| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338348
Identifier: 146338348
GI number: 146338348
Start: 1341882
End: 1343447
Strand: Direct
Name: 146338348
Synonym: BRADO1256
Alternate gene names: NA
Gene position: 1341882-1343447 (Clockwise)
Preceding gene: 146338347
Following gene: 146338349
Centisome position: 18.0
GC content: 65.84
Gene sequence:
>1566_bases ATGGCCGCCGCTCAAGAACCGCTGCTCGACGCGGCCGACATCCAGGGAAACATCCTGCCCGGCTTCAGTCGGCAGCAGCA GTACTTCGTCGCGTTCTCCTGTGACCGAAAGGACGCGCTGCAAGCGGTCCTTGCAGAGTTGCCGCGGCCGACGCCTCTGT CGACCGTTCTAGGGCATCGGGACGATCGCAAGGCCGCCTTCATGTCGGGCGAGCCCCGTCCGCAGCGCGATGACCTTTGG CTCAACCTTGCGCTTGGTCCGAATGCGACCGATGCGCTCGGCGCACCGCAGGTGCGGCAGCTCGACAGTGCCTTCAACGC GGGCATGAGGACCGGCATCACCGGCGACCCGACGGCCCCCGTTCTGCCCGACGGCAAGCCCAACCCTTCATCTCGCGATC ACTGGCTCGTGGGGGCGCCGTCGAAACCGGTCGACCTCCTGCTGATCTTCGCGCACGACGGCAATATCGTCGATGAAGCG GCGCCCATCGTCGATCGGGTGAGCGAGATCATCGGCGCCGCGCCGAACTACGTTGAGCCCGCGGCGATGCTGCCGGGCAG CGTCGAGCATTTTGGTTTTCGCGACGGCATCTCCCAGCCGGGGGTACGCGGCCGCATCGTGCAGGATGGCGCCGAGAGGT TCATCACGACCCGCTATGGTGTGCCGTCGCAGAACGACATCGATTTCGGCAAGCCGGGGCAGCCGCTTGTTTGGCCCGGC CAGTTTCTCGCCGGGCAACCGCGCTTTGAGGGCGACACGTCCGTGCTCGCGCCTGAGCTGACGAACGGCTCTTTCCTGGT CTTCCGCCGCCTGAGGCAGGACGTGGCGGCCTTCGAAAGCGACACGCAAGCGATGGCGCTGGCGCTCGGCGACGCTGGCG GCCGCCCGATCCCAGCCGAGCATCTGCGAGCACTCATCGTCGGCCGCCATCGTTCCGGCAATGCAATCATGCGCGGCGGC GCCGCGACCGCGCAGGCCGATGACCCGAACGCAATCAACTATTTTTCGTTCGCGAATGCGCTCCCGGCGATCAGCCTGGA TGACGGGACGCAGGTCTCTGGGTCGCTTGCTGATCCCGATCCGGCGATCGGCCGGTTGTGTCCCGCTTGGGCCCATATCA GGAAGGTGAATCCGCGCGATCTCCAGACCGATCGGGGCGGGGCGCTGACGACCCTGGGATTCCAAATGCTGAGACGCGGC ATTCCCTTCGGGCCGCCGTTCGACCGCGATAACCCCCAGGCGCCCGTCAACGCGGAGGATCGCGGGCTCCTATTCGTGTC CTATCAGCGCGCCATCGACGATCAGTTTGGCAGTCTTAACCGCGGCTGGATGAACAACCCCAACGCTCCGACCGCCGGAG GTTTCGATCTACTCGTCGGTCAGAACGTCGATCCGGCAACCCGCCTGCATACGCCGAAGCCTGCGTCGTTCTTCGGCCTT GATACCGGCGGGACGGCGCTTCCCTTCGCCGCGCCCAATCAATGGGTCATTCCGACCGGCGGGGCGTTCCTGTTCGCCCC CTCAGTCGCTTTCATCGACGAATTTGCAGCTCCGCGCATTGCGTGA
Upstream 100 bases:
>100_bases GCTCGTTGGTGCCGGCGCCGCGCCGGATCTGGTGGCGCTGAGGGCGAGACCGTCGTCGGTCAAACGAGCGGGCCGCCTCC TGCGCGTGAGTGAGTGAGCC
Downstream 100 bases:
>100_bases GCGGTCGCGCTCACCGGAATCGCGAATGGAATAATGAGTTCACCAAAAGGAGGTTGATATGCGCTTTGCCACCCATGTCA TGACGTGTTTCATCACAGCG
Product: peroxidase
Products: NA
Alternate protein names: Dyp-Type Peroxidase Family Protein; Dyp-Type Peroxidase Family; Iron-Dependent Peroxidase-Like Protein; Peroxidase Family Protein; Peroxidase Protein; Cytochrome; Dyp-Type Peroxidase
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MAAAQEPLLDAADIQGNILPGFSRQQQYFVAFSCDRKDALQAVLAELPRPTPLSTVLGHRDDRKAAFMSGEPRPQRDDLW LNLALGPNATDALGAPQVRQLDSAFNAGMRTGITGDPTAPVLPDGKPNPSSRDHWLVGAPSKPVDLLLIFAHDGNIVDEA APIVDRVSEIIGAAPNYVEPAAMLPGSVEHFGFRDGISQPGVRGRIVQDGAERFITTRYGVPSQNDIDFGKPGQPLVWPG QFLAGQPRFEGDTSVLAPELTNGSFLVFRRLRQDVAAFESDTQAMALALGDAGGRPIPAEHLRALIVGRHRSGNAIMRGG AATAQADDPNAINYFSFANALPAISLDDGTQVSGSLADPDPAIGRLCPAWAHIRKVNPRDLQTDRGGALTTLGFQMLRRG IPFGPPFDRDNPQAPVNAEDRGLLFVSYQRAIDDQFGSLNRGWMNNPNAPTAGGFDLLVGQNVDPATRLHTPKPASFFGL DTGGTALPFAAPNQWVIPTGGAFLFAPSVAFIDEFAAPRIA
Sequences:
>Translated_521_residues MAAAQEPLLDAADIQGNILPGFSRQQQYFVAFSCDRKDALQAVLAELPRPTPLSTVLGHRDDRKAAFMSGEPRPQRDDLW LNLALGPNATDALGAPQVRQLDSAFNAGMRTGITGDPTAPVLPDGKPNPSSRDHWLVGAPSKPVDLLLIFAHDGNIVDEA APIVDRVSEIIGAAPNYVEPAAMLPGSVEHFGFRDGISQPGVRGRIVQDGAERFITTRYGVPSQNDIDFGKPGQPLVWPG QFLAGQPRFEGDTSVLAPELTNGSFLVFRRLRQDVAAFESDTQAMALALGDAGGRPIPAEHLRALIVGRHRSGNAIMRGG AATAQADDPNAINYFSFANALPAISLDDGTQVSGSLADPDPAIGRLCPAWAHIRKVNPRDLQTDRGGALTTLGFQMLRRG IPFGPPFDRDNPQAPVNAEDRGLLFVSYQRAIDDQFGSLNRGWMNNPNAPTAGGFDLLVGQNVDPATRLHTPKPASFFGL DTGGTALPFAAPNQWVIPTGGAFLFAPSVAFIDEFAAPRIA >Mature_520_residues AAAQEPLLDAADIQGNILPGFSRQQQYFVAFSCDRKDALQAVLAELPRPTPLSTVLGHRDDRKAAFMSGEPRPQRDDLWL NLALGPNATDALGAPQVRQLDSAFNAGMRTGITGDPTAPVLPDGKPNPSSRDHWLVGAPSKPVDLLLIFAHDGNIVDEAA PIVDRVSEIIGAAPNYVEPAAMLPGSVEHFGFRDGISQPGVRGRIVQDGAERFITTRYGVPSQNDIDFGKPGQPLVWPGQ FLAGQPRFEGDTSVLAPELTNGSFLVFRRLRQDVAAFESDTQAMALALGDAGGRPIPAEHLRALIVGRHRSGNAIMRGGA ATAQADDPNAINYFSFANALPAISLDDGTQVSGSLADPDPAIGRLCPAWAHIRKVNPRDLQTDRGGALTTLGFQMLRRGI PFGPPFDRDNPQAPVNAEDRGLLFVSYQRAIDDQFGSLNRGWMNNPNAPTAGGFDLLVGQNVDPATRLHTPKPASFFGLD TGGTALPFAAPNQWVIPTGGAFLFAPSVAFIDEFAAPRIA
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55588; Mature: 55457
