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The map label for this gene is yicO [C]

Identifier: 146339471

GI number: 146339471

Start: 2619787

End: 2621187

Strand: Reverse

Name: yicO [C]

Synonym: BRADO2459

Alternate gene names: 146339471

Gene position: 2621187-2619787 (Counterclockwise)

Preceding gene: 146339472

Following gene: 146339467

Centisome position: 35.15

GC content: 66.81

Gene sequence:

>1401_bases
ATGCAGGACATGACGAAGGCGCAGCCAGCTGTGGCTGCCGGCAGTGCGGCGAACGGATCCACGCCCGCGGGCCGGCTCGA
CGGCTTCTTCAAGCTCAGCGAGCGCGGCACGACGGTGGGCCGCGAGCTGATGGCGGGCGCCACCACCTTCGCAGCAATGG
CCTACATCATCGCGGTCAATCCGGCGATCATGTCGAATGCCGGCATGGACCGCGCCGACCTCGTCAGCGCCACCGCGCTC
GCGGCGATCCTCGGCTCGTTGCTGATGGGGCTGTCGGCCAACCTGCCGCTGGCGGTCGCGCCCGCGATGGGCTCGAACGT
CATCTTCACCTACGTCATCGTCAAGCAGATGGGCATGCCCTGGCAGGGCGCGCTCGCCATGGTCGCCTTCACCGGCGTGC
TGTTCCTGATCCTCAGCCTGACCCGGTTGCGCGAGCGCGCCGCCCGGGACGTCCCGGAAACCCTGAAGATCGGCATCCAG
GCCGCCGTCGGCACCCTCATCGTGTTCATCGCGCTGCGCGGCGCCGGCTTCATCGTCGCCAATCCATCCACCTATGTATC
CATGGGCTCGCTGCGCAATCCACCGGTCATTCTCACGCTGGCCGGGCTGCTGCTGACCCCGGTGCTGGTCGCCCGCCGCG
TGCCCGGCGCGCTGATCATCTCGATCGCGGTGCTGACCCTGGTCGGGCTGTTCGTGCCGGGGGCCAACGGCAAGATGGTG
ACCACGATGCCGCAGACGCTGCTGTCCTGGCCGCGCTGGCCGAGCAGCACCTTCATGGCGATGGATGTCGGCTATCTGTT
CAGCCACTTCCTGATCGCGCTGCCCCTGTTGTTCTATTTTCTCTGCGCCGAGTTCTTCTCCACTTTGGGCACGCTGATCG
GCGTGACCGGCGCCGCCAACCTCCGCCGCCCGGACGGGTCGATCCCCAATGCGACCGCGGTGTTCGCCACCGATGCGACC
GCCTCGATCGTCGGGCCGGTGCTCGGCACCTCGGTGGTCACGGCCTATATCGAATCGATCACCGGCGTGCAGGCCGGCGG
CCGCACCGGGCTGACCTCGCTGACGGTCGCCGCGTTCTTCGGCCTGGCGCTGTTCTTCTGGCCGATCTTCGTTATCATCC
CGCCGCAGGCCACCGCGCCGGCGCTGGTCATGGTCGGCGTGCTGATGATGCAGGGCTTTGCCAAGGTCGACATGACCGAT
CTCGCCACCGCCGTGCCGATCGTCCTGATGCTGCTGGTCACGGTGCTGACCAACAACCTGATCAACGGCATGGCACTCGG
CACGCTCAGCTATATCGGCCTCGAACTCGCCTTCGGCCGCGGGGGCAAAATTCCCGGCATGGTCTGGGGTCTTGGCGTGA
TCTTCGTCGCCTATGCTGTTGTCACCGCTCAGATCTTCTGA

Upstream 100 bases:

>100_bases
GAGCAGGCGCCGCAAGGCTTCATCAACGTGCAGACCGGCAAGACGCATCCGGTGGTCTGGTGATCAAGGCTGCAACGGCG
CAGCAAGGACGGAGATCGCG

Downstream 100 bases:

>100_bases
ACGGCCGACGCCGGTTCACAGCTCTTGCAGCACCGCCTTGGTGACGTCGATCGTGCCGGCATGGCCGCCGAACTCGAACG
GCTTGAGACCAGCGGCGTAG

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MQDMTKAQPAVAAGSAANGSTPAGRLDGFFKLSERGTTVGRELMAGATTFAAMAYIIAVNPAIMSNAGMDRADLVSATAL
AAILGSLLMGLSANLPLAVAPAMGSNVIFTYVIVKQMGMPWQGALAMVAFTGVLFLILSLTRLRERAARDVPETLKIGIQ
AAVGTLIVFIALRGAGFIVANPSTYVSMGSLRNPPVILTLAGLLLTPVLVARRVPGALIISIAVLTLVGLFVPGANGKMV
TTMPQTLLSWPRWPSSTFMAMDVGYLFSHFLIALPLLFYFLCAEFFSTLGTLIGVTGAANLRRPDGSIPNATAVFATDAT
ASIVGPVLGTSVVTAYIESITGVQAGGRTGLTSLTVAAFFGLALFFWPIFVIIPPQATAPALVMVGVLMMQGFAKVDMTD
LATAVPIVLMLLVTVLTNNLINGMALGTLSYIGLELAFGRGGKIPGMVWGLGVIFVAYAVVTAQIF

Sequences:

>Translated_466_residues
MQDMTKAQPAVAAGSAANGSTPAGRLDGFFKLSERGTTVGRELMAGATTFAAMAYIIAVNPAIMSNAGMDRADLVSATAL
AAILGSLLMGLSANLPLAVAPAMGSNVIFTYVIVKQMGMPWQGALAMVAFTGVLFLILSLTRLRERAARDVPETLKIGIQ
AAVGTLIVFIALRGAGFIVANPSTYVSMGSLRNPPVILTLAGLLLTPVLVARRVPGALIISIAVLTLVGLFVPGANGKMV
TTMPQTLLSWPRWPSSTFMAMDVGYLFSHFLIALPLLFYFLCAEFFSTLGTLIGVTGAANLRRPDGSIPNATAVFATDAT
ASIVGPVLGTSVVTAYIESITGVQAGGRTGLTSLTVAAFFGLALFFWPIFVIIPPQATAPALVMVGVLMMQGFAKVDMTD
LATAVPIVLMLLVTVLTNNLINGMALGTLSYIGLELAFGRGGKIPGMVWGLGVIFVAYAVVTAQIF
>Mature_466_residues
MQDMTKAQPAVAAGSAANGSTPAGRLDGFFKLSERGTTVGRELMAGATTFAAMAYIIAVNPAIMSNAGMDRADLVSATAL
AAILGSLLMGLSANLPLAVAPAMGSNVIFTYVIVKQMGMPWQGALAMVAFTGVLFLILSLTRLRERAARDVPETLKIGIQ
AAVGTLIVFIALRGAGFIVANPSTYVSMGSLRNPPVILTLAGLLLTPVLVARRVPGALIISIAVLTLVGLFVPGANGKMV
TTMPQTLLSWPRWPSSTFMAMDVGYLFSHFLIALPLLFYFLCAEFFSTLGTLIGVTGAANLRRPDGSIPNATAVFATDAT
ASIVGPVLGTSVVTAYIESITGVQAGGRTGLTSLTVAAFFGLALFFWPIFVIIPPQATAPALVMVGVLMMQGFAKVDMTD
LATAVPIVLMLLVTVLTNNLINGMALGTLSYIGLELAFGRGGKIPGMVWGLGVIFVAYAVVTAQIF

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=421, Percent_Identity=38.479809976247, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1790150, Length=420, Percent_Identity=37.8571428571429, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1790499, Length=452, Percent_Identity=34.9557522123894, Blast_Score=211, Evalue=8e-56,
Organism=Escherichia coli, GI48994909, Length=420, Percent_Identity=35, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 48428; Mature: 48428

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDMTKAQPAVAAGSAANGSTPAGRLDGFFKLSERGTTVGRELMAGATTFAAMAYIIAVN
CCCCHHCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PAIMSNAGMDRADLVSATALAAILGSLLMGLSANLPLAVAPAMGSNVIFTYVIVKQMGMP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCC
WQGALAMVAFTGVLFLILSLTRLRERAARDVPETLKIGIQAAVGTLIVFIALRGAGFIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NPSTYVSMGSLRNPPVILTLAGLLLTPVLVARRVPGALIISIAVLTLVGLFVPGANGKMV
CCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEE
TTMPQTLLSWPRWPSSTFMAMDVGYLFSHFLIALPLLFYFLCAEFFSTLGTLIGVTGAAN
EECHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LRRPDGSIPNATAVFATDATASIVGPVLGTSVVTAYIESITGVQAGGRTGLTSLTVAAFF
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GLALFFWPIFVIIPPQATAPALVMVGVLMMQGFAKVDMTDLATAVPIVLMLLVTVLTNNL
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
INGMALGTLSYIGLELAFGRGGKIPGMVWGLGVIFVAYAVVTAQIF
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQDMTKAQPAVAAGSAANGSTPAGRLDGFFKLSERGTTVGRELMAGATTFAAMAYIIAVN
CCCCHHCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PAIMSNAGMDRADLVSATALAAILGSLLMGLSANLPLAVAPAMGSNVIFTYVIVKQMGMP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCC
WQGALAMVAFTGVLFLILSLTRLRERAARDVPETLKIGIQAAVGTLIVFIALRGAGFIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NPSTYVSMGSLRNPPVILTLAGLLLTPVLVARRVPGALIISIAVLTLVGLFVPGANGKMV
CCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEE
TTMPQTLLSWPRWPSSTFMAMDVGYLFSHFLIALPLLFYFLCAEFFSTLGTLIGVTGAAN
EECHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LRRPDGSIPNATAVFATDATASIVGPVLGTSVVTAYIESITGVQAGGRTGLTSLTVAAFF
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GLALFFWPIFVIIPPQATAPALVMVGVLMMQGFAKVDMTDLATAVPIVLMLLVTVLTNNL
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
INGMALGTLSYIGLELAFGRGGKIPGMVWGLGVIFVAYAVVTAQIF
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]