| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339309
Identifier: 146339309
GI number: 146339309
Start: 2432632
End: 2435157
Strand: Direct
Name: 146339309
Synonym: BRADO2285
Alternate gene names: NA
Gene position: 2432632-2435157 (Clockwise)
Preceding gene: 146339308
Following gene: 146339312
Centisome position: 32.62
GC content: 66.43
Gene sequence:
>2526_bases GTGATCGAATGCGACGCACCGGCCGTCGCCCTTGCGCCAACGCCAGCCCTGCACGCCGCCATCGCGGGAGCCTGTCGCCG CATCGCACCGCTGTGGCCGCTGAAAAACTTTGTCGCGGTCAATCCATTCATGGGCTTCAGCGGTCAGAGCTTCCACGCCA CCTGCGCGACCTTGCACCGGGTCGCTCGGCTCGAGACGCTGATGCCGCGCGCGTTCTACCGCGAGGCGATCCGTTCCGGA ACGATCGAACGAGCCGACCTTGCGGCGGCACTCGCCGCCGCCCCCGCCGACTGGTGCCTGCCGACCGAAGTCGGCGAGTT GCTGAAGCTCGCGGACAACGACAAGACGGTGCGGAAGCATCCCGCAGTGGTCGCGACGGTGGCGGAGGTGCTCACCGAAC TCGCTGCCGGCGACCGCCATGTCGCCCGCACGGCGTTCATGACCGACGAGATCTCGCGCTGGTGCGCGGCATATTTCGAT GAGGGACAATCGGTGTGGCGGATGCCGGCGCGCGGCTTGCGTCCGTATGCTGCCTGGCGCGCCAGTGTCCGATACGACCG CAACCCCGAAGCGATGGGCATCGCGCGTTTTCGCGAGCTGGTCGCGGAGTTGCCGGAGGACTACGTCGCTGCGATCGCAA CGGTGGTCGATCGACTCGGCGTGCCGGCGCGCGCGATCGAGGACTATCTGCATCAGGCGCTGCTCGAGATCGGCGGGTGG GCGGCCTATGCGCGCTACCTGATGTGGGATCACGAGCTCGCGGGCGATCGTGACGACACGCTTGAGCAACTGCTGGCCAT CCGGGTCGTCTGGGGCTACGCGTTGTTTGTCCAGCGCACCGATGCGGAGTTTCGCGAGGCATGGCGGCGGGCGATGGAGC AGGCGGCACTGCCACCCCTCGACGACAAGCTCGGCGGCGATCCGGATCTGTGCATCAACATGGTGCTGCAGGAAGCCTAT GAGATCGCGTTCCGCCGCCGCCTGCTGCATCGGCTCGGGCAGTCGCCTGCGGCGCAGGCATCGGGCGCGAGGCCGGCTGT GCAGGCCGCGTTCTGCATCGACGTGCGCTCGGAAGTGTATCGGCGCGCGATGGAATCCATCAGCAGCGCGGTCGAGACCA TCGGTTTCGCCGGCTTCTTCGGCTTTCCGATCGAGTTTGTGCCGATCGGTCACATCACCGGCCGCGCGCATTGTCCAGTG CTGCTGCGACCGCAATTCACCGTCTGCGAGGCCGTGGATGGGACGAGCGAAGACGAGGATTCCGAGATCCTGGTCATGCG CCTGCTGCGCCGCCGCGTGCGCAAGGCCTGGAAGTCGTTCAAGCTGTCGGCGGTCTCCTCCTTCATCTATGTCGAGACCG CCGGGCTGCTGTTCGCCGGCAAGATCCTGAGCGACAGCCTCGCCGTGACCCGTACGGTGCATGATCCGAACACCGATGGA TTGGATGATGCTGTGATCGGCCGCCTCGGCCCACGCATCTCTCCCCGTCTTGTCGGCGGGCGCGCGACCGGTTTCGACCA GGCGCAGCGCGTGGCGATGGCGGAGGCCGTGTTGCGGGCGATGTCGATGACGGGACCGTTCGCGCGGCTCGTCATGCTCA CCGGCCACGGCAGCACGTCCGTGAACAATCCGCACGCGGCGGGGCTCGATTGCGGCGCGTGCGGCGGTAACACCGGCGAA GCCAATGCGCGCGTCGCCGCAGCGATCCTTAATGATTCCGATGTCCGGGCCGGCCTGCGCGACCGCGGCATCGATATTCC CGAGGACACGTTCTTCCTCGGCTGCCTGCACGACACGACCACCGACGAGATCAAATTGTACGATCTGGAACGTCTCCCTG CATCGCATCGCGAGGACCTGCGCGTGCTCCGAGAGCTCCTGGCAAAGGCCACCTCGCTGACGCGCCTTGAGCGTGCCACG CTGCTCGGCGTCGCCGGCCGCGCCGATGCCGAGCAGCGGGTCGTCACGCGCAGCCGTGACTGGGCCCAGGTGCGGCCCGA ATGGGGCCTTGCCGGAAATGCCAGCTTCATCGCTGCGCCCCGCGCCCGCACACGCGGCATCGATCTGGGTGGACGTGCCT