| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yjiB [H]
Identifier: 146339369
GI number: 146339369
Start: 2503062
End: 2504225
Strand: Reverse
Name: yjiB [H]
Synonym: BRADO2350
Alternate gene names: 146339369
Gene position: 2504225-2503062 (Counterclockwise)
Preceding gene: 146339383
Following gene: 146339367
Centisome position: 33.58
GC content: 65.81
Gene sequence:
>1164_bases ATGTTCACATTCGATCCGTATTCGCCGGCGGTCGATGCCGACCCGTTCCCGTTCTACAAGACCTTGCGCGACGAACATCC CTGTTTCTGGAGCCCGCAGGCCCAGGTGTGGATCCTGTCGCGCTACGCCGATGTCGCGGCGGCCGGCACCAACTGGCAGA CCTATTCCTCGGCCAAGGGCAACCTGATGACCGAACTGCCGAACCGCGCCGGCGCGACGCTCGGCACCACCGATCCGCCG CGTCACGACCGCCTGCGCGGCCTCGTCCAGCACGCTTTCATGAAGCGCAATCTGGAGAGCCTGTCCGGCCCGATCCGCGA CATCGCCCGGGACAGCGCCGAGTCGCTGCGCGGCCAGGAGCGCTTCGACTTCATCGAGGCGTTCTCGTCCAAGTTCACCG TGCGTGTGCTGTTCGCCGCGCTCGGCCTGCCGCTCGGCGACGAGCAGACGGTGCGCGACAAGGCGGTGCTGATGGTGCAG AGCGACCCGGTGAGCCGCGCCAAGGGGCCGCAGCACATTGCCGCCTACAATTGGATGCAGGACTATGCGGCCGGCGTGAT CGCCGAGCGCCGCGCCCGGCCGCAGAACGATCTGATCTCGCATTTCAGCATGGCCGAGATCGACGGCGACAAGCTCGACG AGCGCGAGGTGCTGCTGACGACGACCACCCTGATCATGGCCGGCATCGAGTCGCTCGGCGGCTTTATGAGCATGCTGGCC TATAACCTGGCCGATCACCCAGACGCGCGGCGCGCGGTCGTCGCCAATCCCGATCTGCTGACGGATGCGGTCGAAGAGTC GCTGCGCTTCAACACCTCGGCCCAACGCTTCCGACGCTGCCTGCAGAAGGATCTCACCCTGCATGGCCAAACCATGCGCG AAGGCGACTTCGTCTGCCTCGCCTACGGCTCCGCCAATCGCGACGAGCGGCAGTTTCCCAATCCCGATGTCTACGACATC ACCCGCAAGCCGCGCGGCCATCTCGGCTTCGGTGGCGGCGTGCATGCGTGCCTCGGCTCCGCGATCGCGCGCATGGCGAT CAGGATCGCATTCGACGAGCTGCACAAGGTGGTGCCTGAGTATCGCCGCACCCAGGAGCAACTGCCCTGGATGCCGTCGT CGACTTTCCGCAGCCCGTTATATCTGGAGCTGACGGTGCATTAG
Upstream 100 bases:
>100_bases AGTCTTGACCGGCGTTCGTGTCTTACGCGGCGGCGACGCTCCGCTTAGGATCGTGAAAAGAACAACAACGACCATACTCA ATGGAGAGGAGGCCCGACAG
Downstream 100 bases:
>100_bases GTGCGGGAGTGAGAGTCCCATTGTGCAAGGCGCAGCGAACATAGTTGCCTCTCACCAGACAACAACATCCGCTCCACGTC TTGGCGGGGAAGGACTAACG
Product: putative cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKGNLMTELPNRAGATLGTTDPP RHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQERFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQ SDPVSRAKGPQHIAAYNWMQDYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCLAYGSANRDERQFPNPDVYDI TRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPEYRRTQEQLPWMPSSTFRSPLYLELTVH
Sequences:
>Translated_387_residues MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKGNLMTELPNRAGATLGTTDPP RHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQERFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQ SDPVSRAKGPQHIAAYNWMQDYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCLAYGSANRDERQFPNPDVYDI TRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPEYRRTQEQLPWMPSSTFRSPLYLELTVH >Mature_387_residues MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKGNLMTELPNRAGATLGTTDPP RHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQERFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQ SDPVSRAKGPQHIAAYNWMQDYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCLAYGSANRDERQFPNPDVYDI TRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPEYRRTQEQLPWMPSSTFRSPLYLELTVH
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43499; Mature: 43499
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKG CCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCC NLMTELPNRAGATLGTTDPPRHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQE CHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH RFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQSDPVSRAKGPQHIAAYNWMQ HHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCEEEEEEECCCCCCCCCCCHHHHHHHHH DYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCL HHHCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCCEEEE AYGSANRDERQFPNPDVYDITRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPE EECCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRRTQEQLPWMPSSTFRSPLYLELTVH HHHHHHHCCCCCCHHCCCCEEEEEEEC >Mature Secondary Structure MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKG CCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCC NLMTELPNRAGATLGTTDPPRHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQE CHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH RFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQSDPVSRAKGPQHIAAYNWMQ HHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCEEEEEEECCCCCCCCCCCHHHHHHHHH DYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCL HHHCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCCEEEE AYGSANRDERQFPNPDVYDITRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPE EECCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRRTQEQLPWMPSSTFRSPLYLELTVH HHHHHHHCCCCCCHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]