| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is bchE [H]
Identifier: 146338719
GI number: 146338719
Start: 1769071
End: 1770675
Strand: Direct
Name: bchE [H]
Synonym: BRADO1652
Alternate gene names: 146338719
Gene position: 1769071-1770675 (Clockwise)
Preceding gene: 146338718
Following gene: 146338720
Centisome position: 23.72
GC content: 63.93
Gene sequence:
>1605_bases GTGCGGATCTTGTTGCTGCATCCCAATTATCACTCCGGCGGCGCCGAGATCGCCGGCAACTGGCCCCCCGCCTGGGCGGC GTATATTTCCGGCGCGCTGAAGGCGGCCGGCTTCACAGACCTCCGCTTCATCGACGCGATGACCAACGATCTCTCCGAGG AGCAGGTCCGCAGCATCCTGCGCTCTGAGAAGCCGGATGTGATCGGCTGCACCGCGATCACGCCGTCGATCTACAAGGCC GAGCGGCTGCTGGAGATCGCCAAGGAGGAGCACCCGGACGCGCTGACCGTGCTCGGCGGCATCCATGCCACCTTCATGTA TCAGCAGGTGCTGACCGAAGCGCCCTGGATCGACGCGATCGTGCGCGGCGAGGGCGAGGAGATCATCGTCGACCTGATGC GCGCCCGCGAGGACGGCCGCTGGCAGAACGACCGCCGCAGCATCAAGGGCATCGCCTATCGCGACGGCGGCGAGGTCGTG GCGACCGTGGCGGCGCCGACGGTGAAGAATCTCGATGCGATCACGCCCGACTGGAGCGTGCTCGAATGGAGCAAATACAT CTACATCCCGATGAACAAGCGCGTCGCCATCCCCAACATGGCGCGCGGCTGCCCGTTCACCTGCAGCTTCTGCTCGCAGT GGAAGTTCTGGCGCGATTACCGCATCCGCGACCCGAAGAAGGTGGTCGACGAGATCGAGACCCTGATGCGCGAGCACGAT GTCGGTTTCTTCATCCTCGCCGACGAGGAGCCGACCATCAACAAGAAGAAGTTCGTGGCGTTCTGCGAGGAGCTGATCCG CCGCGACCTCAAGATCCTCTGGGGCATCAACACCCGCGTCACCGACATCCTGCGCGACGAGGCGCTGCTGCCGCTGTACC GCAAGGCCGGCCTGATCCACGTCTCGCTGGGCACGGAAGCCGCCGCGCAGATGAAGCTCGACCGCTTCAACAAGGAGACC ACGGTCGCGCAGAACAAGAAGGCGATCCAGCTGTTGCGCGATGCCGGCATCGTGGTCGAGGCGCAGTTCATCGTCGGCCT CGAGAACGAGACCCGCGAGACGCTGGAAGAGACCTACCAGATGGCGCGGGATTGGAAGCCGGATCTCGCCAACTGGGCGA TGTACACGCCGTGGCCGTTCTCCGACCTGTTCCGCGACCTCGGCGACAAGGTCGAGATCTTCGACTACGAGAAGTACAAT TTCGTCACCCCCATCATGAAGCCCGACGCGATGGACCGCGGTGAGCTGCTCGACGGCGTGATGAACAATTACCGCCGCTT CTACATGCGCAAGGCGCTGTTCTCGTACCCCTGGGCCGGCTCCGGCGAACGCAGGCGGTATCTGCTTGGCTGCCTGAAGG CGTTTCTGAAGTCCGGCTTCGAGCGCAAGTTCTACGATCTCGGCCGCGTTAACTATTGGGGGCCGCAATCCAAGGGCAAG GTCGATTTCGGCTTCGACACCTCGCGCAAGCGCGCCGAGCCCGGCAAGGTGGAATGGAAGACGAGCCATAATCGCAAGCT GAGCGGACCGCAGCAGGCGCAGGTGATGGCCTGCGGCGGCGGCACCGAGCAGATGAGCGAAGAGGCCGAGACGGGAGTGC ATTGA
Upstream 100 bases:
>100_bases CTGATTCAGCGCGATCCGCGCGGCGTTTGCGCCAGATCAATTTGTCAATCCAGCTTGACGTTAGGATGTCAGGACAAATT GATAACCGGGGGAGAACGCC
Downstream 100 bases:
>100_bases GATGCACGGCACGCGCGCCCAGCATGCTCCGCTGTCGCGCGCGGCCGCCGCCTCCGATCATGCGGCCGGGCGCATCGGCC CGAATGCCATCATTCAGACG
Product: Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit
Products: NA
Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MRILLLHPNYHSGGAEIAGNWPPAWAAYISGALKAAGFTDLRFIDAMTNDLSEEQVRSILRSEKPDVIGCTAITPSIYKA ERLLEIAKEEHPDALTVLGGIHATFMYQQVLTEAPWIDAIVRGEGEEIIVDLMRAREDGRWQNDRRSIKGIAYRDGGEVV ATVAAPTVKNLDAITPDWSVLEWSKYIYIPMNKRVAIPNMARGCPFTCSFCSQWKFWRDYRIRDPKKVVDEIETLMREHD VGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILRDEALLPLYRKAGLIHVSLGTEAAAQMKLDRFNKET TVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEETYQMARDWKPDLANWAMYTPWPFSDLFRDLGDKVEIFDYEKYN FVTPIMKPDAMDRGELLDGVMNNYRRFYMRKALFSYPWAGSGERRRYLLGCLKAFLKSGFERKFYDLGRVNYWGPQSKGK VDFGFDTSRKRAEPGKVEWKTSHNRKLSGPQQAQVMACGGGTEQMSEEAETGVH
Sequences:
>Translated_534_residues MRILLLHPNYHSGGAEIAGNWPPAWAAYISGALKAAGFTDLRFIDAMTNDLSEEQVRSILRSEKPDVIGCTAITPSIYKA ERLLEIAKEEHPDALTVLGGIHATFMYQQVLTEAPWIDAIVRGEGEEIIVDLMRAREDGRWQNDRRSIKGIAYRDGGEVV ATVAAPTVKNLDAITPDWSVLEWSKYIYIPMNKRVAIPNMARGCPFTCSFCSQWKFWRDYRIRDPKKVVDEIETLMREHD VGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILRDEALLPLYRKAGLIHVSLGTEAAAQMKLDRFNKET TVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEETYQMARDWKPDLANWAMYTPWPFSDLFRDLGDKVEIFDYEKYN FVTPIMKPDAMDRGELLDGVMNNYRRFYMRKALFSYPWAGSGERRRYLLGCLKAFLKSGFERKFYDLGRVNYWGPQSKGK VDFGFDTSRKRAEPGKVEWKTSHNRKLSGPQQAQVMACGGGTEQMSEEAETGVH >Mature_534_residues MRILLLHPNYHSGGAEIAGNWPPAWAAYISGALKAAGFTDLRFIDAMTNDLSEEQVRSILRSEKPDVIGCTAITPSIYKA ERLLEIAKEEHPDALTVLGGIHATFMYQQVLTEAPWIDAIVRGEGEEIIVDLMRAREDGRWQNDRRSIKGIAYRDGGEVV ATVAAPTVKNLDAITPDWSVLEWSKYIYIPMNKRVAIPNMARGCPFTCSFCSQWKFWRDYRIRDPKKVVDEIETLMREHD VGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILRDEALLPLYRKAGLIHVSLGTEAAAQMKLDRFNKET TVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEETYQMARDWKPDLANWAMYTPWPFSDLFRDLGDKVEIFDYEKYN FVTPIMKPDAMDRGELLDGVMNNYRRFYMRKALFSYPWAGSGERRRYLLGCLKAFLKSGFERKFYDLGRVNYWGPQSKGK VDFGFDTSRKRAEPGKVEWKTSHNRKLSGPQQAQVMACGGGTEQMSEEAETGVH
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011772 - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 61147; Mature: 61147
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLLHPNYHSGGAEIAGNWPPAWAAYISGALKAAGFTDLRFIDAMTNDLSEEQVRSIL CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH RSEKPDVIGCTAITPSIYKAERLLEIAKEEHPDALTVLGGIHATFMYQQVLTEAPWIDAI HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHH VRGEGEEIIVDLMRAREDGRWQNDRRSIKGIAYRDGGEVVATVAAPTVKNLDAITPDWSV HCCCCHHHHHHHHHHHCCCCCCCHHHHHCEEEEECCCCEEEEEECCCHHCCCCCCCCCCE LEWSKYIYIPMNKRVAIPNMARGCPFTCSFCSQWKFWRDYRIRDPKKVVDEIETLMREHD EEECCEEEEECCCEEECCCCCCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCC VGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILRDEALLPLYRKAGLIH CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCEEE VSLGTEAAAQMKLDRFNKETTVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEETYQ EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHH MARDWKPDLANWAMYTPWPFSDLFRDLGDKVEIFDYEKYNFVTPIMKPDAMDRGELLDGV HHHCCCCCHHCCCEECCCCHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHH MNNYRRFYMRKALFSYPWAGSGERRRYLLGCLKAFLKSGFERKFYDLGRVNYWGPQSKGK HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC VDFGFDTSRKRAEPGKVEWKTSHNRKLSGPQQAQVMACGGGTEQMSEEAETGVH EEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC >Mature Secondary Structure MRILLLHPNYHSGGAEIAGNWPPAWAAYISGALKAAGFTDLRFIDAMTNDLSEEQVRSIL CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH RSEKPDVIGCTAITPSIYKAERLLEIAKEEHPDALTVLGGIHATFMYQQVLTEAPWIDAI HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHH VRGEGEEIIVDLMRAREDGRWQNDRRSIKGIAYRDGGEVVATVAAPTVKNLDAITPDWSV HCCCCHHHHHHHHHHHCCCCCCCHHHHHCEEEEECCCCEEEEEECCCHHCCCCCCCCCCE LEWSKYIYIPMNKRVAIPNMARGCPFTCSFCSQWKFWRDYRIRDPKKVVDEIETLMREHD EEECCEEEEECCCEEECCCCCCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCC VGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILRDEALLPLYRKAGLIH CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCEEE VSLGTEAAAQMKLDRFNKETTVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEETYQ EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHH MARDWKPDLANWAMYTPWPFSDLFRDLGDKVEIFDYEKYNFVTPIMKPDAMDRGELLDGV HHHCCCCCHHCCCEECCCCHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHH MNNYRRFYMRKALFSYPWAGSGERRRYLLGCLKAFLKSGFERKFYDLGRVNYWGPQSKGK HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC VDFGFDTSRKRAEPGKVEWKTSHNRKLSGPQQAQVMACGGGTEQMSEEAETGVH EEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA