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The map label for this gene is crtI [H]

Identifier: 146338678

GI number: 146338678

Start: 1723993

End: 1725531

Strand: Direct

Name: crtI [H]

Synonym: BRADO1610

Alternate gene names: 146338678

Gene position: 1723993-1725531 (Clockwise)

Preceding gene: 146338677

Following gene: 146338679

Centisome position: 23.12

GC content: 66.21

Gene sequence:

>1539_bases
ATGCTCGATGTCTCCCCCCTCAAAGCCGCTGTTCCGGCTGCGCTCGGAGACCGGCCGCATGCGGTTGTGATCGGCTCCGG
CTTCGGCGGCCTCGCGGCGGCGGTCCGGCTCGGCGCGCGGGGCTATCGGGTCACAGTGTTCGAGCAGCTCGATGCGCCCG
GCGGGCGCGCCTATGTGCATCGGCAGGACGGCTTCACCCTCGATGCCGGGCCGACCATCGTCACCGCGCCGTTCCTGTTC
GAGGAGCTCTGGCAGCTGTGCGGGCGGCGGATGTCCGACGATGTGACGCTCAAGCCGATCTCGCCATTCTATCGCATCCG
GTTCGACGATGGCACTATCTTCGACTGCTCGGCCGACCCGGCGGCGATGCGCGCGGAGGTGGCGAGGATTTCGCCGCGTG
ATGTCGACGGCTACGAGCGCTTCATGATGACGAGCGAGGCGATCTTCAGGAAAGGCTTCGAGGAGCTCGGCGACGTGCCG
TTCCTGTCGCTCTTCGACATGGCAAAGATCGCGCCGGCGATGATCAAGCTGCAGAGCTTTCGCTCGGTCTATGGTCTCGT
GGCGCAGCATGTGCTTGACGAGCGGCTGCGCGTCATCCTCAGCTTCCATCCGCTGCTGATCGGCGGCAACCCGTTCACGA
CCACGTCGATCTATTGCCTGATCGCCTATCTCGAGCGGCGCTGGGGCGTGCATTTCGCGATGGGCGGCACCAGCGCGCTG
GTGTCCGGACTCGTCGGCCTGATCGAAGGGCAGGGCGGCGAGGTGCGCTGTTCGGCGCCCGTGGCCGAGATCACGACGAC
AAACGGCGCTGCGACCGGCGTGCGGCTCACTTCCGGCGAGACCATCGCCGCCGATGTTGTCGTCTCCAATGGCTGCGCCG
CCTGGACCTATAAGAACCTGCTGCCATCCGTCCGGCGCCGGCGCTGGACCGATGCGCGGATCGACCGCGCGCGCTACTCG
ATGAGTCTGTTCGTCTGGTACTTCGGCACGAAGCGCCGCTATGAGGATGTCGAGCACCACACCATCCTTCTGGGCCCACG
CTATCGCGAGCTACTCGACGACATCTTCCGCCGCAAGGTGCTGGCGGATGATTTCAGCCTCTATCTACACCGGCCGACCG
CGACCGATCCGTCATTGGCGCCGAACGGATGCGATGCATTCTACGTGCTGTCTCCGGTCCCGCATCAGGAGAGCGGCATC
GATTGGACCGTCGCCGCCGAACCGTTCCGCAAGCGGATCGAGACGGCGCTGAGCCAGACACTGCTGCCCGACCTTGCAAG
CCAGATCGTCACCTCGCGGTTGCTGACGCCTGACGATTTCGAGCAGCGCCTGTCGTCCTATCGCGGCGCCGCCTTCGGGC
TCGAGCCGGTCCTGATGCAGAGCGCCTGGTTCCGTCCGCACAACAAGAGCGAAGAGGTCGAGCGGCTCTATCTGGTCGGG
GCCGGCACGCATCCCGGCGCCGGTCTGCCGGGCGTGTTGTCCTCCGCGCGCGTGCTCGATGATCTCGTACCCGCGCCGCA
TGAGCTGGAGCGCCGATGA

Upstream 100 bases:

>100_bases
CCGCCGAGCGGGCCCGAGTGCTTGCAGCGCAGCAGGAAATGTCAAACTAGATTGACGTTTTGGCTGGCGAAAGCGTCAAT
TTCAATTTACGCTTTCTGCC

Downstream 100 bases:

>100_bases
GCTGGGAAGACGATATCGCGATCTGTCGACGGATGTTGCGGGGCGGATCGAAGACGTTCTTCGCCGCCTCGAAGGTGCTG
CCCCGCGCGGTCGGCGATCC

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MLDVSPLKAAVPAALGDRPHAVVIGSGFGGLAAAVRLGARGYRVTVFEQLDAPGGRAYVHRQDGFTLDAGPTIVTAPFLF
EELWQLCGRRMSDDVTLKPISPFYRIRFDDGTIFDCSADPAAMRAEVARISPRDVDGYERFMMTSEAIFRKGFEELGDVP
FLSLFDMAKIAPAMIKLQSFRSVYGLVAQHVLDERLRVILSFHPLLIGGNPFTTTSIYCLIAYLERRWGVHFAMGGTSAL
VSGLVGLIEGQGGEVRCSAPVAEITTTNGAATGVRLTSGETIAADVVVSNGCAAWTYKNLLPSVRRRRWTDARIDRARYS
MSLFVWYFGTKRRYEDVEHHTILLGPRYRELLDDIFRRKVLADDFSLYLHRPTATDPSLAPNGCDAFYVLSPVPHQESGI
DWTVAAEPFRKRIETALSQTLLPDLASQIVTSRLLTPDDFEQRLSSYRGAAFGLEPVLMQSAWFRPHNKSEEVERLYLVG
AGTHPGAGLPGVLSSARVLDDLVPAPHELERR

Sequences:

>Translated_512_residues
MLDVSPLKAAVPAALGDRPHAVVIGSGFGGLAAAVRLGARGYRVTVFEQLDAPGGRAYVHRQDGFTLDAGPTIVTAPFLF
EELWQLCGRRMSDDVTLKPISPFYRIRFDDGTIFDCSADPAAMRAEVARISPRDVDGYERFMMTSEAIFRKGFEELGDVP
FLSLFDMAKIAPAMIKLQSFRSVYGLVAQHVLDERLRVILSFHPLLIGGNPFTTTSIYCLIAYLERRWGVHFAMGGTSAL
VSGLVGLIEGQGGEVRCSAPVAEITTTNGAATGVRLTSGETIAADVVVSNGCAAWTYKNLLPSVRRRRWTDARIDRARYS
MSLFVWYFGTKRRYEDVEHHTILLGPRYRELLDDIFRRKVLADDFSLYLHRPTATDPSLAPNGCDAFYVLSPVPHQESGI
DWTVAAEPFRKRIETALSQTLLPDLASQIVTSRLLTPDDFEQRLSSYRGAAFGLEPVLMQSAWFRPHNKSEEVERLYLVG
AGTHPGAGLPGVLSSARVLDDLVPAPHELERR
>Mature_512_residues
MLDVSPLKAAVPAALGDRPHAVVIGSGFGGLAAAVRLGARGYRVTVFEQLDAPGGRAYVHRQDGFTLDAGPTIVTAPFLF
EELWQLCGRRMSDDVTLKPISPFYRIRFDDGTIFDCSADPAAMRAEVARISPRDVDGYERFMMTSEAIFRKGFEELGDVP
FLSLFDMAKIAPAMIKLQSFRSVYGLVAQHVLDERLRVILSFHPLLIGGNPFTTTSIYCLIAYLERRWGVHFAMGGTSAL
VSGLVGLIEGQGGEVRCSAPVAEITTTNGAATGVRLTSGETIAADVVVSNGCAAWTYKNLLPSVRRRRWTDARIDRARYS
MSLFVWYFGTKRRYEDVEHHTILLGPRYRELLDDIFRRKVLADDFSLYLHRPTATDPSLAPNGCDAFYVLSPVPHQESGI
DWTVAAEPFRKRIETALSQTLLPDLASQIVTSRLLTPDDFEQRLSSYRGAAFGLEPVLMQSAWFRPHNKSEEVERLYLVG
AGTHPGAGLPGVLSSARVLDDLVPAPHELERR

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56581; Mature: 56581

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVSPLKAAVPAALGDRPHAVVIGSGFGGLAAAVRLGARGYRVTVFEQLDAPGGRAYVH
CCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEE
RQDGFTLDAGPTIVTAPFLFEELWQLCGRRMSDDVTLKPISPFYRIRFDDGTIFDCSADP
ECCCEEECCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCEEECCCCH
AAMRAEVARISPRDVDGYERFMMTSEAIFRKGFEELGDVPFLSLFDMAKIAPAMIKLQSF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RSVYGLVAQHVLDERLRVILSFHPLLIGGNPFTTTSIYCLIAYLERRWGVHFAMGGTSAL
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHH
VSGLVGLIEGQGGEVRCSAPVAEITTTNGAATGVRLTSGETIAADVVVSNGCAAWTYKNL
HHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHH
LPSVRRRRWTDARIDRARYSMSLFVWYFGTKRRYEDVEHHTILLGPRYRELLDDIFRRKV
HHHHHHHCCCHHHHHHHHHEEEEEEEEECCCHHHCCCCCCEEEECCHHHHHHHHHHHHHH
LADDFSLYLHRPTATDPSLAPNGCDAFYVLSPVPHQESGIDWTVAAEPFRKRIETALSQT
HHCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHH
LLPDLASQIVTSRLLTPDDFEQRLSSYRGAAFGLEPVLMQSAWFRPHNKSEEVERLYLVG
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEE
AGTHPGAGLPGVLSSARVLDDLVPAPHELERR
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MLDVSPLKAAVPAALGDRPHAVVIGSGFGGLAAAVRLGARGYRVTVFEQLDAPGGRAYVH
CCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEE
RQDGFTLDAGPTIVTAPFLFEELWQLCGRRMSDDVTLKPISPFYRIRFDDGTIFDCSADP
ECCCEEECCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCEEECCCCH
AAMRAEVARISPRDVDGYERFMMTSEAIFRKGFEELGDVPFLSLFDMAKIAPAMIKLQSF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RSVYGLVAQHVLDERLRVILSFHPLLIGGNPFTTTSIYCLIAYLERRWGVHFAMGGTSAL
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHH
VSGLVGLIEGQGGEVRCSAPVAEITTTNGAATGVRLTSGETIAADVVVSNGCAAWTYKNL
HHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHH
LPSVRRRRWTDARIDRARYSMSLFVWYFGTKRRYEDVEHHTILLGPRYRELLDDIFRRKV
HHHHHHHCCCHHHHHHHHHEEEEEEEEECCCHHHCCCCCCEEEECCHHHHHHHHHHHHHH
LADDFSLYLHRPTATDPSLAPNGCDAFYVLSPVPHQESGIDWTVAAEPFRKRIETALSQT
HHCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHH
LLPDLASQIVTSRLLTPDDFEQRLSSYRGAAFGLEPVLMQSAWFRPHNKSEEVERLYLVG
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEE
AGTHPGAGLPGVLSSARVLDDLVPAPHELERR
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]