| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hmuO [H]
Identifier: 146338694
GI number: 146338694
Start: 1739894
End: 1740577
Strand: Direct
Name: hmuO [H]
Synonym: BRADO1626
Alternate gene names: 146338694
Gene position: 1739894-1740577 (Clockwise)
Preceding gene: 146338693
Following gene: 146338698
Centisome position: 23.33
GC content: 66.96
Gene sequence:
>684_bases ATGTTGGACCGAGTTGATTCCAATCACGTCGAAACGGCCGGGCGCACCACGCGTCCGGCCGGTCTTTTGGAAGCCATGCG CGAGCGGACCAAGACGCTGCACGTGACGGCGGAGCGGACCGGCGTCGTCGCCGAGCTGTTGCGCGGCCGCGGCACGGTGC GCGCCTATGCGCTGCTGCTGCGCAATCTGCTGCCGGTCTATGAGGCGCTCGAAGCGGAGCTCGTTCGTCATCAGGCGTCA CCGGTGGTCGGACTGACGGTGCGGCCGGAGCTGCATCGGTGTCCAGCGATCAAGGCCGATCTCGCCGCGCTCGACGCGAG CGATCTGCCGTTGCTGCCCGAGGCCATCGCCTATGTTCGCGCCATCCAGGAGGCGGGATCCGGCTCCGGTCATCCGCTGC TGGCGCACGCCTATACACGCTATCTCGGTGATCTCAGCGGCGGCCAGATCATCAAGAAGATCCTCGCCCGCTCGCTCGAA CTGCAGCCCGAGGCGCTGTCGTTCTACGAGTTTCCGGCGATCACCGACATTCCGCGCTTCAAGACCGAGTACCGCGAGGC GCTGGAGCAGGCCGGCTCGGCGATGACAGAGCATGACTCCGTCGTCGAGGAAGCGGCCACGGCTTTCCAGCTGAACATCA CGCTGTCGCAGGCGCTGCAGTCGGCCGCGGGGCTCGGCCGCTGA
Upstream 100 bases:
>100_bases CATCGGTATCCTACTGTCGGGCACCGTCGTCGACAATTGGTTCGACTGGGGCGTGAAACACGGGCTGGCGCCGCCGCGCT GAAGCTCTGCGGGTTGAGAG
Downstream 100 bases:
>100_bases AAGTTGGCCGCGTCCTCTGGACGCGCTGTTTCTTGGCTCGCATGATAGCTCGGATCCTAGCTACCGCGCTCGACCAGAGC GGTAGAGCTTGTGAGCCAAT
Product: heme oxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MLDRVDSNHVETAGRTTRPAGLLEAMRERTKTLHVTAERTGVVAELLRGRGTVRAYALLLRNLLPVYEALEAELVRHQAS PVVGLTVRPELHRCPAIKADLAALDASDLPLLPEAIAYVRAIQEAGSGSGHPLLAHAYTRYLGDLSGGQIIKKILARSLE LQPEALSFYEFPAITDIPRFKTEYREALEQAGSAMTEHDSVVEEAATAFQLNITLSQALQSAAGLGR
Sequences:
>Translated_227_residues MLDRVDSNHVETAGRTTRPAGLLEAMRERTKTLHVTAERTGVVAELLRGRGTVRAYALLLRNLLPVYEALEAELVRHQAS PVVGLTVRPELHRCPAIKADLAALDASDLPLLPEAIAYVRAIQEAGSGSGHPLLAHAYTRYLGDLSGGQIIKKILARSLE LQPEALSFYEFPAITDIPRFKTEYREALEQAGSAMTEHDSVVEEAATAFQLNITLSQALQSAAGLGR >Mature_227_residues MLDRVDSNHVETAGRTTRPAGLLEAMRERTKTLHVTAERTGVVAELLRGRGTVRAYALLLRNLLPVYEALEAELVRHQAS PVVGLTVRPELHRCPAIKADLAALDASDLPLLPEAIAYVRAIQEAGSGSGHPLLAHAYTRYLGDLSGGQIIKKILARSLE LQPEALSFYEFPAITDIPRFKTEYREALEQAGSAMTEHDSVVEEAATAFQLNITLSQALQSAAGLGR
Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennas. Upon overexpression in E.coli with PCB:ferredoxin oxidoreductase, CpeS and either CpcB or PecB permits sy
COG id: COG5398
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme oxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4504437, Length=209, Percent_Identity=39.2344497607655, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI187761311, Length=231, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25, Organism=Homo sapiens, GI187761309, Length=231, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25, Organism=Homo sapiens, GI187761307, Length=231, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25, Organism=Homo sapiens, GI8051608, Length=231, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002051 - InterPro: IPR016053 - InterPro: IPR016084 - InterPro: IPR018207 [H]
Pfam domain/function: PF01126 Heme_oxygenase [H]
EC number: =1.14.99.3 [H]
Molecular weight: Translated: 24657; Mature: 24657
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRVDSNHVETAGRTTRPAGLLEAMRERTKTLHVTAERTGVVAELLRGRGTVRAYALLL CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCHHHHHHHHH RNLLPVYEALEAELVRHQASPVVGLTVRPELHRCPAIKADLAALDASDLPLLPEAIAYVR HHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHH AIQEAGSGSGHPLLAHAYTRYLGDLSGGQIIKKILARSLELQPEALSFYEFPAITDIPRF HHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHH KTEYREALEQAGSAMTEHDSVVEEAATAFQLNITLSQALQSAAGLGR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCC >Mature Secondary Structure MLDRVDSNHVETAGRTTRPAGLLEAMRERTKTLHVTAERTGVVAELLRGRGTVRAYALLL CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCHHHHHHHHH RNLLPVYEALEAELVRHQASPVVGLTVRPELHRCPAIKADLAALDASDLPLLPEAIAYVR HHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHH AIQEAGSGSGHPLLAHAYTRYLGDLSGGQIIKKILARSLELQPEALSFYEFPAITDIPRF HHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHH KTEYREALEQAGSAMTEHDSVVEEAATAFQLNITLSQALQSAAGLGR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]