| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339181
Identifier: 146339181
GI number: 146339181
Start: 2277341
End: 2278417
Strand: Direct
Name: 146339181
Synonym: BRADO2141
Alternate gene names: NA
Gene position: 2277341-2278417 (Clockwise)
Preceding gene: 146339177
Following gene: 146339183
Centisome position: 30.54
GC content: 72.14
Gene sequence:
>1077_bases ATGACCCCCGCGGCCGCGCGGTCGCGGGACGCCGGGCACGCGCATGAGCACGGCGGGCCTGTGCCGGCGCTGCAGTCCGG ACCTCCGCTGGCGGCCGTGCCGTTGCCGCGGCCGCGCCCGGGGGAGGCGCCACGGTCCGGCTCTCGCGAGCCGGCGAAAG ACTCTGCCAAGGCGGGCACAAACGACGAGGGTGCCGAGCAGCCCAAGGAGACCGGCGCCAAGACGCCGCCTCCGCCGCAG CTCTCGGCCTGCCGCGTGGCGCTGACAGAGGACATCGCAATCGCTCCCTCGATCCCGCCGATCAAGGGGCCGGGCGCGTG CGGCGGCGACGATCTGGTGCGGCTGGAGGCGGTGGTGCTGCCGGACAAGCGGCGGGTGGCGCTGACGCCGGCCGCGACGA TGCGCTGCACGATGGCCGCCGCCGTGGCCAATTGGGTGCGGGGCGATCTGGCTCCGCTCGCGGCCCGTCTCGGCAGCCCG ATCGCCGCGCTCGACAACTATGATTCGTACCAGTGTCGCGGCCGCAACAACATCGCCGGTGCGCAGATGTCGGAGCATGG CCGCGCCAATGCGCTCGACGTCCGCGGCTTCAAGCTGTCCGATGGCCGCATGATCGAGCTGACCGATCGCACCCAGCCGC GCGAGTTGCGCGAGGCGGTGCTGCATTCGGTATGTGCGCAGTTCGCGACCGTGCTGGGTCCGGACAGCGACTGGTATCAC GAGGATCATATCCACCTCGATCTCGCCGAGCGCCGCAGCAACTACCGCATCTGCCAATGGGACGTGCTCGATCCGCTGCC GAAGGTGGCGCCGCTGATGCCGGCGATGCGGCCGGACGACGCGCCGCCCCGCGAGACGGCGGAAGCCGATGACGACGGTC AGGCGGGCAAGGGAAGCAAGGGCGCGAGCCGTGCGGGATCGGACCGGTCAGCCGACACGTCCACGTCGCATGCCGCTCCG GCTGCGCCTGCCTCCGGCGGTTCGGCTGCCGCCGAGGGCGACGAAGCCGAACCGGCGCCGCCGCCCGCGCCCCCACTGGC CAAGGGCAGCAAGAAGAAGCACAAGACGAGGTCATAG
Upstream 100 bases:
>100_bases CGCGCGCCGCAGCGAGCGCAAATGGCCTTGTCGCGGCCATGACGTCGCGCGGGGCCCGATGGTTAGCGCGGCCGTTGCGG CGCTCGCCTTGAGCTGGGTC
Downstream 100 bases:
>100_bases CCAGACCGCGGAGCGCAGTCCGGGCAGCTCCGGCGCGGCCGCGCGGGAGTTACAATGGCTTGTACTGCCTGGTCCCTTGC GCCCAAACAAAAAGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Conserved Protein; Extensin Domain-Containing Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTPAAARSRDAGHAHEHGGPVPALQSGPPLAAVPLPRPRPGEAPRSGSREPAKDSAKAGTNDEGAEQPKETGAKTPPPPQ LSACRVALTEDIAIAPSIPPIKGPGACGGDDLVRLEAVVLPDKRRVALTPAATMRCTMAAAVANWVRGDLAPLAARLGSP IAALDNYDSYQCRGRNNIAGAQMSEHGRANALDVRGFKLSDGRMIELTDRTQPRELREAVLHSVCAQFATVLGPDSDWYH EDHIHLDLAERRSNYRICQWDVLDPLPKVAPLMPAMRPDDAPPRETAEADDDGQAGKGSKGASRAGSDRSADTSTSHAAP AAPASGGSAAAEGDEAEPAPPPAPPLAKGSKKKHKTRS
Sequences:
>Translated_358_residues MTPAAARSRDAGHAHEHGGPVPALQSGPPLAAVPLPRPRPGEAPRSGSREPAKDSAKAGTNDEGAEQPKETGAKTPPPPQ LSACRVALTEDIAIAPSIPPIKGPGACGGDDLVRLEAVVLPDKRRVALTPAATMRCTMAAAVANWVRGDLAPLAARLGSP IAALDNYDSYQCRGRNNIAGAQMSEHGRANALDVRGFKLSDGRMIELTDRTQPRELREAVLHSVCAQFATVLGPDSDWYH EDHIHLDLAERRSNYRICQWDVLDPLPKVAPLMPAMRPDDAPPRETAEADDDGQAGKGSKGASRAGSDRSADTSTSHAAP AAPASGGSAAAEGDEAEPAPPPAPPLAKGSKKKHKTRS >Mature_357_residues TPAAARSRDAGHAHEHGGPVPALQSGPPLAAVPLPRPRPGEAPRSGSREPAKDSAKAGTNDEGAEQPKETGAKTPPPPQL SACRVALTEDIAIAPSIPPIKGPGACGGDDLVRLEAVVLPDKRRVALTPAATMRCTMAAAVANWVRGDLAPLAARLGSPI AALDNYDSYQCRGRNNIAGAQMSEHGRANALDVRGFKLSDGRMIELTDRTQPRELREAVLHSVCAQFATVLGPDSDWYHE DHIHLDLAERRSNYRICQWDVLDPLPKVAPLMPAMRPDDAPPRETAEADDDGQAGKGSKGASRAGSDRSADTSTSHAAPA APASGGSAAAEGDEAEPAPPPAPPLAKGSKKKHKTRS
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37367; Mature: 37236
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAAARSRDAGHAHEHGGPVPALQSGPPLAAVPLPRPRPGEAPRSGSREPAKDSAKAGT CCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCC NDEGAEQPKETGAKTPPPPQLSACRVALTEDIAIAPSIPPIKGPGACGGDDLVRLEAVVL CCCCCCCHHHCCCCCCCCCCHHHHEEEHHCCEEECCCCCCCCCCCCCCCCCEEEEEEEEC PDKRRVALTPAATMRCTMAAAVANWVRGDLAPLAARLGSPIAALDNYDSYQCRGRNNIAG CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCC AQMSEHGRANALDVRGFKLSDGRMIELTDRTQPRELREAVLHSVCAQFATVLGPDSDWYH CCHHHCCCCCEEEECCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC EDHIHLDLAERRSNYRICQWDVLDPLPKVAPLMPAMRPDDAPPRETAEADDDGQAGKGSK CCCEEEEHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GASRAGSDRSADTSTSHAAPAAPASGGSAAAEGDEAEPAPPPAPPLAKGSKKKHKTRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPAAARSRDAGHAHEHGGPVPALQSGPPLAAVPLPRPRPGEAPRSGSREPAKDSAKAGT CCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCC NDEGAEQPKETGAKTPPPPQLSACRVALTEDIAIAPSIPPIKGPGACGGDDLVRLEAVVL CCCCCCCHHHCCCCCCCCCCHHHHEEEHHCCEEECCCCCCCCCCCCCCCCCEEEEEEEEC PDKRRVALTPAATMRCTMAAAVANWVRGDLAPLAARLGSPIAALDNYDSYQCRGRNNIAG CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCC AQMSEHGRANALDVRGFKLSDGRMIELTDRTQPRELREAVLHSVCAQFATVLGPDSDWYH CCHHHCCCCCEEEECCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC EDHIHLDLAERRSNYRICQWDVLDPLPKVAPLMPAMRPDDAPPRETAEADDDGQAGKGSK CCCEEEEHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GASRAGSDRSADTSTSHAAPAAPASGGSAAAEGDEAEPAPPPAPPLAKGSKKKHKTRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA