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The map label for this gene is 146339475

Identifier: 146339475

GI number: 146339475

Start: 2625081

End: 2625476

Strand: Reverse

Name: 146339475

Synonym: BRADO2463

Alternate gene names: NA

Gene position: 2625476-2625081 (Counterclockwise)

Preceding gene: 146339476

Following gene: 146339474

Centisome position: 35.21

GC content: 60.35

Gene sequence:

>396_bases
ATGAACAAGTCAGCGGCTAAGAAGATGAAGCAGCGCAGTGCCGGCAAGCCCGACATCGAGCTTGGCAAGCGCATTCGCCT
GCGGCGTGTGGAGCAGAAGATCTCGCAGGCGGAGCTCGGCGAAAAGCTCGGCGTGAGCTTCCAGCAGGTCCAGAAGTACG
AGAAGGGTGTCAACCGTGTCGGCGCTGCGCGTCTGCAGCAGATCGCCACCGCGCTCGACGTGCCCGTGACGTTCTTCTAC
GACGGTGACAACAAGGCCCGCGAAGTCGAGAGCCTGCTGTTCCTGGACTCGGCTTTCAGCCTGCGTTTGCTGCGTGCCTA
CAGCAAGATCAAGGACCAGACCGTGCAACGTCAGCTGGTGTCCTTGATGGAGTCGATTGCTGCGAACGAGGAATAG

Upstream 100 bases:

>100_bases
GACGAATTCATACATCCACAGCAACTTAAAACAGTATATATGGGTGAACCCCTGACCCATTTATTCGGGGGATTTCCGAT
GGAAGGACGGTAAAATCAGT

Downstream 100 bases:

>100_bases
GTCAGGCCGTCTGACAGGCCTCCCTGTGATGGGTATGAGCCATCTTCGCTCGAGGGCGCAACTTGGGGGCGCTAGGCGTT
TTGCCAGCTCGGGCGAGTTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNKSAAKKMKQRSAGKPDIELGKRIRLRRVEQKISQAELGEKLGVSFQQVQKYEKGVNRVGAARLQQIATALDVPVTFFY
DGDNKAREVESLLFLDSAFSLRLLRAYSKIKDQTVQRQLVSLMESIAANEE

Sequences:

>Translated_131_residues
MNKSAAKKMKQRSAGKPDIELGKRIRLRRVEQKISQAELGEKLGVSFQQVQKYEKGVNRVGAARLQQIATALDVPVTFFY
DGDNKAREVESLLFLDSAFSLRLLRAYSKIKDQTVQRQLVSLMESIAANEE
>Mature_131_residues
MNKSAAKKMKQRSAGKPDIELGKRIRLRRVEQKISQAELGEKLGVSFQQVQKYEKGVNRVGAARLQQIATALDVPVTFFY
DGDNKAREVESLLFLDSAFSLRLLRAYSKIKDQTVQRQLVSLMESIAANEE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14815; Mature: 14815

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSAAKKMKQRSAGKPDIELGKRIRLRRVEQKISQAELGEKLGVSFQQVQKYEKGVNRV
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GAARLQQIATALDVPVTFFYDGDNKAREVESLLFLDSAFSLRLLRAYSKIKDQTVQRQLV
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLMESIAANEE
HHHHHHHCCCC
>Mature Secondary Structure
MNKSAAKKMKQRSAGKPDIELGKRIRLRRVEQKISQAELGEKLGVSFQQVQKYEKGVNRV
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GAARLQQIATALDVPVTFFYDGDNKAREVESLLFLDSAFSLRLLRAYSKIKDQTVQRQLV
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLMESIAANEE
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]