| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is atoS [C]
Identifier: 146338768
GI number: 146338768
Start: 1817126
End: 1818490
Strand: Direct
Name: atoS [C]
Synonym: BRADO1702
Alternate gene names: 146338768
Gene position: 1817126-1818490 (Clockwise)
Preceding gene: 146338767
Following gene: 146338772
Centisome position: 24.37
GC content: 63.66
Gene sequence:
>1365_bases ATGGCAAAGGCCACGCACTCTCCTGAATCGGGCGCGGACACGCTGCTGAAGCTGATCGCGAGCAGTAGCGCGCTTGAATT CGACAGCGAGCGCGAGGGCGTCTGGATCGAAGTCATCCGCAAGATGGACGAGGTCTATTCCGACCTCCTGCGCTACGAGG TCGATCTTGAGCACAAGAATGCCGAGCTCGAGGAAGCCCAGGCCTTCGTCACCAACGTCATCGAGTCGGTCTCGGACATT CTCGTTGTGTGCGACGCCAGGGGAACGGTGCAACAAGCCAACTCGGCCTTTCAGCGCACCTCGGGCCGCACGCTCGAGGA CATCGCGGGGCGCAATATCGCCGAGATGATAGATCACGATCACCACGGCAAGCTCGCGGCGCTGCTGAAGCCGCGCAGCG GTGCCGAGGTGGTCGATGGCGAGCTGCGCTTTGCCGCCGGCGGATCGAGCTCCGACCTGTTCGCGATCAACAGCTCGCCG CGGCACGACCATCGCGGCCGCTTCATCGGCGTCGTGCTGACGGGACGTCCGATCGGCGAGCTGCGCCGCGCCTACGAGGC CCTGCACAAGGCCCACCAGGAACTACAGCGGGCGCAGCGGCAGCTGGTCGAGCAGGAGAAGATGGCGAGCCTCGGCCGCC TCGTCGCCGGCGTCGCGCACGAATTGAACAATCCGATCAGCTTCGTCTATGGCAATGTTCACACGTTGATGCGCTACCGG ACCGCCCTGGTCGGCTATCTGGAAGCGGTCCACGAGCAGCCAGTCTCCGACGAGGTCGCAGCGCTCCGCAAGGAGCTGCG CATCGATGCCATCGTCGAGGATTTCGGGCCGCTGATCGAGGGAACGCTGGAAGGCGCGGTGCGCATCAGCGAAATCGTCA AGAACTTGCGCCGCCTGTCGTTCTCCAAGCTCGGCGAGGTCCAGCGCGTCAATATCGAGCGGCTGATCAACACGGCGGTG CTGTGGGCTGGCCGCACCAAGCAGCACCGCGTCGATATTCAGATCGAGGTCGAGCCGGATCTGTGGATCTCCGGCAATGA AGGTCAGCTGCATCAGGTGATCGTCAATCTGGTCGAGAATGCGATCGACGCGATGCGCATAACCGAGCAGCCGCGCCTCG TCGTTGCGGCGTCGCGACAGGGCAACGAGATCGCGTTCCGGGTCACCGACAACGGTCCGGGGATCGACAAGGATCATCTC AGTCGCATCTTCGAGCCGTTCTTCACGACCAAACGCGTCGGCGAGGGGACCGGCCTCGGCCTTTGGATCAGCTACGGAAT CGTACGCGAGCATGGTGGCGAACTCGCTGCCAGCAACGAGTCAGAAGGCGGCGCGACGTTCTCGTTCACTCTGCCCGCAG CCTGA
Upstream 100 bases:
>100_bases CTCGAAAAATACGAGGGTAACATCAGCCGCGTGGCCAGCGAGCTTGGCCTGTCCCGGGTCGGACTGCGCAACAAACTATC GAGATACGATCTGAAAAAAA
Downstream 100 bases:
>100_bases CGCTCCGCGCCTCAGGACTCCTGATCGAGCTCGGCTGCAACCTGTCCATAGTTGAGCAGCGCGACCAGCGTCGTGCCTCC AACGACATTACCAAGCAGCG
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MAKATHSPESGADTLLKLIASSSALEFDSEREGVWIEVIRKMDEVYSDLLRYEVDLEHKNAELEEAQAFVTNVIESVSDI LVVCDARGTVQQANSAFQRTSGRTLEDIAGRNIAEMIDHDHHGKLAALLKPRSGAEVVDGELRFAAGGSSSDLFAINSSP RHDHRGRFIGVVLTGRPIGELRRAYEALHKAHQELQRAQRQLVEQEKMASLGRLVAGVAHELNNPISFVYGNVHTLMRYR TALVGYLEAVHEQPVSDEVAALRKELRIDAIVEDFGPLIEGTLEGAVRISEIVKNLRRLSFSKLGEVQRVNIERLINTAV LWAGRTKQHRVDIQIEVEPDLWISGNEGQLHQVIVNLVENAIDAMRITEQPRLVVAASRQGNEIAFRVTDNGPGIDKDHL SRIFEPFFTTKRVGEGTGLGLWISYGIVREHGGELAASNESEGGATFSFTLPAA
Sequences:
>Translated_454_residues MAKATHSPESGADTLLKLIASSSALEFDSEREGVWIEVIRKMDEVYSDLLRYEVDLEHKNAELEEAQAFVTNVIESVSDI LVVCDARGTVQQANSAFQRTSGRTLEDIAGRNIAEMIDHDHHGKLAALLKPRSGAEVVDGELRFAAGGSSSDLFAINSSP RHDHRGRFIGVVLTGRPIGELRRAYEALHKAHQELQRAQRQLVEQEKMASLGRLVAGVAHELNNPISFVYGNVHTLMRYR TALVGYLEAVHEQPVSDEVAALRKELRIDAIVEDFGPLIEGTLEGAVRISEIVKNLRRLSFSKLGEVQRVNIERLINTAV LWAGRTKQHRVDIQIEVEPDLWISGNEGQLHQVIVNLVENAIDAMRITEQPRLVVAASRQGNEIAFRVTDNGPGIDKDHL SRIFEPFFTTKRVGEGTGLGLWISYGIVREHGGELAASNESEGGATFSFTLPAA >Mature_453_residues AKATHSPESGADTLLKLIASSSALEFDSEREGVWIEVIRKMDEVYSDLLRYEVDLEHKNAELEEAQAFVTNVIESVSDIL VVCDARGTVQQANSAFQRTSGRTLEDIAGRNIAEMIDHDHHGKLAALLKPRSGAEVVDGELRFAAGGSSSDLFAINSSPR HDHRGRFIGVVLTGRPIGELRRAYEALHKAHQELQRAQRQLVEQEKMASLGRLVAGVAHELNNPISFVYGNVHTLMRYRT ALVGYLEAVHEQPVSDEVAALRKELRIDAIVEDFGPLIEGTLEGAVRISEIVKNLRRLSFSKLGEVQRVNIERLINTAVL WAGRTKQHRVDIQIEVEPDLWISGNEGQLHQVIVNLVENAIDAMRITEQPRLVVAASRQGNEIAFRVTDNGPGIDKDHLS RIFEPFFTTKRVGEGTGLGLWISYGIVREHGGELAASNESEGGATFSFTLPAA
