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The map label for this gene is ygaE [C]

Identifier: 146339437

GI number: 146339437

Start: 2580628

End: 2581263

Strand: Reverse

Name: ygaE [C]

Synonym: BRADO2423

Alternate gene names: 146339437

Gene position: 2581263-2580628 (Counterclockwise)

Preceding gene: 146339441

Following gene: 146339436

Centisome position: 34.62

GC content: 71.07

Gene sequence:

>636_bases
ATGCCGGACGAGAGTCTCACCACAGCCCACCGCATCGCCGAAGCCATCACCGAGCGCATCGTCAGCGGCGCGCTGCCGGC
CGACGCGCCGCTGCGGCAGGACCACATCGCGCGCGAGTTCAAGTCCAGCCACGTGCCGGTGCGCGAGGCGTTCCGGCAGC
TCGAGGCGCTCTATCTGGTGGTCGCAACGCCGAGGCGCGGCGTGCGGGTGGCGCCGCTCGACGCGAAGGCGACCAAGGAG
ATCGTCGAGATGCGGGCTGCGCTCGAAGTCGTGGCGCTGCGCAACGCCGCGCCGCGCTACACGCCGGCGCATCTTGCCGC
GATCGAGCTCGCGCTGATCGAGGGCGACAACGCCGAAACGATTTCGGAATTCGAGACCGCCAACCGCGCCTTCCATCGCG
CGCTCGTCGCTCCTTGCGCGATGCCGCGCCTGCTCGCGAGCCTGGACGGACTGCGCCTCGCCAATTCACGCCTCGTGCTC
GCGATGGCCCGCACCGCCGGCTGGCGCCCGCGCAGCAACGGCGATCATCGCCAGATCCTGCAGGCGCTGCGCGAACGGCA
GATCGGGCACGCTTGCGAGCTGCTGACACGGCACAACCAGACCATCGAGCGGCTGGCACGGCCGGGCGGCGCGTAG

Upstream 100 bases:

>100_bases
TAGATTATCATAGAAATTATCTATGAAAATTCGCTATCACTGGACCTTAGAATACCACTGCTATTCCAGCATGCGCTTTT
TCAATAGATAATCTACCATC

Downstream 100 bases:

>100_bases
CGCTGCCACCGGCTCGACGGTTGGTTTGGAGACGCTCACGTCCGAGTCGGTCAGAGCCGGCATGATTTCATCGACCGCAT
GGATCGCGCGCTGCTCTGAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Family Regulatory Protein; Transcription Regulator; Transcriptional Regulator GntR Family Protein; GntR-Family Transcriptional Regulator; GntR Family Regulatory; Biotin Regulatory Protein BioR; Transcription Regulator Protein; Transcriptional Regulator Protein; Regulator PutR For Proline Utilization GntR Family; GntR Family Transcription Regulator Protein; Regulatory Protein GntR HTH

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPDESLTTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLVVATPRRGVRVAPLDAKATKE
IVEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAETISEFETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVL
AMARTAGWRPRSNGDHRQILQALRERQIGHACELLTRHNQTIERLARPGGA

Sequences:

>Translated_211_residues
MPDESLTTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLVVATPRRGVRVAPLDAKATKE
IVEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAETISEFETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVL
AMARTAGWRPRSNGDHRQILQALRERQIGHACELLTRHNQTIERLARPGGA
>Mature_210_residues
PDESLTTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLVVATPRRGVRVAPLDAKATKEI
VEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAETISEFETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLA
MARTAGWRPRSNGDHRQILQALRERQIGHACELLTRHNQTIERLARPGGA

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23228; Mature: 23097

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDESLTTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHE
VATPRRGVRVAPLDAKATKEIVEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAET
EECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCHH
ISEFETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLAMARTAGWRPRSNGDHRQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHEEEHHHCCCCCCCCCCHHHHH
QALRERQIGHACELLTRHNQTIERLARPGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDESLTTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHE
VATPRRGVRVAPLDAKATKEIVEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAET
EECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCHH
ISEFETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLAMARTAGWRPRSNGDHRQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHEEEHHHCCCCCCCCCCHHHHH
QALRERQIGHACELLTRHNQTIERLARPGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA