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The map label for this gene is clpS [H]

Identifier: 146339195

GI number: 146339195

Start: 2290759

End: 2291106

Strand: Reverse

Name: clpS [H]

Synonym: BRADO2155

Alternate gene names: 146339195

Gene position: 2291106-2290759 (Counterclockwise)

Preceding gene: 146339198

Following gene: 146339190

Centisome position: 30.73

GC content: 64.94

Gene sequence:

>348_bases
GTGGCGGCTCCGCCGCAGCAGGAACACACGGGCGCGCCCTCCATGAACGACGCCGTCACCAAGCCGAAGACGAAGGTCCG
CACCAAGGTCGAGCGCCCGCGGCTCTACAAGGTCATCCTCGTCAATGACGACTTCACGCCGCGCGACTTCGTCGTGATGA
TCCTGAAGGCGGAATTCCGCATGACCGAGGACCAGGCCTACAAGGTCATGATCACGGCGCATAAGCTCGGCGTCTGCGTG
GTCGCCGTGTTCACCAAGGACGTGGCCGAGACCAAGGCGACGCGGGCCACCGATGCCGGCCGTGCCAAGGGCTATCCGCT
GCTGTTCACCATCGAGCCGGAGGAGTGA

Upstream 100 bases:

>100_bases
TCCCCGGTGTTGCCCGGAGATCGAGCAGGCGGCTGCCGCGTGCGCCCTTCGACCAATGTCGCGCAGCCCGTGGTTTCCCG
GAGAGCCGAGACGCTGTATT

Downstream 100 bases:

>100_bases
GGCGGCGAACTAATCGCCCTCCTCGCGCAGCCCGAACACGCGCTGCTCGGTCGCGAGGCCGGCGATCGGAAAGGCGCCGA
GATCCTGCCACGACTCCGGA

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAAPPQQEHTGAPSMNDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFRMTEDQAYKVMITAHKLGVCV
VAVFTKDVAETKATRATDAGRAKGYPLLFTIEPEE

Sequences:

>Translated_115_residues
MAAPPQQEHTGAPSMNDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFRMTEDQAYKVMITAHKLGVCV
VAVFTKDVAETKATRATDAGRAKGYPLLFTIEPEE
>Mature_114_residues
AAPPQQEHTGAPSMNDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFRMTEDQAYKVMITAHKLGVCVV
AVFTKDVAETKATRATDAGRAKGYPLLFTIEPEE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=88, Percent_Identity=42.0454545454545, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 12881; Mature: 12750

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPPQQEHTGAPSMNDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCHHEEEEEEECCCC
MTEDQAYKVMITAHKLGVCVVAVFTKDVAETKATRATDAGRAKGYPLLFTIEPEE
CCCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
AAPPQQEHTGAPSMNDAVTKPKTKVRTKVERPRLYKVILVNDDFTPRDFVVMILKAEFR
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCHHEEEEEEECCCC
MTEDQAYKVMITAHKLGVCVVAVFTKDVAETKATRATDAGRAKGYPLLFTIEPEE
CCCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]