Specific function: Member Of The Two-Component Regulatory System Atos/Atoc; May Activate Atoc By Phosphorylation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=397, Percent_Identity=27.2040302267003, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1790436, Length=262, Percent_Identity=31.6793893129771, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1786600, Length=273, Percent_Identity=27.8388278388278, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI87081816, Length=264, Percent_Identity=28.030303030303, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI48994928, Length=431, Percent_Identity=21.1136890951276, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788393, Length=207, Percent_Identity=28.5024154589372, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI145693157, Length=122, Percent_Identity=32.7868852459016, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1787894, Length=252, Percent_Identity=26.1904761904762, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786912, Length=257, Percent_Identity=26.4591439688716, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789149, Length=364, Percent_Identity=24.7252747252747, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50123; Mature: 49992
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKATHSPESGADTLLKLIASSSALEFDSEREGVWIEVIRKMDEVYSDLLRYEVDLEHKN CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC AELEEAQAFVTNVIESVSDILVVCDARGTVQQANSAFQRTSGRTLEDIAGRNIAEMIDHD CHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHCCC HHGKLAALLKPRSGAEVVDGELRFAAGGSSSDLFAINSSPRHDHRGRFIGVVLTGRPIGE CCCCEEEEECCCCCCCEECCCEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHH LRRAYEALHKAHQELQRAQRQLVEQEKMASLGRLVAGVAHELNNPISFVYGNVHTLMRYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH TALVGYLEAVHEQPVSDEVAALRKELRIDAIVEDFGPLIEGTLEGAVRISEIVKNLRRLS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKLGEVQRVNIERLINTAVLWAGRTKQHRVDIQIEVEPDLWISGNEGQLHQVIVNLVEN HHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCHHHHHHHHHHHH AIDAMRITEQPRLVVAASRQGNEIAFRVTDNGPGIDKDHLSRIFEPFFTTKRVGEGTGLG HHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE LWISYGIVREHGGELAASNESEGGATFSFTLPAA HHEEHHHHHHCCCCEECCCCCCCCEEEEEECCCC >Mature Secondary Structure AKATHSPESGADTLLKLIASSSALEFDSEREGVWIEVIRKMDEVYSDLLRYEVDLEHKN CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC AELEEAQAFVTNVIESVSDILVVCDARGTVQQANSAFQRTSGRTLEDIAGRNIAEMIDHD CHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHCCC HHGKLAALLKPRSGAEVVDGELRFAAGGSSSDLFAINSSPRHDHRGRFIGVVLTGRPIGE CCCCEEEEECCCCCCCEECCCEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHH LRRAYEALHKAHQELQRAQRQLVEQEKMASLGRLVAGVAHELNNPISFVYGNVHTLMRYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH TALVGYLEAVHEQPVSDEVAALRKELRIDAIVEDFGPLIEGTLEGAVRISEIVKNLRRLS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKLGEVQRVNIERLINTAVLWAGRTKQHRVDIQIEVEPDLWISGNEGQLHQVIVNLVEN HHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCHHHHHHHHHHHH AIDAMRITEQPRLVVAASRQGNEIAFRVTDNGPGIDKDHLSRIFEPFFTTKRVGEGTGLG HHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE LWISYGIVREHGGELAASNESEGGATFSFTLPAA HHEEHHHHHHCCCCEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]