| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is corA [H]
Identifier: 146339183
GI number: 146339183
Start: 2279613
End: 2280590
Strand: Direct
Name: corA [H]
Synonym: BRADO2143
Alternate gene names: 146339183
Gene position: 2279613-2280590 (Clockwise)
Preceding gene: 146339181
Following gene: 146339184
Centisome position: 30.57
GC content: 61.76
Gene sequence:
>978_bases ATGTTCTCGGTGTTCGTCCCGTCCGATCAGGCGTTGAAGAAGGCGGAGATCACCGACCCGGCGGCTCTGCCCGACAATGC GGTCTGGGTCGACCTCTTCAATCCGAGCGGTGCAGAAGACCGGGCCGTCGAGAAGCTCTCGGGAATCGCGGTCCCGACGC GGGAGGACATGCAGGAGATCGAGATCTCCAGCCGCCTCTACATCGAGAACGGCGCCCGCTACATGACGGCAACCTTGATG TGTCACTCGGATACCGACATGCCCCGGACGACGGCGGTGACCTTCATCCTGGCAGGGCACCGCCTGGTGACGGTGCGCTA CGATCAGCCGCGGCCGTTCGCCGTGGTCGAGGCCAAGCTCGCCCGCAGCTGCGCACCCGGCATTACCGGAGAGATGGTGC TGATGGAATTGCTCGACGCGGTGATCGATCGCTGCGCCGACATCCTCGAGCGGGTCGGTGCCGACATCGACCAGGTCAGC CACGAGATCTTCGAGCCGAACAACGAGCGGCACGGCCACGCCAAGCAGTATTCCCAGATCCTGATCGCGATCGGCCGCAA GGGCGACCTCACCTCGAAAGTACGTGAAAGCCTGGTCTCGATCGGTCGCCTCGTGACCTTTCTTTCCGCCGTCGTCGAAG GCGTGAAATGGTCAAAGGACATGCGCGAGCAGCTCAAGACCATGCAGCGCGACGTCGCCTCGCTGACCGACCACGCCTCC TATCTCGCCGGCAAGATCACCTTCGTGCTCGATGCGATGCTCGGTGTCGTCAATCTCGAGCAGAACAACATCATCAAGCT GTTCTCGGTCATGGCGGTCGTGCTGATGCCGCCGACCTTGATCGCGTCGATCTACGGTATGAACTTCAAGAACATGCCGG AGCTCGAATGGGCGCACGGCTATCCGATGGCGCTCGTGCTGATGCTGATCTGCGCGATCGTGCCGTACTACATCTTCAAG CTGAAGAAGTGGCTGTAG
Upstream 100 bases:
>100_bases GCGAAAAGCCGATGGACCGTTTTGGCAAGCTGCGTCACAAGGCGGCAGCATCCTGCCGGTAATCCGCCGAAAACCCCATC GCGATTCGGAGTCTCCCTTC
Downstream 100 bases:
>100_bases CCGCGCTGATTGAAGGGAAGTCAGAGCCCGGGCTTGTCGCGGGTGCGAGCACGCCGGTCTCGTGCTGATGCGGCAGAGCA AGCCTCGCCCGCGCCGCGAT
Product: putative magnesium/cobalt transport protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MFSVFVPSDQALKKAEITDPAALPDNAVWVDLFNPSGAEDRAVEKLSGIAVPTREDMQEIEISSRLYIENGARYMTATLM CHSDTDMPRTTAVTFILAGHRLVTVRYDQPRPFAVVEAKLARSCAPGITGEMVLMELLDAVIDRCADILERVGADIDQVS HEIFEPNNERHGHAKQYSQILIAIGRKGDLTSKVRESLVSIGRLVTFLSAVVEGVKWSKDMREQLKTMQRDVASLTDHAS YLAGKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASIYGMNFKNMPELEWAHGYPMALVLMLICAIVPYYIFK LKKWL
Sequences:
>Translated_325_residues MFSVFVPSDQALKKAEITDPAALPDNAVWVDLFNPSGAEDRAVEKLSGIAVPTREDMQEIEISSRLYIENGARYMTATLM CHSDTDMPRTTAVTFILAGHRLVTVRYDQPRPFAVVEAKLARSCAPGITGEMVLMELLDAVIDRCADILERVGADIDQVS HEIFEPNNERHGHAKQYSQILIAIGRKGDLTSKVRESLVSIGRLVTFLSAVVEGVKWSKDMREQLKTMQRDVASLTDHAS YLAGKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASIYGMNFKNMPELEWAHGYPMALVLMLICAIVPYYIFK LKKWL >Mature_325_residues MFSVFVPSDQALKKAEITDPAALPDNAVWVDLFNPSGAEDRAVEKLSGIAVPTREDMQEIEISSRLYIENGARYMTATLM CHSDTDMPRTTAVTFILAGHRLVTVRYDQPRPFAVVEAKLARSCAPGITGEMVLMELLDAVIDRCADILERVGADIDQVS HEIFEPNNERHGHAKQYSQILIAIGRKGDLTSKVRESLVSIGRLVTFLSAVVEGVKWSKDMREQLKTMQRDVASLTDHAS YLAGKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASIYGMNFKNMPELEWAHGYPMALVLMLICAIVPYYIFK LKKWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=327, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36248; Mature: 36248
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVFVPSDQALKKAEITDPAALPDNAVWVDLFNPSGAEDRAVEKLSGIAVPTREDMQEI CEEEECCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHH EISSRLYIENGARYMTATLMCHSDTDMPRTTAVTFILAGHRLVTVRYDQPRPFAVVEAKL HHHCEEEEECCCEEEEEEEEEECCCCCCHHHHHHHEEECCEEEEEEECCCCCHHHHHHHH ARSCAPGITGEMVLMELLDAVIDRCADILERVGADIDQVSHEIFEPNNERHGHAKQYSQI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHH LIAIGRKGDLTSKVRESLVSIGRLVTFLSAVVEGVKWSKDMREQLKTMQRDVASLTDHAS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YLAGKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASIYGMNFKNMPELEWAHG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC YPMALVLMLICAIVPYYIFKLKKWL CHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSVFVPSDQALKKAEITDPAALPDNAVWVDLFNPSGAEDRAVEKLSGIAVPTREDMQEI CEEEECCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHH EISSRLYIENGARYMTATLMCHSDTDMPRTTAVTFILAGHRLVTVRYDQPRPFAVVEAKL HHHCEEEEECCCEEEEEEEEEECCCCCCHHHHHHHEEECCEEEEEEECCCCCHHHHHHHH ARSCAPGITGEMVLMELLDAVIDRCADILERVGADIDQVSHEIFEPNNERHGHAKQYSQI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHH LIAIGRKGDLTSKVRESLVSIGRLVTFLSAVVEGVKWSKDMREQLKTMQRDVASLTDHAS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YLAGKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASIYGMNFKNMPELEWAHG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC YPMALVLMLICAIVPYYIFKLKKWL CHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]