TCCTGCATGAGTATGACTGGCGGCAGGACAAGGACTTCGCCACGCTGCAGCTGATCATGACAGCGCCGATGGTGGTGGCG AGCTGGATCAATCTTCAATACTACGGCTCGACCGTCAACAACGCCGCGTTCGGTGCCGGAAACAAGGTCCTTCACAACGT CGCCGGTACGATCGGCGTGCTGGAGGGCAATGCCGGCGATCTCAAAGTGGGGCTGCCGTGGCAATCCGTCCACGACGGCA CACGTTTCGTGCACGAGCCGCTGCGGCTCGCGGTGCTGATCGAGGCGCCCTTGGAAGCGATCGGCCGCGTGATCGCGCAG AATAGCGGTGTGCGCGAGCTGGTCGATAACGCCTGGCTGCATCTTTACGCCATATCCGGCCAGGGCCGCGTGTCGCATCG TTATCGCAGTGGACTGCAGTGGCAGGCAATTGATCCGCAATCGTAA
Upstream 100 bases:
>100_bases CCATCGCCAATCGCCTGGTCCTGCAGTATTGGCCCGGCCCAGCGCCGAAGCCCGCTCCGATTGCTCTTCCCATTGTGCTG AGGGAGCCCACATGAGCGAC
Downstream 100 bases:
>100_bases TCGAGTTTGAGGACCTGCAAAGGTCAGGGAGAGTCTCCGACCGGCGACGCGCGTCCGCGACTCCGCTGCCGCGACGTAGG CTGCCCTTGCTTGTTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MIECDAPAVALAPTPALHAAIAGACRRIAPLWPLKNFVAVNPFMGFSGQSFHATCATLHRVARLETLMPRAFYREAIRSG TIERADLAAALAAAPADWCLPTEVGELLKLADNDKTVRKHPAVVATVAEVLTELAAGDRHVARTAFMTDEISRWCAAYFD EGQSVWRMPARGLRPYAAWRASVRYDRNPEAMGIARFRELVAELPEDYVAAIATVVDRLGVPARAIEDYLHQALLEIGGW AAYARYLMWDHELAGDRDDTLEQLLAIRVVWGYALFVQRTDAEFREAWRRAMEQAALPPLDDKLGGDPDLCINMVLQEAY EIAFRRRLLHRLGQSPAAQASGARPAVQAAFCIDVRSEVYRRAMESISSAVETIGFAGFFGFPIEFVPIGHITGRAHCPV LLRPQFTVCEAVDGTSEDEDSEILVMRLLRRRVRKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDG LDDAVIGRLGPRISPRLVGGRATGFDQAQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTSVNNPHAAGLDCGACGGNTGE ANARVAAAILNDSDVRAGLRDRGIDIPEDTFFLGCLHDTTTDEIKLYDLERLPASHREDLRVLRELLAKATSLTRLERAT LLGVAGRADAEQRVVTRSRDWAQVRPEWGLAGNASFIAAPRARTRGIDLGGRAFLHEYDWRQDKDFATLQLIMTAPMVVA SWINLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEPLRLAVLIEAPLEAIGRVIAQ NSGVRELVDNAWLHLYAISGQGRVSHRYRSGLQWQAIDPQS
Sequences:
>Translated_841_residues MIECDAPAVALAPTPALHAAIAGACRRIAPLWPLKNFVAVNPFMGFSGQSFHATCATLHRVARLETLMPRAFYREAIRSG TIERADLAAALAAAPADWCLPTEVGELLKLADNDKTVRKHPAVVATVAEVLTELAAGDRHVARTAFMTDEISRWCAAYFD EGQSVWRMPARGLRPYAAWRASVRYDRNPEAMGIARFRELVAELPEDYVAAIATVVDRLGVPARAIEDYLHQALLEIGGW AAYARYLMWDHELAGDRDDTLEQLLAIRVVWGYALFVQRTDAEFREAWRRAMEQAALPPLDDKLGGDPDLCINMVLQEAY EIAFRRRLLHRLGQSPAAQASGARPAVQAAFCIDVRSEVYRRAMESISSAVETIGFAGFFGFPIEFVPIGHITGRAHCPV LLRPQFTVCEAVDGTSEDEDSEILVMRLLRRRVRKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDG LDDAVIGRLGPRISPRLVGGRATGFDQAQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTSVNNPHAAGLDCGACGGNTGE ANARVAAAILNDSDVRAGLRDRGIDIPEDTFFLGCLHDTTTDEIKLYDLERLPASHREDLRVLRELLAKATSLTRLERAT LLGVAGRADAEQRVVTRSRDWAQVRPEWGLAGNASFIAAPRARTRGIDLGGRAFLHEYDWRQDKDFATLQLIMTAPMVVA SWINLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEPLRLAVLIEAPLEAIGRVIAQ NSGVRELVDNAWLHLYAISGQGRVSHRYRSGLQWQAIDPQS >Mature_841_residues MIECDAPAVALAPTPALHAAIAGACRRIAPLWPLKNFVAVNPFMGFSGQSFHATCATLHRVARLETLMPRAFYREAIRSG TIERADLAAALAAAPADWCLPTEVGELLKLADNDKTVRKHPAVVATVAEVLTELAAGDRHVARTAFMTDEISRWCAAYFD EGQSVWRMPARGLRPYAAWRASVRYDRNPEAMGIARFRELVAELPEDYVAAIATVVDRLGVPARAIEDYLHQALLEIGGW AAYARYLMWDHELAGDRDDTLEQLLAIRVVWGYALFVQRTDAEFREAWRRAMEQAALPPLDDKLGGDPDLCINMVLQEAY EIAFRRRLLHRLGQSPAAQASGARPAVQAAFCIDVRSEVYRRAMESISSAVETIGFAGFFGFPIEFVPIGHITGRAHCPV LLRPQFTVCEAVDGTSEDEDSEILVMRLLRRRVRKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDG LDDAVIGRLGPRISPRLVGGRATGFDQAQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTSVNNPHAAGLDCGACGGNTGE ANARVAAAILNDSDVRAGLRDRGIDIPEDTFFLGCLHDTTTDEIKLYDLERLPASHREDLRVLRELLAKATSLTRLERAT LLGVAGRADAEQRVVTRSRDWAQVRPEWGLAGNASFIAAPRARTRGIDLGGRAFLHEYDWRQDKDFATLQLIMTAPMVVA SWINLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEPLRLAVLIEAPLEAIGRVIAQ NSGVRELVDNAWLHLYAISGQGRVSHRYRSGLQWQAIDPQS
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2285_BRASO (A4YQE4)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001204357.1 - STRING: A4YQE4 - GeneID: 5119623 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO2285 - eggNOG: COG3002 - HOGENOM: HBG520117 - OMA: FAEDWSE - ProtClustDB: CLSK2400063 - BioCyc: BSP376:BRADO2285-MONOMER - HAMAP: MF_01871 - InterPro: IPR018752
Pfam domain/function: PF10070 DUF2309
EC number: NA
Molecular weight: Translated: 92171; Mature: 92171
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIECDAPAVALAPTPALHAAIAGACRRIAPLWPLKNFVAVNPFMGFSGQSFHATCATLHR CCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHH VARLETLMPRAFYREAIRSGTIERADLAAALAAAPADWCLPTEVGELLKLADNDKTVRKH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHC PAVVATVAEVLTELAAGDRHVARTAFMTDEISRWCAAYFDEGQSVWRMPARGLRPYAAWR CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHH ASVRYDRNPEAMGIARFRELVAELPEDYVAAIATVVDRLGVPARAIEDYLHQALLEIGGW HHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH AAYARYLMWDHELAGDRDDTLEQLLAIRVVWGYALFVQRTDAEFREAWRRAMEQAALPPL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DDKLGGDPDLCINMVLQEAYEIAFRRRLLHRLGQSPAAQASGARPAVQAAFCIDVRSEVY CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH RRAMESISSAVETIGFAGFFGFPIEFVPIGHITGRAHCPVLLRPQFTVCEAVDGTSEDED HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCCC SEILVMRLLRRRVRKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCHHEEEEECCCCCCC LDDAVIGRLGPRISPRLVGGRATGFDQAQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTS CHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC