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The map label for this gene is ytfH [C]

Identifier: 146339367

GI number: 146339367

Start: 2501062

End: 2501385

Strand: Reverse

Name: ytfH [C]

Synonym: BRADO2348

Alternate gene names: 146339367

Gene position: 2501385-2501062 (Counterclockwise)

Preceding gene: 146339369

Following gene: 146339365

Centisome position: 33.55

GC content: 68.21

Gene sequence:

>324_bases
GTGCTGATCGACCAGATCGCCGACAAATGGTCGATGATGGTGCTGGCCGTGCTCGACGGCGGCCCACTGCGTTTCAACGC
GATCAAGAAGCAACTCGAGGGCGTGACGCAGAAGGCGCTGACGCAATGCCTGCGCCGGCTCGAGCGCAACGGCCTCGTCG
CGCGCGAGGTGATCGCGGACTCGCCGGTCGCCGTGCAATACGAGATCACCCCGCTCGGCCGCACCCTGCAGCCGCCGTTC
CGGGCGCTCTATGCCTGGACCATCGCCAAGATGCCCGAGGTCGAGCAGGCCCGGCAGGTGTTCGACCAGCGCCGGGGGCG
CTGA

Upstream 100 bases:

>100_bases
TATCCCAAAGGAAACCACCGCCGTGACCGATGCTTCGACGTCCGAGACCGCCCCGCTCCGCTGCAAGCCGCAGCACTTCT
CATCGGAATGCCCGAGCCGG

Downstream 100 bases:

>100_bases
TTCCAGGCGGCCGCGAGCCGCTACTGAAACGCGACCTCGGCGAAGCTGCGCAGCTTGCGCGAATGCAGCCGCTCCGATTC
CTGGTGCTTCAGCAATTCCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLIDQIADKWSMMVLAVLDGGPLRFNAIKKQLEGVTQKALTQCLRRLERNGLVAREVIADSPVAVQYEITPLGRTLQPPF
RALYAWTIAKMPEVEQARQVFDQRRGR

Sequences:

>Translated_107_residues
MLIDQIADKWSMMVLAVLDGGPLRFNAIKKQLEGVTQKALTQCLRRLERNGLVAREVIADSPVAVQYEITPLGRTLQPPF
RALYAWTIAKMPEVEQARQVFDQRRGR
>Mature_107_residues
MLIDQIADKWSMMVLAVLDGGPLRFNAIKKQLEGVTQKALTQCLRRLERNGLVAREVIADSPVAVQYEITPLGRTLQPPF
RALYAWTIAKMPEVEQARQVFDQRRGR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=93, Percent_Identity=31.1827956989247, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12193; Mature: 12193

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDQIADKWSMMVLAVLDGGPLRFNAIKKQLEGVTQKALTQCLRRLERNGLVAREVIAD
CCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
SPVAVQYEITPLGRTLQPPFRALYAWTIAKMPEVEQARQVFDQRRGR
CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIDQIADKWSMMVLAVLDGGPLRFNAIKKQLEGVTQKALTQCLRRLERNGLVAREVIAD
CCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
SPVAVQYEITPLGRTLQPPFRALYAWTIAKMPEVEQARQVFDQRRGR
CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]