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The map label for this gene is pufM [H]

Identifier: 146338693

GI number: 146338693

Start: 1738949

End: 1739875

Strand: Direct

Name: pufM [H]

Synonym: BRADO1625

Alternate gene names: 146338693

Gene position: 1738949-1739875 (Clockwise)

Preceding gene: 146338692

Following gene: 146338694

Centisome position: 23.32

GC content: 63.43

Gene sequence:

>927_bases
ATGGCCCAATACCAGAACATCTTCACGCAGATCCAAGTTCGTAGCAAAATCTACCCGGGCATCCCGATCGAGCCCGGGGT
GTGGGAGCGGCTCGGCAAGGGCAGCTTCAACTACTGGTTCGGCAAGCTCGGCGACGCCCAGGTCGGCCCGGTCTATCTCG
GCTTCCTTGGACTGGCCTCGCTGATGTCCGGCTTCGTCGCGATCGAGATCATCGGTCTCAACATGCTGGCCTCGGTGAAC
TGGAGTCCGCTCGAGTTCATCCGTCAGTTCTTCTGGCTGTCCTTGCAGCCGCCGGCGCCGGAATACGGCCTGCAGATCTT
CCCGCCGCTGCAGGAGGGCGGCTGGTGGCTGATGGCCGGTTTCTTCCTGACGACATCGATCCTGTTGTGGTGGGCGCGCA
CCTATCGCCGCGCTCGGGCGCTCGGTCTCGGCACGCATGTGTCGTGGGCGTTCGCGTCGGCGATCTGGCTGTATCTGGTG
CTCGGCTTCATCCGGCCGATCTTCATGGGCAGCTGGAGCGAAGCGGTGCCTTTCGGCATCTTCCCGCACCTCGACTGGAC
CAACAACTTCTCCATCACCCACGGCAACCTGTTCTACAATCCGTTCCACATGCTCTCGATCGCCTTCCTGTACGGGTCGG
CGCTGCTGTTCGCGATGCATGGCGCAACGGTGCTGGCGATCAGCCGTTACGGCGGCGAGCGTGAGCTGGAGCAGATCGTC
GACCGTGGCACGGCCTTCGAACGCGGTGCGCTGTTCTGGCGCTGGACGATGGGCTTCAATGCGACGGCCGAATCGATCCA
TCGCTGGGCCTGGTGGTTCGCCGTGCTTTGCACCTTGACCGGCGGCATCGGTATCCTACTGTCGGGCACCGTCGTCGACA
ATTGGTTCGACTGGGGCGTGAAACACGGGCTGGCGCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
CGCCTGGCTGATGCCGGAAGGCAACGCCTGGTCGGATTGGTGGGAATGGTGGCGTAAGATCCCGATCTGGTCGCCGCAAT
GAGTTGAGGGAGAGGTCGTC

Downstream 100 bases:

>100_bases
AGCTCTGCGGGTTGAGAGATGTTGGACCGAGTTGATTCCAATCACGTCGAAACGGCCGGGCGCACCACGCGTCCGGCCGG
TCTTTTGGAAGCCATGCGCG

Product: photosynthetic reaction center subunit M

Products: NA

Alternate protein names: Photosynthetic reaction center M subunit [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAQYQNIFTQIQVRSKIYPGIPIEPGVWERLGKGSFNYWFGKLGDAQVGPVYLGFLGLASLMSGFVAIEIIGLNMLASVN
WSPLEFIRQFFWLSLQPPAPEYGLQIFPPLQEGGWWLMAGFFLTTSILLWWARTYRRARALGLGTHVSWAFASAIWLYLV
LGFIRPIFMGSWSEAVPFGIFPHLDWTNNFSITHGNLFYNPFHMLSIAFLYGSALLFAMHGATVLAISRYGGERELEQIV
DRGTAFERGALFWRWTMGFNATAESIHRWAWWFAVLCTLTGGIGILLSGTVVDNWFDWGVKHGLAPPR

Sequences:

>Translated_308_residues
MAQYQNIFTQIQVRSKIYPGIPIEPGVWERLGKGSFNYWFGKLGDAQVGPVYLGFLGLASLMSGFVAIEIIGLNMLASVN
WSPLEFIRQFFWLSLQPPAPEYGLQIFPPLQEGGWWLMAGFFLTTSILLWWARTYRRARALGLGTHVSWAFASAIWLYLV
LGFIRPIFMGSWSEAVPFGIFPHLDWTNNFSITHGNLFYNPFHMLSIAFLYGSALLFAMHGATVLAISRYGGERELEQIV
DRGTAFERGALFWRWTMGFNATAESIHRWAWWFAVLCTLTGGIGILLSGTVVDNWFDWGVKHGLAPPR
>Mature_307_residues
AQYQNIFTQIQVRSKIYPGIPIEPGVWERLGKGSFNYWFGKLGDAQVGPVYLGFLGLASLMSGFVAIEIIGLNMLASVNW
SPLEFIRQFFWLSLQPPAPEYGLQIFPPLQEGGWWLMAGFFLTTSILLWWARTYRRARALGLGTHVSWAFASAIWLYLVL
GFIRPIFMGSWSEAVPFGIFPHLDWTNNFSITHGNLFYNPFHMLSIAFLYGSALLFAMHGATVLAISRYGGERELEQIVD
RGTAFERGALFWRWTMGFNATAESIHRWAWWFAVLCTLTGGIGILLSGTVVDNWFDWGVKHGLAPPR

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000484
- InterPro:   IPR005781 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 34905; Mature: 34774

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYQNIFTQIQVRSKIYPGIPIEPGVWERLGKGSFNYWFGKLGDAQVGPVYLGFLGLAS
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
LMSGFVAIEIIGLNMLASVNWSPLEFIRQFFWLSLQPPAPEYGLQIFPPLQEGGWWLMAG
HHHHHHEEEEECHHHHCCCCCCHHHHHHHHHCEECCCCCCCCCCEECCCCCCCCCHHHHH
FFLTTSILLWWARTYRRARALGLGTHVSWAFASAIWLYLVLGFIRPIFMGSWSEAVPFGI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FPHLDWTNNFSITHGNLFYNPFHMLSIAFLYGSALLFAMHGATVLAISRYGGERELEQIV
CCCCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
DRGTAFERGALFWRWTMGFNATAESIHRWAWWFAVLCTLTGGIGILLSGTVVDNWFDWGV
HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
KHGLAPPR
HCCCCCCC
>Mature Secondary Structure 
AQYQNIFTQIQVRSKIYPGIPIEPGVWERLGKGSFNYWFGKLGDAQVGPVYLGFLGLAS
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
LMSGFVAIEIIGLNMLASVNWSPLEFIRQFFWLSLQPPAPEYGLQIFPPLQEGGWWLMAG
HHHHHHEEEEECHHHHCCCCCCHHHHHHHHHCEECCCCCCCCCCEECCCCCCCCCHHHHH
FFLTTSILLWWARTYRRARALGLGTHVSWAFASAIWLYLVLGFIRPIFMGSWSEAVPFGI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FPHLDWTNNFSITHGNLFYNPFHMLSIAFLYGSALLFAMHGATVLAISRYGGERELEQIV
CCCCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
DRGTAFERGALFWRWTMGFNATAESIHRWAWWFAVLCTLTGGIGILLSGTVVDNWFDWGV
HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
KHGLAPPR
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2836391; 6199280 [H]