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAQEPLLDAADIQGNILPGFSRQQQYFVAFSCDRKDALQAVLAELPRPTPLSTVLGHR CCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCC DDRKAAFMSGEPRPQRDDLWLNLALGPNATDALGAPQVRQLDSAFNAGMRTGITGDPTAP CCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC VLPDGKPNPSSRDHWLVGAPSKPVDLLLIFAHDGNIVDEAAPIVDRVSEIIGAAPNYVEP CCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC AAMLPGSVEHFGFRDGISQPGVRGRIVQDGAERFITTRYGVPSQNDIDFGKPGQPLVWPG HHHCCCCHHHCCCCCCCCCCCCCCEEHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEECC QFLAGQPRFEGDTSVLAPELTNGSFLVFRRLRQDVAAFESDTQAMALALGDAGGRPIPAE HHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH HLRALIVGRHRSGNAIMRGGAATAQADDPNAINYFSFANALPAISLDDGTQVSGSLADPD HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHCCCEEECCCCCCCCCCCCCCC PAIGRLCPAWAHIRKVNPRDLQTDRGGALTTLGFQMLRRGIPFGPPFDRDNPQAPVNAED HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC RGLLFVSYQRAIDDQFGSLNRGWMNNPNAPTAGGFDLLVGQNVDPATRLHTPKPASFFGL CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCEEEE DTGGTALPFAAPNQWVIPTGGAFLFAPSVAFIDEFAAPRIA CCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCCCC >Mature Secondary Structure AAAQEPLLDAADIQGNILPGFSRQQQYFVAFSCDRKDALQAVLAELPRPTPLSTVLGHR CCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCC DDRKAAFMSGEPRPQRDDLWLNLALGPNATDALGAPQVRQLDSAFNAGMRTGITGDPTAP CCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC VLPDGKPNPSSRDHWLVGAPSKPVDLLLIFAHDGNIVDEAAPIVDRVSEIIGAAPNYVEP CCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC AAMLPGSVEHFGFRDGISQPGVRGRIVQDGAERFITTRYGVPSQNDIDFGKPGQPLVWPG HHHCCCCHHHCCCCCCCCCCCCCCEEHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEECC QFLAGQPRFEGDTSVLAPELTNGSFLVFRRLRQDVAAFESDTQAMALALGDAGGRPIPAE HHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH HLRALIVGRHRSGNAIMRGGAATAQADDPNAINYFSFANALPAISLDDGTQVSGSLADPD HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHCCCEEECCCCCCCCCCCCCCC PAIGRLCPAWAHIRKVNPRDLQTDRGGALTTLGFQMLRRGIPFGPPFDRDNPQAPVNAED HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC RGLLFVSYQRAIDDQFGSLNRGWMNNPNAPTAGGFDLLVGQNVDPATRLHTPKPASFFGL CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCEEEE DTGGTALPFAAPNQWVIPTGGAFLFAPSVAFIDEFAAPRIA CCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA