| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339436
Identifier: 146339436
GI number: 146339436
Start: 2578489
End: 2580285
Strand: Reverse
Name: 146339436
Synonym: BRADO2422
Alternate gene names: NA
Gene position: 2580285-2578489 (Counterclockwise)
Preceding gene: 146339437
Following gene: 146339435
Centisome position: 34.6
GC content: 63.27
Gene sequence:
>1797_bases ATGCTCGACACCACGCTTGCCGCACGCGTGCAGGCTTTTCTCGACAAGTTCGAAGCCACGCTTGTTGCGCGAGATCTCGA CGCCGCCGCGAGCCTGTTCGCTGCTGAATGCTATTGGCGCGACCTCGTCGCATTCACCTGGAACATCAAGACGATGGAAG GCCGCGACCAGGTTCGCGACATGCTCGGCGCCTGCCTGGCGCAGGTGAAGCCGCGCGATTGGAAAATTGCCGACGGCGAG ACACCGACCGAGGCCGATGGGGTGACCGAGTCCTGGATCTCGTTTGAGACCGAGGTCGCGCGCGGATACGGCCTGATCCG CCTCCAGAACGGCCAGATCTGGACGCTGTTGACGACGATGGTCGAACTGAAAGGTCATGAGGAGAAGGCCGGCTTCACCC GTCCGCTCGGCGCCCGGCATGGCGTCAATCCCGGCGCCAAGACCTGGAAGGAATTGCGCGACGAGGAAACCGAGCAGCTC GGCTTCAAGACCCAGCCCTACGTGGTCGTCATCGGCGGCGGCCAGGGCGGGATCGCGCTCGGCGCGCGGCTGCGTCAACT CGGCGTGCCCACCATCATCATCGAGAAGAATGCCCGCGCCGGCGATTCCTGGCGCAACCGCTACAAGTCGCTCTGCCTGC ACGACCCGGTCTGGTACGATCACCTGCCCTACATCGACTTCCCGAAGAACTGGCCGGTGTTCGCGCCCAAGGACAAGATC GGCGACTGGCTGGAGATGTACACCAAGGTCATGGAGCTGAACTACTGGACCAGCACCACGGCCAAGCACGCCGCATGGGA CGACGCCAAGAAGGAATGGACCGTCGTCGTCGAGCGCGACGGCAAGGAGATCACGCTCAGGCCGAAGCATCTCGTCTTTG CGACGGGCATGTCGGCCAAGCCGAACATGCCGCAGTTCAAGGGCATGGACAGCTTCGAGGGTGAGCAGCATCATTCCTCG CGCCATCCCGGTCCCGACCGCTACAAGGGCAAGAAGGTGGTGGTGATCGGCTCGAACAATTCCGCGCATGACATCTGCGC CGCGCTGTACGAGGCGGGCGTCGACGTCACCATGGTGCAGCGCTCGTCCACCCATATCGTGCGCTCGGATTCGCTGATGG AATCCCTCGGCGATCTGTATTCCGAGCGCGCGGTCCGCAGCGGCATGACGACGGCGAAGGCCGACCTGATCTTCGCCTCG CTGCCCTACAGGATCCTCAATCAGTTTCAGAAGCCGGTCTACGACAAGATCCGCAAGGACGACGCCGACTTCTACGCGGG GCTGGAGAAGGCCGGCTTCCGGGTCGATTTCGGCGACGACGAGTCCGGGCTGTTCATGAAGTACCTGCGCCGCGGCTCCG GCTACTACATCGATGTCGGCGCCTCGCAGCTCATCATCGACGGCAAGATCAAGCTGGTCGCCGGCCAGGTCGAGGAAATC ACGCCCCATGGCGTCAAGCTCGACAACGGCAAGGAGCTGCCGGCCGATGTGATCGTCTACGCCACCGGCTACAGCTCGAT GAATGGCTTCGTCGCCGATCTCATCAGCCGGGACATGGCAGACAAGGTCGGCAAGGTCTGGGGACTCGGCTCCAATACGA CCAAGGACCCCGGCCCATGGGAGGGCGAACAGCGCAACATGTGGAAGCCGACGCAGCAGGAAGCGCTGTGGTTCCACGGC GGCAATCTGCACCAGTCGCGCCACTACTCGCAATTCCTGTCGCTTCAGTTGAAGGCGCGCTACGAGGGCATCCCGACGCC GGTCTATGGCCTGCAAACCGTCCATCACAAGGCCTAG
Upstream 100 bases:
>100_bases AAACGCAGAAATTGAACGGCACGAGTCTGGATTCGCTCCATGGTTGAGATAAGCTTGCGCCAAACTCGCAGAGCAATCGA GAACGAATGGGGAGGACATC
Downstream 100 bases:
