| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338598
Identifier: 146338598
GI number: 146338598
Start: 1630414
End: 1631514
Strand: Direct
Name: 146338598
Synonym: BRADO1526
Alternate gene names: NA
Gene position: 1630414-1631514 (Clockwise)
Preceding gene: 146338597
Following gene: 146338600
Centisome position: 21.87
GC content: 63.94
Gene sequence:
>1101_bases ATGCCCGGCAGCGGTCCGGACGTGTGGCGGCTGCCCAATCCGAACGACGTCAACGACGGCACCGTCACCATCATCACCGC GCCGGCGGGCGGCGCGACCTCGGTGTTCGGCTCGGACATGGCGCGCGTGCTCGACGATCAGACCAATGTCCGCGTGCTGC CGGTGCTCGGCAAGGGACCGGTTCGCAACGTCTCCGACATTCTCTTCTTGAAGAGCATCGACATGGGCGCGGTCGCGGCC GACGTGCCCGAATTCTACCGCCTGCAATACGGCATTCCCGATATCACGTCGCAGCTGCGCTACATCGCGCGGCTCTATCA CAACGAGGTCCACATCATCGCGCGGTCGTCGATCCGCTCGATCTTCGATCTCAACGGCAAGCGCATCATCGCACCCACCG ATGTCGGCTTCTATTCGGCGCGCGTGATCTTCAACCGGCTCGGCCTGACGGCGTCGTTCGACTACGCGACCGATGATGCG AAGTCGATCCAGAAGCTCATCGACGGCGAGGCCGATGCGTACGTCGTCTCGACCGGCAAGGTGTTCCAGCTCGCCCGCAA CATCCGCAACGAGAACCGCGCGCTGCATCTGGTCACGATCCCCTATGACCGCAGGCTGCAGGATCTCTATCTGCCGACGA CCTTATCGTCGGAGGAATATCCGAACCTGCTCAATCCCGGCGAGACGATCGAGACCGTGGCGATCGGCATGCTGCTCGTC AGCTACAACTGGCCTGAGAATACCGAGCGCTATCGCAAGGTCGCGCGCTTCGTCGAGGCGTTCTTCGCCAACTACGATGA GTTCATGAAGCCTCCGCGACATCCGAAATGGAAGGAGTCGAGCATCGTCGCCACGATCCCAGGCTGGAAGCGCTTCAAGG CCGCGGACGACTGGCTGCTCGCGCGCAACATGATGCCGCGGCCGCAGGCCGCCGACGTGTCGCGGCCGCAGGTCGCCGAC GTCCAGCAGCAACAGTTCGAGAACTTCGTGCGCCAGACCGGCGGGCAGGTCTCGAATGATCCGGCCGAGCGCAGCGCGTT GTTCCGGCAATTCCTTCAATGGCGCCAGCAGCACGGCGGCCCGCCGACACCGACGCGGTAA
Upstream 100 bases:
>100_bases CATCATCGTTCCGGTGGCGCCATCCGCGGGCAAGCCGAACGGCGCCGCAGCACAGCCCGCGCCGCCGCGTCCCGCGGGCT TGCCGGCCTCTCTGTCCCCG
Downstream 100 bases:
>100_bases CGGCGCGCGCCGCGGTCAGACGGATTGTCCGGCCTTCAGCAGGGAGCATCCGGTGATCTTGAGGCTGCCGTCGGGCTGTG TCTGCAGCGTATAGAGCGCC
Product: putative TRAP-type transport system
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPGSGPDVWRLPNPNDVNDGTVTIITAPAGGATSVFGSDMARVLDDQTNVRVLPVLGKGPVRNVSDILFLKSIDMGAVAA DVPEFYRLQYGIPDITSQLRYIARLYHNEVHIIARSSIRSIFDLNGKRIIAPTDVGFYSARVIFNRLGLTASFDYATDDA KSIQKLIDGEADAYVVSTGKVFQLARNIRNENRALHLVTIPYDRRLQDLYLPTTLSSEEYPNLLNPGETIETVAIGMLLV SYNWPENTERYRKVARFVEAFFANYDEFMKPPRHPKWKESSIVATIPGWKRFKAADDWLLARNMMPRPQAADVSRPQVAD VQQQQFENFVRQTGGQVSNDPAERSALFRQFLQWRQQHGGPPTPTR
Sequences:
>Translated_366_residues MPGSGPDVWRLPNPNDVNDGTVTIITAPAGGATSVFGSDMARVLDDQTNVRVLPVLGKGPVRNVSDILFLKSIDMGAVAA DVPEFYRLQYGIPDITSQLRYIARLYHNEVHIIARSSIRSIFDLNGKRIIAPTDVGFYSARVIFNRLGLTASFDYATDDA KSIQKLIDGEADAYVVSTGKVFQLARNIRNENRALHLVTIPYDRRLQDLYLPTTLSSEEYPNLLNPGETIETVAIGMLLV SYNWPENTERYRKVARFVEAFFANYDEFMKPPRHPKWKESSIVATIPGWKRFKAADDWLLARNMMPRPQAADVSRPQVAD VQQQQFENFVRQTGGQVSNDPAERSALFRQFLQWRQQHGGPPTPTR >Mature_365_residues PGSGPDVWRLPNPNDVNDGTVTIITAPAGGATSVFGSDMARVLDDQTNVRVLPVLGKGPVRNVSDILFLKSIDMGAVAAD VPEFYRLQYGIPDITSQLRYIARLYHNEVHIIARSSIRSIFDLNGKRIIAPTDVGFYSARVIFNRLGLTASFDYATDDAK SIQKLIDGEADAYVVSTGKVFQLARNIRNENRALHLVTIPYDRRLQDLYLPTTLSSEEYPNLLNPGETIETVAIGMLLVS YNWPENTERYRKVARFVEAFFANYDEFMKPPRHPKWKESSIVATIPGWKRFKAADDWLLARNMMPRPQAADVSRPQVADV QQQQFENFVRQTGGQVSNDPAERSALFRQFLQWRQQHGGPPTPTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41242; Mature: 41111
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGSGPDVWRLPNPNDVNDGTVTIITAPAGGATSVFGSDMARVLDDQTNVRVLPVLGKGP CCCCCCCEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC VRNVSDILFLKSIDMGAVAADVPEFYRLQYGIPDITSQLRYIARLYHNEVHIIARSSIRS CCCHHHHHHHHCCCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHH IFDLNGKRIIAPTDVGFYSARVIFNRLGLTASFDYATDDAKSIQKLIDGEADAYVVSTGK HHHCCCCEEEECCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCCCCCEEEEECHH VFQLARNIRNENRALHLVTIPYDRRLQDLYLPTTLSSEEYPNLLNPGETIETVAIGMLLV HHHHHHHHCCCCCEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHE SYNWPENTERYRKVARFVEAFFANYDEFMKPPRHPKWKESSIVATIPGWKRFKAADDWLL ECCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCHHHH ARNMMPRPQAADVSRPQVADVQQQQFENFVRQTGGQVSNDPAERSALFRQFLQWRQQHGG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC PPTPTR CCCCCC >Mature Secondary Structure PGSGPDVWRLPNPNDVNDGTVTIITAPAGGATSVFGSDMARVLDDQTNVRVLPVLGKGP CCCCCCEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC VRNVSDILFLKSIDMGAVAADVPEFYRLQYGIPDITSQLRYIARLYHNEVHIIARSSIRS CCCHHHHHHHHCCCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHH IFDLNGKRIIAPTDVGFYSARVIFNRLGLTASFDYATDDAKSIQKLIDGEADAYVVSTGK HHHCCCCEEEECCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCCCCCEEEEECHH VFQLARNIRNENRALHLVTIPYDRRLQDLYLPTTLSSEEYPNLLNPGETIETVAIGMLLV HHHHHHHHCCCCCEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHE SYNWPENTERYRKVARFVEAFFANYDEFMKPPRHPKWKESSIVATIPGWKRFKAADDWLL ECCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCHHHH ARNMMPRPQAADVSRPQVADVQQQQFENFVRQTGGQVSNDPAERSALFRQFLQWRQQHGG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC PPTPTR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA