVFNGEFKPGNQFVNPENPYYQSAFPVRGRDV EKAKALLKEAGVAPPVTVDFMVPKESESEAAAQVLQAMAAEAGFDLKIRITEFATSLKQAEAGEYQAYMLEWSGRSDPDG NTYNHLHSGAALNYSAWSNAAADKALEDARLVSDIAKRKAIYERLVKEQQADEPILYLYHRKFLFAQTTKLEGFKPMPDG LLRVVGLKLK >Mature_489_residues ASCGTAAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLALSHETSADGKEVTIRLRPGVK FHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVDVVDPLTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDKF GLRPVCAGPYKFVERVQQDRIVFEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKRL KLSTATSLGYRGLTLNIGKDKTKGPLSQSAKVRQALDLSIDREALNQVVFNGEFKPGNQFVNPENPYYQSAFPVRGRDVE KAKALLKEAGVAPPVTVDFMVPKESESEAAAQVLQAMAAEAGFDLKIRITEFATSLKQAEAGEYQAYMLEWSGRSDPDGN TYNHLHSGAALNYSAWSNAAADKALEDARLVSDIAKRKAIYERLVKEQQADEPILYLYHRKFLFAQTTKLEGFKPMPDGL LRVVGLKLK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=493, Percent_Identity=28.1947261663286, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1789966, Length=461, Percent_Identity=29.7180043383948, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1789887, Length=449, Percent_Identity=24.9443207126949, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787762, Length=501, Percent_Identity=24.9500998003992, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081878, Length=491, Percent_Identity=24.847250509165, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1787495, Length=527, Percent_Identity=22.9601518026565, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789397, Length=504, Percent_Identity=22.4206349206349, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1787551, Length=481, Percent_Identity=22.037422037422, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082063, Length=278, Percent_Identity=23.7410071942446, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 54146; Mature: 54014
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASCGTAAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLA CCCCCCCHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LSHETSADGKEVTIRLRPGVKFHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVDV HCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VDPLTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDKFGLRPVCAGPYKFVERVQQD CCCEEEEEEECCCCHHHHHHHHHCCCCEECCHHHHHCCHHCCCCCCCCCHHHHHHHHHHH RIVFEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKR HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCE LKLSTATSLGYRGLTLNIGKDKTKGPLSQSAKVRQALDLSIDREALNQVVFNGEFKPGNQ EEEEEHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC FVNPENPYYQSAFPVRGRDVEKAKALLKEAGVAPPVTVDFMVPKESESEAAAQVLQAMAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH EAGFDLKIRITEFATSLKQAEAGEYQAYMLEWSGRSDPDGNTYNHLHSGAALNYSAWSNA HCCCCEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCCEEECHHHCCH AADKALEDARLVSDIAKRKAIYERLVKEQQADEPILYLYHRKFLFAQTTKLEGFKPMPDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHEECCCCCCCCCCHHH LLRVVGLKLK HHHHHCCCCC >Mature Secondary Structure ASCGTAAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLA CCCCCCHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LSHETSADGKEVTIRLRPGVKFHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVDV HCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VDPLTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDKFGLRPVCAGPYKFVERVQQD CCCEEEEEEECCCCHHHHHHHHHCCCCEECCHHHHHCCHHCCCCCCCCCHHHHHHHHHHH RIVFEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKR HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCE LKLSTATSLGYRGLTLNIGKDKTKGPLSQSAKVRQALDLSIDREALNQVVFNGEFKPGNQ EEEEEHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC FVNPENPYYQSAFPVRGRDVEKAKALLKEAGVAPPVTVDFMVPKESESEAAAQVLQAMAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH EAGFDLKIRITEFATSLKQAEAGEYQAYMLEWSGRSDPDGNTYNHLHSGAALNYSAWSNA HCCCCEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCCEEECHHHCCH AADKALEDARLVSDIAKRKAIYERLVKEQQADEPILYLYHRKFLFAQTTKLEGFKPMPDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHEECCCCCCCCCCHHH LLRVVGLKLK HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA