| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bchO [H]
Identifier: 146338677
GI number: 146338677
Start: 1723037
End: 1723942
Strand: Direct
Name: bchO [H]
Synonym: BRADO1609
Alternate gene names: 146338677
Gene position: 1723037-1723942 (Clockwise)
Preceding gene: 146338676
Following gene: 146338678
Centisome position: 23.11
GC content: 67.77
Gene sequence:
>906_bases ATGAGTGACAAGCCGAGTTGGAGCATCGACGGCCGCACCTGGCCGAACCGCGATGCCAGCCGCTTCGTCGATGCTGGCGG CATCCGCTGGCACGTCCAGGTCATGGGCCAGGGACCCGTCGCGCTGCTGGCGCACGGCACGGGCGCCGCGACCCATTCCT GGCGCGATCTCGCGCCGCTGCTCGCCAGGCGCTTCACGATCGTCGCACCCGATCTCTCGGGCCATGGCTTTACTTCGACG CCGAATTGGCAGCGGTTGTCGCTCCCGGGCATGTCACGCGATCTCGCCACGCTTTGCGAGCAGCTTGCGATCGCGCCGGA GATCGCGATCGGTCATTCGGCGGGCGCCGCGATCCTCACCCGGATGGCGCTCGACGGCCTGATCGCGCCCAAACTGATCG TCAGCCTCAACGGCGCCTATCTGCCGTTCGGCGGCGCCGCGGCGCAATTCCTCTCGCCGCTCGCCAAGATGATGGCGCTC AACCCGCTGGTGCCGCGGCTGTTCGCCTGGCGCGGGCGGGATCCCGCGGCAGTGCATCGGCTGCTCAAGGCGACCGGGTC GACACTCGATGCCAATGGTGAGCGGCTATATGGCCGTCTCGTCGGAAGCCCCGGCCATGTCGGCGCCGCGCTTGAGATGA TGGCGAACTGGGACCTCAATCCCCTGGTGCGCGATCTGCCGAAGCTGACGACGGCGCTGCTGCTGATCGCGGCCACCCGC GACCATGCCATCACCCCCGACGTCGCCCGGCGCGTGCGCCAATTGGTCCCGCAGGCTCAACTCGAACTCATTGATGGGCT AGGTCATTTGGCTCATGAGGAGAAGCCGGCGCGGATCGCTGAGCTGATCGTCGCGGCCGCCGAGCGGGCCCGAGTGCTTG CAGCGCAGCAGGAAATGTCAAACTAG
Upstream 100 bases:
>100_bases TGATAAAGTCGTCTCGGGCTACGATGATTTCCTGGCGCGCGCCGCCGGTGCGTGAGCCGCAGCGGCGCGGCCTCGATCGC CGTGCGAACGGGGCGTCGGC
Downstream 100 bases:
>100_bases ATTGACGTTTTGGCTGGCGAAAGCGTCAATTTCAATTTACGCTTTCTGCCATGCTCGATGTCTCCCCCCTCAAAGCCGCT GTTCCGGCTGCGCTCGGAGA
Product: putative Alpha/beta hydrolase protoporphyrin IX magnesium chelatase bchO-like
Products: NA
Alternate protein names: Mg-protoporphyrin IX chelatase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSDKPSWSIDGRTWPNRDASRFVDAGGIRWHVQVMGQGPVALLAHGTGAATHSWRDLAPLLARRFTIVAPDLSGHGFTST PNWQRLSLPGMSRDLATLCEQLAIAPEIAIGHSAGAAILTRMALDGLIAPKLIVSLNGAYLPFGGAAAQFLSPLAKMMAL NPLVPRLFAWRGRDPAAVHRLLKATGSTLDANGERLYGRLVGSPGHVGAALEMMANWDLNPLVRDLPKLTTALLLIAATR DHAITPDVARRVRQLVPQAQLELIDGLGHLAHEEKPARIAELIVAAAERARVLAAQQEMSN
Sequences:
>Translated_301_residues MSDKPSWSIDGRTWPNRDASRFVDAGGIRWHVQVMGQGPVALLAHGTGAATHSWRDLAPLLARRFTIVAPDLSGHGFTST PNWQRLSLPGMSRDLATLCEQLAIAPEIAIGHSAGAAILTRMALDGLIAPKLIVSLNGAYLPFGGAAAQFLSPLAKMMAL NPLVPRLFAWRGRDPAAVHRLLKATGSTLDANGERLYGRLVGSPGHVGAALEMMANWDLNPLVRDLPKLTTALLLIAATR DHAITPDVARRVRQLVPQAQLELIDGLGHLAHEEKPARIAELIVAAAERARVLAAQQEMSN >Mature_300_residues SDKPSWSIDGRTWPNRDASRFVDAGGIRWHVQVMGQGPVALLAHGTGAATHSWRDLAPLLARRFTIVAPDLSGHGFTSTP NWQRLSLPGMSRDLATLCEQLAIAPEIAIGHSAGAAILTRMALDGLIAPKLIVSLNGAYLPFGGAAAQFLSPLAKMMALN PLVPRLFAWRGRDPAAVHRLLKATGSTLDANGERLYGRLVGSPGHVGAALEMMANWDLNPLVRDLPKLTTALLLIAATRD HAITPDVARRVRQLVPQAQLELIDGLGHLAHEEKPARIAELIVAAAERARVLAAQQEMSN
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=300, Percent_Identity=22.6666666666667, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR017497 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 32270; Mature: 32139
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPSWSIDGRTWPNRDASRFVDAGGIRWHVQVMGQGPVALLAHGTGAATHSWRDLAPL CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHH LARRFTIVAPDLSGHGFTSTPNWQRLSLPGMSRDLATLCEQLAIAPEIAIGHSAGAAILT HHHHHEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEECCCHHHHHHH RMALDGLIAPKLIVSLNGAYLPFGGAAAQFLSPLAKMMALNPLVPRLFAWRGRDPAAVHR HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH LLKATGSTLDANGERLYGRLVGSPGHVGAALEMMANWDLNPLVRDLPKLTTALLLIAATR HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC DHAITPDVARRVRQLVPQAQLELIDGLGHLAHEEKPARIAELIVAAAERARVLAAQQEMS CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC N C >Mature Secondary Structure SDKPSWSIDGRTWPNRDASRFVDAGGIRWHVQVMGQGPVALLAHGTGAATHSWRDLAPL CCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHH LARRFTIVAPDLSGHGFTSTPNWQRLSLPGMSRDLATLCEQLAIAPEIAIGHSAGAAILT HHHHHEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEECCCHHHHHHH RMALDGLIAPKLIVSLNGAYLPFGGAAAQFLSPLAKMMALNPLVPRLFAWRGRDPAAVHR HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH LLKATGSTLDANGERLYGRLVGSPGHVGAALEMMANWDLNPLVRDLPKLTTALLLIAATR HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC DHAITPDVARRVRQLVPQAQLELIDGLGHLAHEEKPARIAELIVAAAERARVLAAQQEMS CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA