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The map label for this gene is dppC [H]

Identifier: 146339513

GI number: 146339513

Start: 2675320

End: 2676150

Strand: Reverse

Name: dppC [H]

Synonym: BRADO2503

Alternate gene names: 146339513

Gene position: 2676150-2675320 (Counterclockwise)

Preceding gene: 146339514

Following gene: 146339509

Centisome position: 35.89

GC content: 69.55

Gene sequence:

>831_bases
ATGCAGCGCACCTGGCGCCGCCTGGTCAGGCGTAGGGGCGCGATGGTCGGGCTGGGCCTGATCACAATCTTCATCCTGCT
CGCCGTGTCAGCGCCGCTGGTGGCGCCGTACGATCCGATCAAGACGAGCTGGACGCTGGTGCGCAAGGCGCCTTCGGCGG
TGCATTGGTTCGGCACCGACGATCTCGGCCGCGACGTGCTGGCCCGCGTCATCTATGGCGCGCGCGCCTCGCTGCTGGCC
GGCGCGATCTCGGTCGTGATCGCGCTGTCGATCGGCGTTCCCATCGGCATGCTCGCGGGCTATCGCGGCGGCTTCATCGA
TGCCCTGATCAGCCGCATCACGGATGCGATGCTGGCCTGCCCGTTCCTGATCCTGGCGATTGCGCTGGCCGCGTTCCTGG
GGCCGAGCCTCGGCAACGCGATGATCGCGATTGGCATCTCGGCGACGCCCATCTTCGTCCGGCTCACGCGCGGCGAGGTG
CTGAGCGTCAAGGTCGAGGAGTATGTCGAGGCCGCGCGCAGCGTCGGCGACACCGACCTGCAGATCGCGGTCCGGCACAT
CCTGCCCAACATCATGCCGGCGCTGCTGGTGCAGGCGACCCTGTCGGTCGCCGCCGCCATCATCGCCGAGGCCGCGCTGT
CGTTCCTGGGGTTGGGCCAGCAGCCGCCGGCGCCGTCCTGGGGCAGCATGCTCAACGCCGCCCAGCGCTTCCTCACCAAC
GCGCCGTGGATGGCGATCTGGCCGGGGCTGGCGATCTTCCTGGTCGTGCTGTCGCTCAATCTGCTGGGCGACGGCCTGCG
CGACGCGCTGGACCCGCAGCAGGAGGAGTGA

Upstream 100 bases:

>100_bases
CTCGCTTATGTGCTCGTCAACCCGCGCTTGAGGAGCTGACATGGCCGAGACGACGCTGTCAGCATCAGGCATCCGCACCC
TCGCCCCGCTCGAACGGCCG

Downstream 100 bases:

>100_bases
GGCGTCCCGCGGACGACTTCCGCCGCCGCCCCACCCTCCGCCGTCGTCCCGGCCTCCGAGCCGGGACCCATAACCACAGG
AAGCAGTTCGAGGCAGGCGC

Product: ABC transporter permease dipeptide transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQRTWRRLVRRRGAMVGLGLITIFILLAVSAPLVAPYDPIKTSWTLVRKAPSAVHWFGTDDLGRDVLARVIYGARASLLA
GAISVVIALSIGVPIGMLAGYRGGFIDALISRITDAMLACPFLILAIALAAFLGPSLGNAMIAIGISATPIFVRLTRGEV
LSVKVEEYVEAARSVGDTDLQIAVRHILPNIMPALLVQATLSVAAAIIAEAALSFLGLGQQPPAPSWGSMLNAAQRFLTN
APWMAIWPGLAIFLVVLSLNLLGDGLRDALDPQQEE

Sequences:

>Translated_276_residues
MQRTWRRLVRRRGAMVGLGLITIFILLAVSAPLVAPYDPIKTSWTLVRKAPSAVHWFGTDDLGRDVLARVIYGARASLLA
GAISVVIALSIGVPIGMLAGYRGGFIDALISRITDAMLACPFLILAIALAAFLGPSLGNAMIAIGISATPIFVRLTRGEV
LSVKVEEYVEAARSVGDTDLQIAVRHILPNIMPALLVQATLSVAAAIIAEAALSFLGLGQQPPAPSWGSMLNAAQRFLTN
APWMAIWPGLAIFLVVLSLNLLGDGLRDALDPQQEE
>Mature_276_residues
MQRTWRRLVRRRGAMVGLGLITIFILLAVSAPLVAPYDPIKTSWTLVRKAPSAVHWFGTDDLGRDVLARVIYGARASLLA
GAISVVIALSIGVPIGMLAGYRGGFIDALISRITDAMLACPFLILAIALAAFLGPSLGNAMIAIGISATPIFVRLTRGEV
LSVKVEEYVEAARSVGDTDLQIAVRHILPNIMPALLVQATLSVAAAIIAEAALSFLGLGQQPPAPSWGSMLNAAQRFLTN
APWMAIWPGLAIFLVVLSLNLLGDGLRDALDPQQEE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=46.1538461538462, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=44.8818897637795, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=45.7446808510638, Blast_Score=201, Evalue=5e-53,
Organism=Escherichia coli, GI1787498, Length=275, Percent_Identity=35.6363636363636, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=37.8151260504202, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787549, Length=280, Percent_Identity=38.5714285714286, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788505, Length=224, Percent_Identity=33.4821428571429, Blast_Score=117, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29323; Mature: 29323

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTWRRLVRRRGAMVGLGLITIFILLAVSAPLVAPYDPIKTSWTLVRKAPSAVHWFGTD
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECCCC
DLGRDVLARVIYGARASLLAGAISVVIALSIGVPIGMLAGYRGGFIDALISRITDAMLAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
PFLILAIALAAFLGPSLGNAMIAIGISATPIFVRLTRGEVLSVKVEEYVEAARSVGDTDL
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEHHHHHHHHHHCCCHHH
QIAVRHILPNIMPALLVQATLSVAAAIIAEAALSFLGLGQQPPAPSWGSMLNAAQRFLTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
APWMAIWPGLAIFLVVLSLNLLGDGLRDALDPQQEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRTWRRLVRRRGAMVGLGLITIFILLAVSAPLVAPYDPIKTSWTLVRKAPSAVHWFGTD
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECCCC
DLGRDVLARVIYGARASLLAGAISVVIALSIGVPIGMLAGYRGGFIDALISRITDAMLAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
PFLILAIALAAFLGPSLGNAMIAIGISATPIFVRLTRGEVLSVKVEEYVEAARSVGDTDL
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEHHHHHHHHHHCCCHHH
QIAVRHILPNIMPALLVQATLSVAAAIIAEAALSFLGLGQQPPAPSWGSMLNAAQRFLTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
APWMAIWPGLAIFLVVLSLNLLGDGLRDALDPQQEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]