>100_bases GATCGCGCCGGGCTCCTCGGCAAGCATGGCCGGCTCCTGCACGAGCCGGGCAACCCTGCGCGCACGCGGGATGGAGAATT CTCTGGCGGCTGGTTCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MLDTTLAARVQAFLDKFEATLVARDLDAAASLFAAECYWRDLVAFTWNIKTMEGRDQVRDMLGACLAQVKPRDWKIADGE TPTEADGVTESWISFETEVARGYGLIRLQNGQIWTLLTTMVELKGHEEKAGFTRPLGARHGVNPGAKTWKELRDEETEQL GFKTQPYVVVIGGGQGGIALGARLRQLGVPTIIIEKNARAGDSWRNRYKSLCLHDPVWYDHLPYIDFPKNWPVFAPKDKI GDWLEMYTKVMELNYWTSTTAKHAAWDDAKKEWTVVVERDGKEITLRPKHLVFATGMSAKPNMPQFKGMDSFEGEQHHSS RHPGPDRYKGKKVVVIGSNNSAHDICAALYEAGVDVTMVQRSSTHIVRSDSLMESLGDLYSERAVRSGMTTAKADLIFAS LPYRILNQFQKPVYDKIRKDDADFYAGLEKAGFRVDFGDDESGLFMKYLRRGSGYYIDVGASQLIIDGKIKLVAGQVEEI TPHGVKLDNGKELPADVIVYATGYSSMNGFVADLISRDMADKVGKVWGLGSNTTKDPGPWEGEQRNMWKPTQQEALWFHG GNLHQSRHYSQFLSLQLKARYEGIPTPVYGLQTVHHKA
Sequences:
>Translated_598_residues MLDTTLAARVQAFLDKFEATLVARDLDAAASLFAAECYWRDLVAFTWNIKTMEGRDQVRDMLGACLAQVKPRDWKIADGE TPTEADGVTESWISFETEVARGYGLIRLQNGQIWTLLTTMVELKGHEEKAGFTRPLGARHGVNPGAKTWKELRDEETEQL GFKTQPYVVVIGGGQGGIALGARLRQLGVPTIIIEKNARAGDSWRNRYKSLCLHDPVWYDHLPYIDFPKNWPVFAPKDKI GDWLEMYTKVMELNYWTSTTAKHAAWDDAKKEWTVVVERDGKEITLRPKHLVFATGMSAKPNMPQFKGMDSFEGEQHHSS RHPGPDRYKGKKVVVIGSNNSAHDICAALYEAGVDVTMVQRSSTHIVRSDSLMESLGDLYSERAVRSGMTTAKADLIFAS LPYRILNQFQKPVYDKIRKDDADFYAGLEKAGFRVDFGDDESGLFMKYLRRGSGYYIDVGASQLIIDGKIKLVAGQVEEI TPHGVKLDNGKELPADVIVYATGYSSMNGFVADLISRDMADKVGKVWGLGSNTTKDPGPWEGEQRNMWKPTQQEALWFHG GNLHQSRHYSQFLSLQLKARYEGIPTPVYGLQTVHHKA >Mature_598_residues MLDTTLAARVQAFLDKFEATLVARDLDAAASLFAAECYWRDLVAFTWNIKTMEGRDQVRDMLGACLAQVKPRDWKIADGE TPTEADGVTESWISFETEVARGYGLIRLQNGQIWTLLTTMVELKGHEEKAGFTRPLGARHGVNPGAKTWKELRDEETEQL GFKTQPYVVVIGGGQGGIALGARLRQLGVPTIIIEKNARAGDSWRNRYKSLCLHDPVWYDHLPYIDFPKNWPVFAPKDKI GDWLEMYTKVMELNYWTSTTAKHAAWDDAKKEWTVVVERDGKEITLRPKHLVFATGMSAKPNMPQFKGMDSFEGEQHHSS RHPGPDRYKGKKVVVIGSNNSAHDICAALYEAGVDVTMVQRSSTHIVRSDSLMESLGDLYSERAVRSGMTTAKADLIFAS LPYRILNQFQKPVYDKIRKDDADFYAGLEKAGFRVDFGDDESGLFMKYLRRGSGYYIDVGASQLIIDGKIKLVAGQVEEI TPHGVKLDNGKELPADVIVYATGYSSMNGFVADLISRDMADKVGKVWGLGSNTTKDPGPWEGEQRNMWKPTQQEALWFHG GNLHQSRHYSQFLSLQLKARYEGIPTPVYGLQTVHHKA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503755, Length=372, Percent_Identity=22.5806451612903, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI4503759, Length=375, Percent_Identity=22.6666666666667, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4503757, Length=364, Percent_Identity=24.1758241758242, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI221316672, Length=370, Percent_Identity=23.7837837837838, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI221316674, Length=370, Percent_Identity=23.7837837837838, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25145785, Length=367, Percent_Identity=22.3433242506812, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 67121; Mature: 67121
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTTLAARVQAFLDKFEATLVARDLDAAASLFAAECYWRDLVAFTWNIKTMEGRDQVRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCHHHHHH MLGACLAQVKPRDWKIADGETPTEADGVTESWISFETEVARGYGLIRLQNGQIWTLLTTM HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHH VELKGHEEKAGFTRPLGARHGVNPGAKTWKELRDEETEQLGFKTQPYVVVIGGGQGGIAL HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH GARLRQLGVPTIIIEKNARAGDSWRNRYKSLCLHDPVWYDHLPYIDFPKNWPVFAPKDKI HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH GDWLEMYTKVMELNYWTSTTAKHAAWDDAKKEWTVVVERDGKEITLRPKHLVFATGMSAK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCCC PNMPQFKGMDSFEGEQHHSSRHPGPDRYKGKKVVVIGSNNSAHDICAALYEAGVDVTMVQ CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEE RSSTHIVRSDSLMESLGDLYSERAVRSGMTTAKADLIFASLPYRILNQFQKPVYDKIRKD CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHHHHHHHHHHCC DADFYAGLEKAGFRVDFGDDESGLFMKYLRRGSGYYIDVGASQLIIDGKIKLVAGQVEEI CHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCEEEECCEEEEEECCHHHC TPHGVKLDNGKELPADVIVYATGYSSMNGFVADLISRDMADKVGKVWGLGSNTTKDPGPW CCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC EGEQRNMWKPTQQEALWFHGGNLHQSRHYSQFLSLQLKARYEGIPTPVYGLQTVHHKA CCCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLDTTLAARVQAFLDKFEATLVARDLDAAASLFAAECYWRDLVAFTWNIKTMEGRDQVRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCHHHHHH MLGACLAQVKPRDWKIADGETPTEADGVTESWISFETEVARGYGLIRLQNGQIWTLLTTM HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHH VELKGHEEKAGFTRPLGARHGVNPGAKTWKELRDEETEQLGFKTQPYVVVIGGGQGGIAL HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH GARLRQLGVPTIIIEKNARAGDSWRNRYKSLCLHDPVWYDHLPYIDFPKNWPVFAPKDKI HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH GDWLEMYTKVMELNYWTSTTAKHAAWDDAKKEWTVVVERDGKEITLRPKHLVFATGMSAK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCCC PNMPQFKGMDSFEGEQHHSSRHPGPDRYKGKKVVVIGSNNSAHDICAALYEAGVDVTMVQ CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEE RSSTHIVRSDSLMESLGDLYSERAVRSGMTTAKADLIFASLPYRILNQFQKPVYDKIRKD CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHHHHHHHHHHCC DADFYAGLEKAGFRVDFGDDESGLFMKYLRRGSGYYIDVGASQLIIDGKIKLVAGQVEEI CHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCEEEECCEEEEEECCHHHC TPHGVKLDNGKELPADVIVYATGYSSMNGFVADLISRDMADKVGKVWGLGSNTTKDPGPW CCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC EGEQRNMWKPTQQEALWFHGGNLHQSRHYSQFLSLQLKARYEGIPTPVYGLQTVHHKA CCCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA