| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338597
Identifier: 146338597
GI number: 146338597
Start: 1628625
End: 1629863
Strand: Direct
Name: 146338597
Synonym: BRADO1524
Alternate gene names: NA
Gene position: 1628625-1629863 (Clockwise)
Preceding gene: 146338591
Following gene: 146338598
Centisome position: 21.84
GC content: 67.64
Gene sequence:
>1239_bases GTGCACGGACCCGCCACAAGATTCGAGGAAGCGCCTCACTTCACACCGGACTCGCGCCAGGCCTGGGCGCGGCTGGCGTT GGCGCTCGTCATCGGTTCCATCGGCGGCGCGGGAATGTGGACCGTGGTGGTCGTGCTGCCGACCGTGCAGGCGGAATACG CCGCGAGCCGCGGTGCGGTCTCGCTGGCCTATACGCTCACGATGTTCGGCTTCGGACTCGGCGGCGTGATCGTCGGCCGC ATCACCGACCGCTTCGGCATCGTGACCGCGATGGCGCTCAGCATCGCGACGACTGCTGCAGCCTATCTGCTCGCCGGCGC GTCGGTGACGCTGTGGCAGTTCCAGGCGGTGTACTTCCTGATCGGGCTCGGCTCGTCCGTCACGTTCGCGCCGCTGATGG CCGAAGCCTCGCATTGGTTCGAGCGCTATCGCGGGCTTGCGGTCACCATCGTCGCATCCGGCAATTACGTCGCCGGCACG GTGTGGCCGCCGCTGGTGAATTACGGCGTGCAGCAGATCGGCTGGCGCGCCACTCATGTCGCGCTCGGCGTGTTCTGCGC GGTGACGATGTCAGCGCTGCTCCTGGTGCTGCGGGCGCGGATGGGCGGCTCCGGTGCGCATGATCACAGCCAGGCGGCGC CACCGCAATTGACGCTGCCGATCTCCACTAACGCGCTGACCGTGCTGCTGAGCATCGCCGCGATCGCCTGCTGCGTGGCG ATGGCGATGCCGCAGGTGCATATCGTCGCCTATTGCGGCGATCTCGGTTACGGCGTGGCCGTCGGCGCGCAGATGCTGTC GCTGATGATGGCGCTGGGCATCGTCAGCCGCATCGGCTCCGGCTTCCTCGCCGACCGCGTCGGCGGCATGCGCACGCTGC TGATCGGCTCGCTCGCGCAGGGCTTTGCGCTGCTGTTCTATCTGTTCTTCGATGGCCTGACGTCGCTGTACCTGATCTCC GGCATGTTCGGCCTGTTCCAGGGCGGCATCGTTCCGAGCTACGCGATCATCGTGCGCGAGGCGATGCCCGCGCGCGAGGC GGCGACCCGCGTGGGCATCATCATCTTCGCCTCGGTGTTCGGCATGTCATTCGGCGGCTGGGTGTCCGGCGTGATCTTCG ATGCCACCGGATCCTACGCCGCGGCGTTCGCCAATGGCATCGCCTGGAATGCGCTCAACCTCGCCATCGTGGTCACGCTG CTGATCCTGGCCCGGCGGCCACACCGGCTGACCGCCTGA
Upstream 100 bases:
>100_bases ACGATCGGCCGAAGCACCTCTGTTGCGCTGCTTCTGCATGGCGTCTGCCGCAGCATTGCGGCTTGACCGCGCGACATGTG GCGACGAAGTTGCGGCCATC
Downstream 100 bases:
>100_bases CCGGACAATCGTTGCTCATCGGCAACAGTTGGACCCTATCGTGCGCCATATGCACGCTGTCGTACAAAATCCCGGCTTCC GCCGCAAAACCATCGAATCC
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Transporter Facilitator Family; Facilitator Superfamily Transporter; Oxalate/Formate Antiporter; Transporter Protein; Twin-Arginine Translocation Pathway Signal; Transmembrane Transporter; MFS Family Transporter; Oxalate/Formate Antiporter Protein
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MHGPATRFEEAPHFTPDSRQAWARLALALVIGSIGGAGMWTVVVVLPTVQAEYAASRGAVSLAYTLTMFGFGLGGVIVGR ITDRFGIVTAMALSIATTAAAYLLAGASVTLWQFQAVYFLIGLGSSVTFAPLMAEASHWFERYRGLAVTIVASGNYVAGT VWPPLVNYGVQQIGWRATHVALGVFCAVTMSALLLVLRARMGGSGAHDHSQAAPPQLTLPISTNALTVLLSIAAIACCVA MAMPQVHIVAYCGDLGYGVAVGAQMLSLMMALGIVSRIGSGFLADRVGGMRTLLIGSLAQGFALLFYLFFDGLTSLYLIS GMFGLFQGGIVPSYAIIVREAMPAREAATRVGIIIFASVFGMSFGGWVSGVIFDATGSYAAAFANGIAWNALNLAIVVTL LILARRPHRLTA
Sequences:
>Translated_412_residues MHGPATRFEEAPHFTPDSRQAWARLALALVIGSIGGAGMWTVVVVLPTVQAEYAASRGAVSLAYTLTMFGFGLGGVIVGR ITDRFGIVTAMALSIATTAAAYLLAGASVTLWQFQAVYFLIGLGSSVTFAPLMAEASHWFERYRGLAVTIVASGNYVAGT VWPPLVNYGVQQIGWRATHVALGVFCAVTMSALLLVLRARMGGSGAHDHSQAAPPQLTLPISTNALTVLLSIAAIACCVA MAMPQVHIVAYCGDLGYGVAVGAQMLSLMMALGIVSRIGSGFLADRVGGMRTLLIGSLAQGFALLFYLFFDGLTSLYLIS GMFGLFQGGIVPSYAIIVREAMPAREAATRVGIIIFASVFGMSFGGWVSGVIFDATGSYAAAFANGIAWNALNLAIVVTL LILARRPHRLTA >Mature_412_residues MHGPATRFEEAPHFTPDSRQAWARLALALVIGSIGGAGMWTVVVVLPTVQAEYAASRGAVSLAYTLTMFGFGLGGVIVGR ITDRFGIVTAMALSIATTAAAYLLAGASVTLWQFQAVYFLIGLGSSVTFAPLMAEASHWFERYRGLAVTIVASGNYVAGT VWPPLVNYGVQQIGWRATHVALGVFCAVTMSALLLVLRARMGGSGAHDHSQAAPPQLTLPISTNALTVLLSIAAIACCVA MAMPQVHIVAYCGDLGYGVAVGAQMLSLMMALGIVSRIGSGFLADRVGGMRTLLIGSLAQGFALLFYLFFDGLTSLYLIS GMFGLFQGGIVPSYAIIVREAMPAREAATRVGIIIFASVFGMSFGGWVSGVIFDATGSYAAAFANGIAWNALNLAIVVTL LILARRPHRLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI291621700, Length=373, Percent_Identity=24.9329758713137, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43153; Mature: 43153
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGPATRFEEAPHFTPDSRQAWARLALALVIGSIGGAGMWTVVVVLPTVQAEYAASRGAV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCCH SLAYTLTMFGFGLGGVIVGRITDRFGIVTAMALSIATTAAAYLLAGASVTLWQFQAVYFL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IGLGSSVTFAPLMAEASHWFERYRGLAVTIVASGNYVAGTVWPPLVNYGVQQIGWRATHV HHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCHHHHHHHHHHHCCHHHHH ALGVFCAVTMSALLLVLRARMGGSGAHDHSQAAPPQLTLPISTNALTVLLSIAAIACCVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH MAMPQVHIVAYCGDLGYGVAVGAQMLSLMMALGIVSRIGSGFLADRVGGMRTLLIGSLAQ HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH GFALLFYLFFDGLTSLYLISGMFGLFQGGIVPSYAIIVREAMPAREAATRVGIIIFASVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GMSFGGWVSGVIFDATGSYAAAFANGIAWNALNLAIVVTLLILARRPHRLTA HCCCCCHHHCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHGPATRFEEAPHFTPDSRQAWARLALALVIGSIGGAGMWTVVVVLPTVQAEYAASRGAV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCCH SLAYTLTMFGFGLGGVIVGRITDRFGIVTAMALSIATTAAAYLLAGASVTLWQFQAVYFL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IGLGSSVTFAPLMAEASHWFERYRGLAVTIVASGNYVAGTVWPPLVNYGVQQIGWRATHV HHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCHHHHHHHHHHHCCHHHHH ALGVFCAVTMSALLLVLRARMGGSGAHDHSQAAPPQLTLPISTNALTVLLSIAAIACCVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH MAMPQVHIVAYCGDLGYGVAVGAQMLSLMMALGIVSRIGSGFLADRVGGMRTLLIGSLAQ HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH GFALLFYLFFDGLTSLYLISGMFGLFQGGIVPSYAIIVREAMPAREAATRVGIIIFASVF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GMSFGGWVSGVIFDATGSYAAAFANGIAWNALNLAIVVTLLILARRPHRLTA HCCCCCHHHCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA