| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338347
Identifier: 146338347
GI number: 146338347
Start: 1340346
End: 1341878
Strand: Direct
Name: 146338347
Synonym: BRADO1255
Alternate gene names: NA
Gene position: 1340346-1341878 (Clockwise)
Preceding gene: 146338346
Following gene: 146338348
Centisome position: 17.98
GC content: 63.93
Gene sequence:
>1533_bases GTGCGGGATGTGGGATGGGGATGTGGGGCCAACACCACCCACGAGAGTTCGTGGACGAGGCGCAGCTTCGAATTTTGCCT GTCGACGATGTCGCCGACGCATCCGCAGGTCAGTCACCCCCGGAGGAAGACGCCCGACGGGCCATGCCTGAGTCCATTTG GCCGCGAGTCGCCGGTCACCCGCAAGATCAACGAACACATCCTAAGCAGAGGAGTTCATCTCATGTTCAAATACGCGCCA CCGGCGAACATCGACGATCTTGCCGGACGTCCGTCCCGAGCGGCTTTCCTCGAGGATTGGCACAAACGTATTCAAGACGC GTTCGACGACGAAATCAGCAATCTGCCGTCCGGCAACAAGCTATTCTTCTCCGAGACTGCGAGCGCGGCCGAGAGCGCCG ATATCGCGGTCACGTGGAACGCCTTTCCGCTCGTCATCAAGCGTGAACAGCCGGCCGATGTGGCGCGTTGGGATGCGGCA GACCGATTGGCCCGCGTGAACCGCGCACCGGCCGGCGCGCCCGCGTTGAACATGCCGTGCCGGCGCCAGGACGAGTACTG TGAATGGTTTGCCTATCGCGCATCTCCGGGGGGGCCGATCAGTCGCATCGTCTTCACCGCGGAAGCTCCAGAATACTGGA TAGACTTGGCGCGACACGACTTCGACTGTGTGGTCGAACTCTATCGGCGCCATGTCTCGACGCAAGTTCAGCCCGACGAC TTGAAGCTGACGCAGGACATCGCGTTCGGAAATGAGATGCTCCCGAAGGGCAGCTACAATCCCTACAATCCATGGAACAC CACCAAAGGGGTGATGCATCTCACCCACCCCGCGAACACGCTCGGGGCGGAGATCGACCTCGCGGCACGCGCCACGATTC CTCGCCACGACGTGAGCGGTAAGAGGATCACGGAGGTGCGACGGTTCGCCTGCGGGTCGAATTTCGGGGATCCCAACCGC AGCAGCGATCCGAATATCGGCCTCGGCGTGAACCTCACCGTGTTGGCGACGACGCCGGACGCCAGGCCGCAATCCATCAC GCTCGCCAACCCGGTGGCGCTGTATATCGATCGGATCGCTGCGGGAGTCCTCACCGACGCGGATGACAATCCGCTCCAGG GCTGGTTCAAGATCGTGCGTGGTGTCGCGGGCCGCGGGCTGATGGCGGTCTTGGAGCCGCCGGAGGGGGCCGCATTCGGG CTCGACAGCGTACAGGTCATCGGCCGCAGGCTCACTCATGGCGGCCAGGTGGCGGACCACATTCAGATGGTCCTCTATGC CAAGACCGCCCATCTCGGAGCCGCGGCGCCGACCCTGCGCAGCTGTATCTCCCATTGCTGCCGGCCGGAGAACGTGCTGC CGATCGATCAGGTCAATCTCGATCACAAGGACCCGACCGATGGCTGCGGGGCGTCGGCCAAGGACCCGTTTCCGGAGCTC GTTGGTGCCGGCGCCGCGCCGGATCTGGTGGCGCTGAGGGCGAGACCGTCGTCGGTCAAACGAGCGGGCCGCCTCCTGCG CGTGAGTGAGTGA
Upstream 100 bases:
>100_bases GGTCGGTGAAGCTGCCACCAGCGGGCTGCTCGCCGCGCAAACGCTGGCGCGTGCACGATTGCCCCGGATGCATCTCGGTT GATCCACGTAGAACCTTCCC
Downstream 100 bases:
>100_bases GCCATGGCCGCCGCTCAAGAACCGCTGCTCGACGCGGCCGACATCCAGGGAAACATCCTGCCCGGCTTCAGTCGGCAGCA GCAGTACTTCGTCGCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MRDVGWGCGANTTHESSWTRRSFEFCLSTMSPTHPQVSHPRRKTPDGPCLSPFGRESPVTRKINEHILSRGVHLMFKYAP PANIDDLAGRPSRAAFLEDWHKRIQDAFDDEISNLPSGNKLFFSETASAAESADIAVTWNAFPLVIKREQPADVARWDAA DRLARVNRAPAGAPALNMPCRRQDEYCEWFAYRASPGGPISRIVFTAEAPEYWIDLARHDFDCVVELYRRHVSTQVQPDD LKLTQDIAFGNEMLPKGSYNPYNPWNTTKGVMHLTHPANTLGAEIDLAARATIPRHDVSGKRITEVRRFACGSNFGDPNR SSDPNIGLGVNLTVLATTPDARPQSITLANPVALYIDRIAAGVLTDADDNPLQGWFKIVRGVAGRGLMAVLEPPEGAAFG LDSVQVIGRRLTHGGQVADHIQMVLYAKTAHLGAAAPTLRSCISHCCRPENVLPIDQVNLDHKDPTDGCGASAKDPFPEL VGAGAAPDLVALRARPSSVKRAGRLLRVSE
Sequences:
>Translated_510_residues MRDVGWGCGANTTHESSWTRRSFEFCLSTMSPTHPQVSHPRRKTPDGPCLSPFGRESPVTRKINEHILSRGVHLMFKYAP PANIDDLAGRPSRAAFLEDWHKRIQDAFDDEISNLPSGNKLFFSETASAAESADIAVTWNAFPLVIKREQPADVARWDAA DRLARVNRAPAGAPALNMPCRRQDEYCEWFAYRASPGGPISRIVFTAEAPEYWIDLARHDFDCVVELYRRHVSTQVQPDD LKLTQDIAFGNEMLPKGSYNPYNPWNTTKGVMHLTHPANTLGAEIDLAARATIPRHDVSGKRITEVRRFACGSNFGDPNR SSDPNIGLGVNLTVLATTPDARPQSITLANPVALYIDRIAAGVLTDADDNPLQGWFKIVRGVAGRGLMAVLEPPEGAAFG LDSVQVIGRRLTHGGQVADHIQMVLYAKTAHLGAAAPTLRSCISHCCRPENVLPIDQVNLDHKDPTDGCGASAKDPFPEL VGAGAAPDLVALRARPSSVKRAGRLLRVSE >Mature_510_residues MRDVGWGCGANTTHESSWTRRSFEFCLSTMSPTHPQVSHPRRKTPDGPCLSPFGRESPVTRKINEHILSRGVHLMFKYAP PANIDDLAGRPSRAAFLEDWHKRIQDAFDDEISNLPSGNKLFFSETASAAESADIAVTWNAFPLVIKREQPADVARWDAA DRLARVNRAPAGAPALNMPCRRQDEYCEWFAYRASPGGPISRIVFTAEAPEYWIDLARHDFDCVVELYRRHVSTQVQPDD LKLTQDIAFGNEMLPKGSYNPYNPWNTTKGVMHLTHPANTLGAEIDLAARATIPRHDVSGKRITEVRRFACGSNFGDPNR SSDPNIGLGVNLTVLATTPDARPQSITLANPVALYIDRIAAGVLTDADDNPLQGWFKIVRGVAGRGLMAVLEPPEGAAFG LDSVQVIGRRLTHGGQVADHIQMVLYAKTAHLGAAAPTLRSCISHCCRPENVLPIDQVNLDHKDPTDGCGASAKDPFPEL VGAGAAPDLVALRARPSSVKRAGRLLRVSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55778; Mature: 55778
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVGWGCGANTTHESSWTRRSFEFCLSTMSPTHPQVSHPRRKTPDGPCLSPFGRESPVT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RKINEHILSRGVHLMFKYAPPANIDDLAGRPSRAAFLEDWHKRIQDAFDDEISNLPSGNK HHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE LFFSETASAAESADIAVTWNAFPLVIKREQPADVARWDAADRLARVNRAPAGAPALNMPC EEEECCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC RRQDEYCEWFAYRASPGGPISRIVFTAEAPEYWIDLARHDFDCVVELYRRHVSTQVQPDD CCCHHHHHHEEEECCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC LKLTQDIAFGNEMLPKGSYNPYNPWNTTKGVMHLTHPANTLGAEIDLAARATIPRHDVSG CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCEEEEHEECCCCCCCCCC KRITEVRRFACGSNFGDPNRSSDPNIGLGVNLTVLATTPDARPQSITLANPVALYIDRIA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHH AGVLTDADDNPLQGWFKIVRGVAGRGLMAVLEPPEGAAFGLDSVQVIGRRLTHGGQVADH HHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEECCHHHHHHHHHHCCCCHHHHH IQMVLYAKTAHLGAAAPTLRSCISHCCRPENVLPIDQVNLDHKDPTDGCGASAKDPFPEL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH VGAGAAPDLVALRARPSSVKRAGRLLRVSE HCCCCCCCEEEECCCCHHHHHHCCEEEECC >Mature Secondary Structure MRDVGWGCGANTTHESSWTRRSFEFCLSTMSPTHPQVSHPRRKTPDGPCLSPFGRESPVT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RKINEHILSRGVHLMFKYAPPANIDDLAGRPSRAAFLEDWHKRIQDAFDDEISNLPSGNK HHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE LFFSETASAAESADIAVTWNAFPLVIKREQPADVARWDAADRLARVNRAPAGAPALNMPC EEEECCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC RRQDEYCEWFAYRASPGGPISRIVFTAEAPEYWIDLARHDFDCVVELYRRHVSTQVQPDD CCCHHHHHHEEEECCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC LKLTQDIAFGNEMLPKGSYNPYNPWNTTKGVMHLTHPANTLGAEIDLAARATIPRHDVSG CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCEEEEHEECCCCCCCCCC KRITEVRRFACGSNFGDPNRSSDPNIGLGVNLTVLATTPDARPQSITLANPVALYIDRIA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHH AGVLTDADDNPLQGWFKIVRGVAGRGLMAVLEPPEGAAFGLDSVQVIGRRLTHGGQVADH HHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEECCHHHHHHHHHHCCCCHHHHH IQMVLYAKTAHLGAAAPTLRSCISHCCRPENVLPIDQVNLDHKDPTDGCGASAKDPFPEL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH VGAGAAPDLVALRARPSSVKRAGRLLRVSE HCCCCCCCEEEECCCCHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA