Click here to switch to the map view.

The map label for this gene is 146338789

Identifier: 146338789

GI number: 146338789

Start: 1841327

End: 1842163

Strand: Direct

Name: 146338789

Synonym: BRADO1723

Alternate gene names: NA

Gene position: 1841327-1842163 (Clockwise)

Preceding gene: 146338788

Following gene: 146338790

Centisome position: 24.69

GC content: 69.65

Gene sequence:

>837_bases
ATGCCGGACCCTGCCAAGGGGGCAGGGAAGAGTGACGCGCCGGGCCTCAAGCGATCCGGCGCGCTGCGGTTCGCGATCGG
CACGGCCTGGGTCGCTTGCGTCGCGATCCTGCTGGCACTCGGCGTTTGGCAGGTCGAGCGCCGCGCCTGGAAGCTCGATC
TGATCGACCGCGTCGATCGCCGCGTGCACGCCGCGCCGGTGTCCGTGCCCGATCGGACCGCGTGGCCGGCGATCAATCGC
AACGACGACGAATACAAGCGGGTGACCTTGAGCGGCCGCTTCCTCAACGACTGCGAGACGCTGGTCCAGGCGCTGACTGT
CGAGGGGCCTGGCTATTGGGTCGTGACGCCGCTGCAGACGTCCGACGGCCTGGTGCTGGTCAACCGCGGCTTCGTGCCGT
CGGAGCGCCGCGAGCCTGCGAGCCGGAGCGCCGGGAACCCGGACGGCATCGTCAGCGTGACCGGCTTGCTGCGGATCTCC
GAGCCCGGCGGGGGCTTCCTGCGCCACAACGATCCACAGGCCAATCGCTGGTATTCACGTGACGTCGCAGCCATCGCGGC
GGCGCGTGGCCTGTCCGACGTCGCGCCCTTTTTCGTCGATGCCGATGCGACGCCCAATCCGGGCGGCTACCCGGTCGGTG
GCCTGACCGTGATCGCGTTTCCGAACAACCATCTGGTTTACGCGCTGACCTGGTTTACATTGGCGCTGATGCTGGCCGGC
GCCGGCGTGCAGCGGCTCCGCCGCGCGCGCGGCGAGGGCGACCCGGCGGCAGGGCAGGACGTGGAATGGGATCATCGGCA
GCAGGACATGCGCAGGCAGGAGGCGTCGCCATTGTGA

Upstream 100 bases:

>100_bases
CCATCATCATGGTGGTGATCGCGCTCTCCGGCTCGCTGTGGGTCATGCATCATCTGACCACCAACATGATGCCGGTGCAC
GAGATGGGGTCGACGCCGTG

Downstream 100 bases:

>100_bases
GCGAATGCGCCTTGGCGATATCAGCGCTGATCTCGGACGCCGCCGCATGAGGAACGAAGCGCCGAACCTTCCGATCGGAG
CGGTCGCCGCGCTCGCTACG

Product: putative SURF1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MPDPAKGAGKSDAPGLKRSGALRFAIGTAWVACVAILLALGVWQVERRAWKLDLIDRVDRRVHAAPVSVPDRTAWPAINR
NDDEYKRVTLSGRFLNDCETLVQALTVEGPGYWVVTPLQTSDGLVLVNRGFVPSERREPASRSAGNPDGIVSVTGLLRIS
EPGGGFLRHNDPQANRWYSRDVAAIAAARGLSDVAPFFVDADATPNPGGYPVGGLTVIAFPNNHLVYALTWFTLALMLAG
AGVQRLRRARGEGDPAAGQDVEWDHRQQDMRRQEASPL

Sequences:

>Translated_278_residues
MPDPAKGAGKSDAPGLKRSGALRFAIGTAWVACVAILLALGVWQVERRAWKLDLIDRVDRRVHAAPVSVPDRTAWPAINR
NDDEYKRVTLSGRFLNDCETLVQALTVEGPGYWVVTPLQTSDGLVLVNRGFVPSERREPASRSAGNPDGIVSVTGLLRIS
EPGGGFLRHNDPQANRWYSRDVAAIAAARGLSDVAPFFVDADATPNPGGYPVGGLTVIAFPNNHLVYALTWFTLALMLAG
AGVQRLRRARGEGDPAAGQDVEWDHRQQDMRRQEASPL
>Mature_277_residues
PDPAKGAGKSDAPGLKRSGALRFAIGTAWVACVAILLALGVWQVERRAWKLDLIDRVDRRVHAAPVSVPDRTAWPAINRN
DDEYKRVTLSGRFLNDCETLVQALTVEGPGYWVVTPLQTSDGLVLVNRGFVPSERREPASRSAGNPDGIVSVTGLLRISE
PGGGFLRHNDPQANRWYSRDVAAIAAARGLSDVAPFFVDADATPNPGGYPVGGLTVIAFPNNHLVYALTWFTLALMLAGA
GVQRLRRARGEGDPAAGQDVEWDHRQQDMRRQEASPL

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=216, Percent_Identity=34.2592592592593, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17553856, Length=234, Percent_Identity=30.7692307692308, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI17864366, Length=221, Percent_Identity=35.2941176470588, Blast_Score=116, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 30135; Mature: 30004

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPAKGAGKSDAPGLKRSGALRFAIGTAWVACVAILLALGVWQVERRAWKLDLIDRVDR
CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVHAAPVSVPDRTAWPAINRNDDEYKRVTLSGRFLNDCETLVQALTVEGPGYWVVTPLQT
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEC
SDGLVLVNRGFVPSERREPASRSAGNPDGIVSVTGLLRISEPGGGFLRHNDPQANRWYSR
CCCEEEEECCCCCCHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHH
DVAAIAAARGLSDVAPFFVDADATPNPGGYPVGGLTVIAFPNNHLVYALTWFTLALMLAG
HHHHHHHHHCHHHHCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHC
AGVQRLRRARGEGDPAAGQDVEWDHRQQDMRRQEASPL
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDPAKGAGKSDAPGLKRSGALRFAIGTAWVACVAILLALGVWQVERRAWKLDLIDRVDR
CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVHAAPVSVPDRTAWPAINRNDDEYKRVTLSGRFLNDCETLVQALTVEGPGYWVVTPLQT
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEC
SDGLVLVNRGFVPSERREPASRSAGNPDGIVSVTGLLRISEPGGGFLRHNDPQANRWYSR
CCCEEEEECCCCCCHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHH
DVAAIAAARGLSDVAPFFVDADATPNPGGYPVGGLTVIAFPNNHLVYALTWFTLALMLAG
HHHHHHHHHCHHHHCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHC
AGVQRLRRARGEGDPAAGQDVEWDHRQQDMRRQEASPL
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]