VNNPHAAGLDCGACGGNTGEANARVAAAILNDSDVRAGLRDRGIDIPEDTFFLGCLHDTT CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCHHHCCCCCCCCCEEEEEECCCC TDEIKLYDLERLPASHREDLRVLRELLAKATSLTRLERATLLGVAGRADAEQRVVTRSRD CCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCC WAQVRPEWGLAGNASFIAAPRARTRGIDLGGRAFLHEYDWRQDKDFATLQLIMTAPMVVA HHHCCCCCCCCCCCCEEECCCCHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SWINLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEP HHHCEEEECCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCEEECCCHHHHCCHHHHHHHH LRLAVLIEAPLEAIGRVIAQNSGVRELVDNAWLHLYAISGQGRVSHRYRSGLQWQAIDPQ HHEEEEHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHHCCCEEEECCCC S C >Mature Secondary Structure MIECDAPAVALAPTPALHAAIAGACRRIAPLWPLKNFVAVNPFMGFSGQSFHATCATLHR CCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHH VARLETLMPRAFYREAIRSGTIERADLAAALAAAPADWCLPTEVGELLKLADNDKTVRKH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHC PAVVATVAEVLTELAAGDRHVARTAFMTDEISRWCAAYFDEGQSVWRMPARGLRPYAAWR CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHH ASVRYDRNPEAMGIARFRELVAELPEDYVAAIATVVDRLGVPARAIEDYLHQALLEIGGW HHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH AAYARYLMWDHELAGDRDDTLEQLLAIRVVWGYALFVQRTDAEFREAWRRAMEQAALPPL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DDKLGGDPDLCINMVLQEAYEIAFRRRLLHRLGQSPAAQASGARPAVQAAFCIDVRSEVY CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH RRAMESISSAVETIGFAGFFGFPIEFVPIGHITGRAHCPVLLRPQFTVCEAVDGTSEDED HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCCC SEILVMRLLRRRVRKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCHHEEEEECCCCCCC LDDAVIGRLGPRISPRLVGGRATGFDQAQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTS CHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC VNNPHAAGLDCGACGGNTGEANARVAAAILNDSDVRAGLRDRGIDIPEDTFFLGCLHDTT CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCHHHCCCCCCCCCEEEEEECCCC TDEIKLYDLERLPASHREDLRVLRELLAKATSLTRLERATLLGVAGRADAEQRVVTRSRD CCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCC WAQVRPEWGLAGNASFIAAPRARTRGIDLGGRAFLHEYDWRQDKDFATLQLIMTAPMVVA HHHCCCCCCCCCCCCEEECCCCHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SWINLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEP HHHCEEEECCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCEEECCCHHHHCCHHHHHHHH LRLAVLIEAPLEAIGRVIAQNSGVRELVDNAWLHLYAISGQGRVSHRYRSGLQWQAIDPQ HHEEEEHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHHCCCEEEECCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA